Tolmetin_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tolmetin perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tolmetin_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MYH9 myosin, heavy chain 9, non-muscle 0.0809176
EFNA5 ephrin-A5 0.0676033
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0598977
FAM13A family with sequence similarity 13, member A 0.0519806
PDE4D phosphodiesterase 4D, cAMP-specific 0.0509871
TRIO trio Rho guanine nucleotide exchange factor 0.0502653
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.049763
SON SON DNA binding protein 0.0477622
EXT1 exostosin glycosyltransferase 1 0.0464534
CENPE centromere protein E, 312kDa 0.0444131
AHNAK AHNAK nucleoprotein 0.0440573
TRA2A transformer 2 alpha homolog (Drosophila) 0.0419698
FNDC3B fibronectin type III domain containing 3B 0.0412212
MSN moesin 0.0408295
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0404186
PRRC2C proline-rich coiled-coil 2C 0.039559
RBM39 RNA binding motif protein 39 0.039368
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0385588
LOX lysyl oxidase 0.0370339
RASA2 RAS p21 protein activator 2 0.036261
PTMA prothymosin, alpha 0.0358695
ASPH aspartate beta-hydroxylase 0.0357597
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0347089
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0337854
OXSR1 oxidative stress responsive 1 0.0333832
TMF1 TATA element modulatory factor 1 0.0333807
FAM20C family with sequence similarity 20, member C 0.0332013
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0330964
FBXL7 F-box and leucine-rich repeat protein 7 0.0329725
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0328808
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0328116
LIMCH1 LIM and calponin homology domains 1 0.0327909
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0322913
CENPF centromere protein F, 350/400kDa 0.0318975
TNIP1 TNFAIP3 interacting protein 1 0.0315539
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0311779
NAV2 neuron navigator 2 0.0311384
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 0.0310796
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0308647
ANLN anillin, actin binding protein 0.0308573
SKIC3 SKI3 subunit of superkiller complex 0.0307888
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0307574
KDM4C lysine (K)-specific demethylase 4C 0.0303484
ADAM9 ADAM metallopeptidase domain 9 0.0297737
SUCO SUN domain containing ossification factor 0.0293522
TNS3 tensin 3 0.0290994
RUNX2 runt-related transcription factor 2 0.0284056
ARRDC3 arrestin domain containing 3 0.0281615
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0277304
PTBP2 polypyrimidine tract binding protein 2 0.0274669
ATG7 autophagy related 7 0.0273942
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0273514
CADM1 cell adhesion molecule 1 0.0272972
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0270594
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0270115
PRKCA protein kinase C, alpha 0.0268174
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0266481
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0265757
BLCAP bladder cancer associated protein 0.0264149
PRELID2 PRELI domain containing 2 0.026396
BCLAF1 BCL2-associated transcription factor 1 0.0261799
RPL3 ribosomal protein L3 0.0260368
ARID2 AT rich interactive domain 2 (ARID, RFX-like) 0.0260116
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0259797
KANSL1 KAT8 regulatory NSL complex subunit 1 0.025789
IL1RAP interleukin 1 receptor accessory protein 0.0256585
EP300 E1A binding protein p300 0.0253791
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 0.0252799
AUH AU RNA binding protein/enoyl-CoA hydratase 0.0252305
SFXN1 sideroflexin 1 0.024969
PTPRD protein tyrosine phosphatase, receptor type, D 0.024787
ESYT2 extended synaptotagmin-like protein 2 0.0245872
TENM2 teneurin transmembrane protein 2 0.0245568
PLEC plectin 0.024493
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 0.0242949
C1S complement component 1, s subcomponent 0.0242651
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0242496
B2M beta-2-microglobulin 0.0241649
CAVIN1 caveolae associated protein 1 0.0239874
TMED9 transmembrane emp24 protein transport domain containing 9 0.0238957
FAT1 FAT atypical cadherin 1 0.0238585
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.0235739
MYO10 myosin X 0.0235554
BIRC3 baculoviral IAP repeat containing 3 0.0235482
RANBP2 RAN binding protein 2 0.023432
MATR3 matrin 3 0.0233884
UIMC1 ubiquitin interaction motif containing 1 0.0233864
INSIG2 insulin induced gene 2 0.0233839
IL6ST interleukin 6 signal transducer 0.023322
SYNGAP1 synaptic Ras GTPase activating protein 1 0.0232523
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.023126
PUM2 pumilio RNA-binding family member 2 0.0230661
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0228927
FUS FUS RNA binding protein 0.0227183
COL4A2 collagen, type IV, alpha 2 0.0226948
MED13L mediator complex subunit 13-like 0.0226402
