Tolmetin_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tolmetin perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tolmetin_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TMSB4X thymosin beta 4, X-linked 0.133011
RPL3 ribosomal protein L3 0.108919
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0907947
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0864168
SRRM2 serine/arginine repetitive matrix 2 0.0821481
DSCAM Down syndrome cell adhesion molecule 0.0752345
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0658187
ADAM10 ADAM metallopeptidase domain 10 0.0645527
NUP58 nucleoporin 58 0.0642888
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0539228
EZR ezrin 0.053674
KDM3A lysine (K)-specific demethylase 3A 0.0532887
CAMTA1 calmodulin binding transcription activator 1 0.0528098
MYH9 myosin, heavy chain 9, non-muscle 0.0519222
RPS2 ribosomal protein S2 0.0518526
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0502559
PCBP2 poly(rC) binding protein 2 0.0493817
NCKAP1 NCK-associated protein 1 0.0489274
KDM6A lysine (K)-specific demethylase 6A 0.0466018
PDGFC platelet derived growth factor C 0.0465162
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0464597
ENO1 enolase 1, (alpha) 0.0460166
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0442933
UBA6 ubiquitin-like modifier activating enzyme 6 0.042945
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0426914
ANKRD11 ankyrin repeat domain 11 0.0421066
SET SET nuclear proto-oncogene 0.0415308
NAMPT nicotinamide phosphoribosyltransferase 0.0415232
ZNF292 zinc finger protein 292 0.0398093
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0395971
CCNL1 cyclin L1 0.0388896
FNDC3B fibronectin type III domain containing 3B 0.0379558
ZFAND3 zinc finger, AN1-type domain 3 0.0372036
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0371813
PRRC2C proline-rich coiled-coil 2C 0.0359862
KMT2E lysine (K)-specific methyltransferase 2E 0.0359744
KMT2C lysine (K)-specific methyltransferase 2C 0.0359703
ADAM9 ADAM metallopeptidase domain 9 0.0358649
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0358321
SBF2 SET binding factor 2 0.0354789
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0353441
PTK2 protein tyrosine kinase 2 0.0353428
ZNF148 zinc finger protein 148 0.0346473
GOLGA4 golgin A4 0.0344539
RNF145 ring finger protein 145 0.034395
EIF4A2 eukaryotic translation initiation factor 4A2 0.0341979
MSN moesin 0.0341717
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0339749
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0336858
SETD5 SET domain containing 5 0.0335224
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0331386
ARGLU1 arginine and glutamate rich 1 0.033115
ELP2 elongator acetyltransferase complex subunit 2 0.0323973
TOP2B topoisomerase (DNA) II beta 180kDa 0.0323372
PRPF38B pre-mRNA processing factor 38B 0.0321222
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0320247
PDS5B PDS5 cohesin associated factor B 0.0317714
INSIG2 insulin induced gene 2 0.0312748
RPS18 ribosomal protein S18 0.0311719
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.03105
RAD23B RAD23 homolog B (S. cerevisiae) 0.0309945
DST dystonin 0.0308986
PNN pinin, desmosome associated protein 0.0306808
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0300492
XPOT exportin, tRNA 0.0297483
CHD7 chromodomain helicase DNA binding protein 7 0.0296603
WAC WW domain containing adaptor with coiled-coil 0.0295608
MED13L mediator complex subunit 13-like 0.0291605
SAMD4A sterile alpha motif domain containing 4A 0.0290929
RBM26 RNA binding motif protein 26 0.0290375
RBM39 RNA binding motif protein 39 0.0290186
PDIA6 protein disulfide isomerase family A, member 6 0.0290067
CSDE1 cold shock domain containing E1, RNA-binding 0.0287841
ECPAS Ecm29 proteasome adaptor and scaffold 0.0287658
CNOT6L CCR4-NOT transcription complex, subunit 6-like 0.0285771
HDGF hepatoma-derived growth factor 0.0285225
PRELID2 PRELI domain containing 2 0.0283584
YME1L1 YME1-like 1 ATPase 0.0282298
RAB6A RAB6A, member RAS oncogene family 0.0281902
LOXL3 lysyl oxidase-like 3 0.0280305
SNX9 sorting nexin 9 0.027972
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0279366
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0278201
EIF1 eukaryotic translation initiation factor 1 0.0273422
EIF4A1 eukaryotic translation initiation factor 4A1 0.027162
RPS3 ribosomal protein S3 0.0271588
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0270507
ZEB1 zinc finger E-box binding homeobox 1 0.0270155
TPI1 triosephosphate isomerase 1 0.0268526
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0268245
ELOVL5 ELOVL fatty acid elongase 5 0.0267262
TMEM65 transmembrane protein 65 0.0265905
SSBP2 single-stranded DNA binding protein 2 0.0263865
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0259141
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0258512
MXI1 MAX interactor 1, dimerization protein 0.0258147
SP3 Sp3 transcription factor 0.0257864
KDM4C lysine (K)-specific demethylase 4C 0.0256244
