Tolmetin_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tolmetin perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tolmetin_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha 0.097271
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0910045
RPL3 ribosomal protein L3 0.0866304
MYH9 myosin, heavy chain 9, non-muscle 0.0858165
TMSB10 thymosin beta 10 0.0824093
ANKRD11 ankyrin repeat domain 11 0.0775957
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0675504
TMSB4X thymosin beta 4, X-linked 0.0674711
KDM3A lysine (K)-specific demethylase 3A 0.0671617
EIF1 eukaryotic translation initiation factor 1 0.0647983
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0605315
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0588754
RNF145 ring finger protein 145 0.0549529
RPS12 ribosomal protein S12 0.0542385
RPS2 ribosomal protein S2 0.0536311
KRT8 keratin 8, type II 0.0508463
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0504785
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0498539
EREG epiregulin 0.0488916
GRB10 growth factor receptor-bound protein 10 0.048217
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0479477
RPL13A ribosomal protein L13a 0.0477409
RPS19 ribosomal protein S19 0.0460671
ZFAND3 zinc finger, AN1-type domain 3 0.0424852
KRT18 keratin 18, type I 0.0404612
RPL26 ribosomal protein L26 0.0403059
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0388317
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0387948
RPS3 ribosomal protein S3 0.0376555
HSPA8 heat shock 70kDa protein 8 0.0374804
RBM39 RNA binding motif protein 39 0.0362497
WAC WW domain containing adaptor with coiled-coil 0.0345878
FAM13A family with sequence similarity 13, member A 0.0339671
XPO1 exportin 1 0.033294
SRRM2 serine/arginine repetitive matrix 2 0.033152
RPL23 ribosomal protein L23 0.0330261
EPS8 epidermal growth factor receptor pathway substrate 8 0.0329792
NAP1L1 nucleosome assembly protein 1-like 1 0.0324775
MYO5B myosin VB 0.0320605
MIER1 mesoderm induction early response 1, transcriptional regulator 0.0316307
RAD21 RAD21 homolog (S. pombe) 0.0314163
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0313079
RPL37A ribosomal protein L37a 0.0312388
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0310379
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0308818
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0307111
YME1L1 YME1-like 1 ATPase 0.0302518
NUP58 nucleoporin 58 0.0300384
PRRC2C proline-rich coiled-coil 2C 0.0294971
OSBPL3 oxysterol binding protein-like 3 0.0291671
NAMPT nicotinamide phosphoribosyltransferase 0.0290576
RPS15A ribosomal protein S15a 0.0288761
RPL35A ribosomal protein L35a 0.0288606
ARGLU1 arginine and glutamate rich 1 0.0287191
HYOU1 hypoxia up-regulated 1 0.0284726
KDM6A lysine (K)-specific demethylase 6A 0.0281646
RAD23B RAD23 homolog B (S. cerevisiae) 0.027752
MARCHF6 membrane associated ring-CH-type finger 6 0.0270189
PDIA6 protein disulfide isomerase family A, member 6 0.0269895
S100P S100 calcium binding protein P 0.0263519
BCAT1 branched chain amino-acid transaminase 1, cytosolic 0.0263485
RPL35 ribosomal protein L35 0.0262646
LCORL ligand dependent nuclear receptor corepressor-like 0.0261738
RPL4 ribosomal protein L4 0.026068
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0257758
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0257593
FXR1 fragile X mental retardation, autosomal homolog 1 0.0255565
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 0.0252993
B2M beta-2-microglobulin 0.0252667
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0247991
H2AC6 H2A clustered histone 6 0.0247482
GARS1 glycyl-tRNA synthetase 1 0.0246666
RPL34 ribosomal protein L34 0.0245893
PNN pinin, desmosome associated protein 0.0244973
SET SET nuclear proto-oncogene 0.0243185
CALR calreticulin 0.0241579
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.024151
XPOT exportin, tRNA 0.024092
CCNY cyclin Y 0.0240564
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0239779
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0238668
YTHDC1 YTH domain containing 1 0.0238227
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0237733
RPSA ribosomal protein SA 0.0237587
COG5 component of oligomeric golgi complex 5 0.0231907
RSRC2 arginine/serine-rich coiled-coil 2 0.0230533
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0230459
RPL36 ribosomal protein L36 0.0230223
EIF4A1 eukaryotic translation initiation factor 4A1 0.0229376
H1-4 H1.4 linker histone, cluster member 0.0229309
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.0229118
MED13L mediator complex subunit 13-like 0.0229072
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0228121
TIAL1 TIA1 cytotoxic granule-associated RNA binding protein-like 1 0.0227631
LAMB3 laminin, beta 3 0.0226553
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0226551
TFG TRK-fused gene 0.0224236
RAB6A RAB6A, member RAS oncogene family 0.0222984