WNT5A wingless-type MMTV integration site family, member 5A 0.0225949
URI1 URI1, prefoldin-like chaperone 0.0223932
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0223834
PRPF8 pre-mRNA processing factor 8 0.0223667

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.24461
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.145846
TIMP3 TIMP metallopeptidase inhibitor 3 -0.14204
MT2A metallothionein 2A -0.122249
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.106903
TMSB10 thymosin beta 10 -0.105268
HLA-B major histocompatibility complex, class I, B -0.100825
FN1 fibronectin 1 -0.10081
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0951298
COL6A1 collagen, type VI, alpha 1 -0.0830689
NDRG1 N-myc downstream regulated 1 -0.0828434
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0801023
FTH1 ferritin, heavy polypeptide 1 -0.0694043
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0689055
TGFBI transforming growth factor, beta-induced, 68kDa -0.0657706
POTEF POTE ankyrin domain family, member F -0.0636723
EGR1 early growth response 1 -0.0633848
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0607172
ELL2 elongation factor, RNA polymerase II, 2 -0.0565899
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0564922
COL1A2 collagen, type I, alpha 2 -0.0543309
RTN4 reticulon 4 -0.0535471
CALD1 caldesmon 1 -0.0535081
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0527736
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0495439
FTL ferritin, light polypeptide -0.0494112
HM13 histocompatibility (minor) 13 -0.0493452
MEF2A myocyte enhancer factor 2A -0.0472023
PDIA6 protein disulfide isomerase family A, member 6 -0.0447623
STC1 stanniocalcin 1 -0.0446883
FAM133B family with sequence similarity 133, member B -0.0443313
DLG1 discs, large homolog 1 (Drosophila) -0.044305
ENO1 enolase 1, (alpha) -0.0439863
ZNF395 zinc finger protein 395 -0.0403604
CD44 CD44 molecule (Indian blood group) -0.0398991
TENT5A terminal nucleotidyltransferase 5A -0.0398213
NAV1 neuron navigator 1 -0.0395082
VIM vimentin -0.0394048
CALU calumenin -0.0391761
NRXN3 neurexin 3 -0.038833
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0386338
KMT2C lysine (K)-specific methyltransferase 2C -0.0381303
EGFR epidermal growth factor receptor -0.0378506
PICALM phosphatidylinositol binding clathrin assembly protein -0.0374825
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.036445
OAF OAF homolog (Drosophila) -0.0364154
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0357336
PSD3 pleckstrin and Sec7 domain containing 3 -0.034966
RPL34 ribosomal protein L34 -0.0349454
LUC7L2 LUC7-like 2 (S. cerevisiae) -0.0345351
TM9SF4 transmembrane 9 superfamily protein member 4 -0.0337813
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0337381
RPS3 ribosomal protein S3 -0.0335673
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0329225
HMGA2 high mobility group AT-hook 2 -0.0324925
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0324047
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase -0.032287
SETX senataxin -0.0322869
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0321303
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0321144
CA12 carbonic anhydrase XII -0.0320786
CLTC clathrin, heavy chain (Hc) -0.0320493
RAP1B RAP1B, member of RAS oncogene family -0.0318747
CAPN2 calpain 2, (m/II) large subunit -0.0314381
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0311355
SRP54 signal recognition particle 54kDa -0.0307008
CLIC4 chloride intracellular channel 4 -0.0306473
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0301648
UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) -0.0297161
ALCAM activated leukocyte cell adhesion molecule -0.029643
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0294757
AOPEP aminopeptidase O (putative) -0.0293797
MYO1E myosin IE -0.0292458
LMNA lamin A/C -0.0291591
SYNPO synaptopodin -0.0291007
THBS1 thrombospondin 1 -0.0290897
TPM1 tropomyosin 1 (alpha) -0.0289264
RPLP1 ribosomal protein, large, P1 -0.0289173
SAR1A secretion associated, Ras related GTPase 1A -0.0287361
MYOF myoferlin -0.0285664
ACBD3 acyl-CoA binding domain containing 3 -0.0284788
ANXA2 annexin A2 -0.0284036
CDK6 cyclin-dependent kinase 6 -0.028295
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0280072
AK1 adenylate kinase 1 -0.0280068
PCNX1 pecanex 1 -0.0279526
NF1 neurofibromin 1 -0.027791
CTSB cathepsin B -0.027361
AGRN agrin -0.0272749
CLIP2 CAP-GLY domain containing linker protein 2 -0.0271924
JUN jun proto-oncogene -0.0269012
RC3H1 ring finger and CCCH-type domains 1 -0.0261345
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0261265
BPTF bromodomain PHD finger transcription factor -0.0260438
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0259406
PARD3 par-3 family cell polarity regulator -0.0258126
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0256916
NBEAL1 neurobeachin-like 1 -0.0256257
TPM4 tropomyosin 4 -0.0256006
LDHA lactate dehydrogenase A -0.0255349