Tomivosertib_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tomivosertib perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tomivosertib_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TLE4 transducin-like enhancer of split 4 0.145404
VCL vinculin 0.134452
EIF1 eukaryotic translation initiation factor 1 0.0751052
ZSWIM6 zinc finger, SWIM-type containing 6 0.0750845
AKAP12 A kinase (PRKA) anchor protein 12 0.0736699
VMP1 vacuole membrane protein 1 0.0728086
FERMT2 fermitin family member 2 0.0673558
PTPRD protein tyrosine phosphatase, receptor type, D 0.0636111
LIMA1 LIM domain and actin binding 1 0.0607339
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.0583909
GLCCI1 glucocorticoid induced 1 0.0535259
SCN9A sodium channel, voltage gated, type IX alpha subunit 0.0518025
MBD5 methyl-CpG binding domain protein 5 0.0510678
RPS6 ribosomal protein S6 0.0475159
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0458563
FNDC3A fibronectin type III domain containing 3A 0.0431305
PLPP1 phospholipid phosphatase 1 0.0419306
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0405055
BPTF bromodomain PHD finger transcription factor 0.0401221
SYNPO2 synaptopodin 2 0.0378473
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0374055
RPS12 ribosomal protein S12 0.0364756
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0358679
DPH6 diphthamine biosynthesis 6 0.0353909
GATA3 GATA binding protein 3 0.0350073
TPST1 tyrosylprotein sulfotransferase 1 0.0343138
TIMP2 TIMP metallopeptidase inhibitor 2 0.0338829
MEIS2 Meis homeobox 2 0.0336598
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0333056
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0329335
ZBTB20 zinc finger and BTB domain containing 20 0.0318406
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0318404
STXBP4 syntaxin binding protein 4 0.0306774
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0303655
SYT1 synaptotagmin I 0.0303102
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0286274
HILPDA hypoxia inducible lipid droplet-associated 0.0285108
SLIT2 slit homolog 2 (Drosophila) 0.0267253
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0261785
GREM2 gremlin 2, DAN family BMP antagonist 0.026115
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0260508
EGR1 early growth response 1 0.0252653
HOMER1 homer scaffolding protein 1 0.0247205
SIK2 salt-inducible kinase 2 0.024067
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0239602
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0238592
CALD1 caldesmon 1 0.0235896
RPLP0 ribosomal protein, large, P0 0.0234119
CHD9 chromodomain helicase DNA binding protein 9 0.0233199
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0231783
STK38L serine/threonine kinase 38 like 0.0229465
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0229146
FMN1 formin 1 0.0228324
RGS4 regulator of G-protein signaling 4 0.0228085
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0227957
HDX highly divergent homeobox 0.0226013
NPAS2 neuronal PAS domain protein 2 0.0225753
CADM2 cell adhesion molecule 2 0.0225385
PCNX4 pecanex 4 0.0214832
LOC102724023 ES1 protein homolog, mitochondrial 0.0206877
RAP1B RAP1B, member of RAS oncogene family 0.0206334
PDLIM5 PDZ and LIM domain 5 0.0203773
MPG N-methylpurine-DNA glycosylase 0.0199523
MYO1E myosin IE 0.0199318
DUSP10 dual specificity phosphatase 10 0.0196658
MACROD2 MACRO domain containing 2 0.019467
UBAP2 ubiquitin associated protein 2 0.01946
TTC17 tetratricopeptide repeat domain 17 0.0194454
PCDH17 protocadherin 17 0.0194043
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.019212
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0188552
BAZ2B bromodomain adjacent to zinc finger domain, 2B 0.0187376
ATM ATM serine/threonine kinase 0.0186978
MBTD1 mbt domain containing 1 0.0183663
ATP10D ATPase, class V, type 10D 0.0183436
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0183354
RPL31 ribosomal protein L31 0.0180625
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0180398
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 0.0178345
NRIP1 nuclear receptor interacting protein 1 0.0177411
CTNND1 catenin (cadherin-associated protein), delta 1 0.0175925
INTS6 integrator complex subunit 6 0.0175769
ITGA1 integrin, alpha 1 0.0175452
KCNT2 potassium channel, sodium activated subfamily T, member 2 0.0175381
TMEM87A transmembrane protein 87A 0.0174875
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 0.0174291
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 0.0173488
FAM13A family with sequence similarity 13, member A 0.0173026
PALLD palladin, cytoskeletal associated protein 0.0171683
DGKH diacylglycerol kinase, eta 0.0170051
SETBP1 SET binding protein 1 0.0169424
PPP4R3B protein phosphatase 4 regulatory subunit 3B 0.0167765
REST RE1-silencing transcription factor 0.0167475
FER fer (fps/fes related) tyrosine kinase 0.0166199
ZMAT3 zinc finger, matrin-type 3 0.0165978
PCDH7 protocadherin 7 0.0165083