RIOK3 RIO kinase 3 0.0255064
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0254707

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.371705
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.181014
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.123324
CPED1 cadherin-like and PC-esterase domain containing 1 -0.122264
PDE4D phosphodiesterase 4D, cAMP-specific -0.0780214
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0770948
FOXP1 forkhead box P1 -0.0733069
TPT1 tumor protein, translationally-controlled 1 -0.0724228
CCND1 cyclin D1 -0.0723473
BMP10 bone morphogenetic protein 10 -0.062494
PTMA prothymosin, alpha -0.0602275
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0595006
RPS6 ribosomal protein S6 -0.0569289
RPLP1 ribosomal protein, large, P1 -0.0545469
LDHA lactate dehydrogenase A -0.0492917
ACTG1 actin gamma 1 -0.049157
NBEA neurobeachin -0.0472373
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 -0.0446228
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 -0.044455
S100A6 S100 calcium binding protein A6 -0.0408085
RPS8 ribosomal protein S8 -0.0399881
DLG1 discs, large homolog 1 (Drosophila) -0.0398292
EXT1 exostosin glycosyltransferase 1 -0.038611
RAB7A RAB7A, member RAS oncogene family -0.0376171
PDE4B phosphodiesterase 4B, cAMP-specific -0.0365457
RPL28 ribosomal protein L28 -0.0351965
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0340372
EGFR epidermal growth factor receptor -0.0333363
MYO5C myosin VC -0.0327075
LOC112694756 uncharaterized LOC112694756 -0.0320749
RFC3 replication factor C (activator 1) 3, 38kDa -0.0316015
S100A9 S100 calcium binding protein A9 -0.0312222
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0308755
RPL34 ribosomal protein L34 -0.0306859
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0305092
S100A4 S100 calcium binding protein A4 -0.0303316
RPS13 ribosomal protein S13 -0.0299842
RPS24 ribosomal protein S24 -0.0299077
RPL27A ribosomal protein L27a -0.0298354
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0287222
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.027597
ZBTB20 zinc finger and BTB domain containing 20 -0.027533
DUSP6 dual specificity phosphatase 6 -0.0274435
HSPB1 heat shock 27kDa protein 1 -0.0273679
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0273553
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0270592
GNAS GNAS complex locus -0.0268851
RPLP0 ribosomal protein, large, P0 -0.0267709
PRUNE2 prune homolog 2 (Drosophila) -0.0264493
AHNAK AHNAK nucleoprotein -0.0261495
FUS FUS RNA binding protein -0.025959
NIPBL Nipped-B homolog (Drosophila) -0.0256375
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0253853
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0253172
NT5C2 5'-nucleotidase, cytosolic II -0.0249575
IFI16 interferon, gamma-inducible protein 16 -0.0245114
RPL38 ribosomal protein L38 -0.0244677
RPL36A ribosomal protein L36a -0.024293
HEG1 heart development protein with EGF-like domains 1 -0.0240793
AHI1 Abelson helper integration site 1 -0.0240716
HLA-B major histocompatibility complex, class I, B -0.023786
CYB5B cytochrome b5 type B (outer mitochondrial membrane) -0.0236524
NFIA nuclear factor I/A -0.0236352
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.023619
NAV2 neuron navigator 2 -0.0235546
FTL ferritin, light polypeptide -0.0233649
SMC4 structural maintenance of chromosomes 4 -0.0232138
SCLT1 sodium channel and clathrin linker 1 -0.0231963
HJURP Holliday junction recognition protein -0.0231132
DIAPH3 diaphanous-related formin 3 -0.0229505
S100A10 S100 calcium binding protein A10 -0.0225056
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0224381
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0223172
ZMYND8 zinc finger, MYND-type containing 8 -0.0223018
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0222686
BSG basigin (Ok blood group) -0.0222378
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0222222
CCNI cyclin I -0.0221854
RPL35A ribosomal protein L35a -0.0221519
LOC102724023 ES1 protein homolog, mitochondrial -0.021874
CUX1 cut-like homeobox 1 -0.0217993
USP15 ubiquitin specific peptidase 15 -0.0214509
RPL31 ribosomal protein L31 -0.0212523
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0212024
SPRY4 sprouty homolog 4 (Drosophila) -0.0209562
ATG7 autophagy related 7 -0.0209091
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 -0.0208482
TUBB4B tubulin, beta 4B class IVb -0.0208151
TTC28 tetratricopeptide repeat domain 28 -0.0207125
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0205823
HSPH1 heat shock 105kDa/110kDa protein 1 -0.0205328
SPRY2 sprouty homolog 2 (Drosophila) -0.0204092
CENATAC centrosomal AT-AC splicing factor -0.0201469
RPS25 ribosomal protein S25 -0.0201337
TASOR2 transcription activation suppressor family member 2 -0.0199729
SSH2 slingshot protein phosphatase 2 -0.0199506
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0199353
RPL19 ribosomal protein L19 -0.0198048
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0197807
RPS16 ribosomal protein S16 -0.0195888