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0219145
CNOT2 CCR4-NOT transcription complex, subunit 2 0.0217494

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.385662
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.173554
CEMIP cell migration inducing protein, hyaluronan binding -0.124948
MUC6 mucin 6, oligomeric mucus/gel-forming -0.11529
ANXA2 annexin A2 -0.081859
MYO1E myosin IE -0.0806842
TRIM2 tripartite motif containing 2 -0.0788912
NDRG1 N-myc downstream regulated 1 -0.0781419
LDHA lactate dehydrogenase A -0.0775487
ANTXR2 anthrax toxin receptor 2 -0.076568
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0708165
FAT1 FAT atypical cadherin 1 -0.0667626
EZR ezrin -0.0567715
CADPS Ca++-dependent secretion activator -0.0565075
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.052638
PTEN phosphatase and tensin homolog -0.0520491
LMO7 LIM domain 7 -0.0515228
TXNIP thioredoxin interacting protein -0.050085
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0492187
ATXN1 ataxin 1 -0.0489741
PTBP3 polypyrimidine tract binding protein 3 -0.048035
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0474975
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0470405
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.046936
TNS4 tensin 4 -0.0459845
ITGA6 integrin, alpha 6 -0.0456518
MBD5 methyl-CpG binding domain protein 5 -0.0437142
PERP PERP, TP53 apoptosis effector -0.0431199
FHIT fragile histidine triad -0.0410586
RNF43 ring finger protein 43 -0.0406572
NPSR1 neuropeptide S receptor 1 -0.0402684
GMDS GDP-mannose 4,6-dehydratase -0.0385546
DSG2 desmoglein 2 -0.0381694
AKAP9 A kinase (PRKA) anchor protein 9 -0.0372561
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0369364
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0368263
KDM4C lysine (K)-specific demethylase 4C -0.0365079
PATJ PATJ crumbs cell polarity complex component -0.0360074
BTG1 B-cell translocation gene 1, anti-proliferative -0.035497
CD44 CD44 molecule (Indian blood group) -0.0353407
SBF2 SET binding factor 2 -0.0352039
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.03464
POTEF POTE ankyrin domain family, member F -0.0346242
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0334535
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide -0.033367
TPM4 tropomyosin 4 -0.0329405
ATP5F1B ATP synthase F1 subunit beta -0.0329122
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0327098
MUC13 mucin 13, cell surface associated -0.032419
LOC102724023 ES1 protein homolog, mitochondrial -0.0320498
CD46 CD46 molecule, complement regulatory protein -0.0318025
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 -0.0317228
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0316073
MYO1D myosin ID -0.0313588
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0313478
MED13 mediator complex subunit 13 -0.031065
SH3D19 SH3 domain containing 19 -0.0309473
ZBTB20 zinc finger and BTB domain containing 20 -0.0309275
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0307116
GOLGB1 golgin B1 -0.0301423
KAZN kazrin, periplakin interacting protein -0.0301136
TBC1D5 TBC1 domain family, member 5 -0.0301077
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0300741
ARHGAP26 Rho GTPase activating protein 26 -0.0299472
CALB1 calbindin 1, 28kDa -0.0297403
ESYT2 extended synaptotagmin-like protein 2 -0.0296064
KIAA1217 KIAA1217 -0.0294843
FOS FBJ murine osteosarcoma viral oncogene homolog -0.029419
CCNI cyclin I -0.0292104
TMEM45B transmembrane protein 45B -0.0289609
PTPRR protein tyrosine phosphatase, receptor type, R -0.0289517
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.0288698
CMIP c-Maf inducing protein -0.028549
SPON1 spondin 1, extracellular matrix protein -0.0282916
NEBL nebulette -0.0281622
CDCP1 CUB domain containing protein 1 -0.0280698
RHPN2 rhophilin, Rho GTPase binding protein 2 -0.0277091
INSIG1 insulin induced gene 1 -0.0275114
SMYD3 SET and MYND domain containing 3 -0.0272584
EHF ets homologous factor -0.0271257
BAZ2B bromodomain adjacent to zinc finger domain, 2B -0.0266761
ITGB4 integrin, beta 4 -0.0266168
KRT19 keratin 19, type I -0.0263949
PRSS3 protease, serine, 3 -0.0263082
ARHGAP32 Rho GTPase activating protein 32 -0.0260557
USP34 ubiquitin specific peptidase 34 -0.02578
CCND1 cyclin D1 -0.0256618
HMGA1 high mobility group AT-hook 1 -0.0255683
FHL2 four and a half LIM domains 2 -0.0255568
FTH1 ferritin, heavy polypeptide 1 -0.0252378
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0246394
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0245054
PPARG peroxisome proliferator-activated receptor gamma -0.0243983
ABHD2 abhydrolase domain containing 2 -0.0241795
FOXO1 forkhead box O1 -0.0240892
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1 -0.0239599
KLF3 Kruppel-like factor 3 (basic) -0.0238968
KLF5 Kruppel-like factor 5 (intestinal) -0.0238947
FERMT1 fermitin family member 1 -0.0237653
PTCH1 patched 1 -0.0237652