SCFD1 sec1 family domain containing 1 0.0165045
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0164194
PRRC2C proline-rich coiled-coil 2C 0.016401
ATF4 activating transcription factor 4 0.0161491

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.206538
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.100154
PTMA prothymosin, alpha -0.0925319
NRG1 neuregulin 1 -0.0798384
COL3A1 collagen, type III, alpha 1 -0.0777226
COL1A1 collagen, type I, alpha 1 -0.0736266
NALF1 NALCN channel auxiliary factor 1 -0.0660622
LPIN1 lipin 1 -0.0617825
THSD4 thrombospondin, type I, domain containing 4 -0.0558853
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0527719
AHNAK AHNAK nucleoprotein -0.0526621
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0484851
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0447938
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0413825
LRFN5 leucine rich repeat and fibronectin type III domain containing 5 -0.0403103
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0394443
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0383998
TMSB10 thymosin beta 10 -0.0382708
GPC5 glypican 5 -0.0376725
NAMPT nicotinamide phosphoribosyltransferase -0.0375835
HMGB2 high mobility group box 2 -0.0366856
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0359571
RPS24 ribosomal protein S24 -0.0356124
AUTS2 autism susceptibility candidate 2 -0.033692
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0324531
UBC ubiquitin C -0.0323547
LIMCH1 LIM and calponin homology domains 1 -0.0316253
DIAPH2 diaphanous-related formin 2 -0.0312422
RPS27A ribosomal protein S27a -0.0307136
PGK1 phosphoglycerate kinase 1 -0.0306096
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0300303
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0292959
WDR45B WD repeat domain 45B -0.0289053
RPL19 ribosomal protein L19 -0.0288904
CRH corticotropin releasing hormone -0.0287217
CDH13 cadherin 13 -0.0285949
PLAT plasminogen activator, tissue -0.0284704
CANX calnexin -0.0283778
RPL35A ribosomal protein L35a -0.0281318
SSBP2 single-stranded DNA binding protein 2 -0.0279532
COL6A1 collagen, type VI, alpha 1 -0.0277387
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.027637
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0274548
MACF1 microtubule-actin crosslinking factor 1 -0.0273897
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0271627
RAD21 RAD21 homolog (S. pombe) -0.0270773
RHOA ras homolog family member A -0.027076
KDM3A lysine (K)-specific demethylase 3A -0.0270397
SPAG9 sperm associated antigen 9 -0.026871
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0268169
PRKCA protein kinase C, alpha -0.0262767
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0258808
SREBF2 sterol regulatory element binding transcription factor 2 -0.0257126
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0256714
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0253454
NF1 neurofibromin 1 -0.0251261
COL18A1 collagen, type XVIII, alpha 1 -0.0250907
PSD3 pleckstrin and Sec7 domain containing 3 -0.0247969
ZC3H11A zinc finger CCCH-type containing 11A -0.0246102
PTPRG protein tyrosine phosphatase, receptor type, G -0.0245287
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0242866
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0241411
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0240777
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0240139
ATXN10 ataxin 10 -0.0238349
SRPK2 SRSF protein kinase 2 -0.0237792
SRSF1 serine/arginine-rich splicing factor 1 -0.0237753
DTNA dystrobrevin, alpha -0.0236284
MYH9 myosin, heavy chain 9, non-muscle -0.0233359
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha -0.0232177
APP amyloid beta (A4) precursor protein -0.023156
HIP1 huntingtin interacting protein 1 -0.0230762
MED13L mediator complex subunit 13-like -0.023045
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0229928
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0229766
BICD1 bicaudal D homolog 1 (Drosophila) -0.0229125
LCORL ligand dependent nuclear receptor corepressor-like -0.0227579
FN1 fibronectin 1 -0.0226673
SETD5 SET domain containing 5 -0.0223882
RPL7A ribosomal protein L7a -0.0223731
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0222379
SLC39A11 solute carrier family 39, member 11 -0.0217782
AOPEP aminopeptidase O (putative) -0.0216427
ACACA acetyl-CoA carboxylase alpha -0.0214308
WAC WW domain containing adaptor with coiled-coil -0.0212172
CADM1 cell adhesion molecule 1 -0.0212163
RHEB Ras homolog enriched in brain -0.0210094
TFG TRK-fused gene -0.0209468
ACTN4 actinin, alpha 4 -0.0207561
CBFB core-binding factor, beta subunit -0.0207495
MAP4 microtubule-associated protein 4 -0.0207449
RBM39 RNA binding motif protein 39 -0.020635
ZMYM2 zinc finger, MYM-type 2 -0.02054
RPS16 ribosomal protein S16 -0.020473
CEP95 centrosomal protein 95kDa -0.0203815
ZFAND3 zinc finger, AN1-type domain 3 -0.0203037
MSI2 musashi RNA-binding protein 2 -0.0202572
SET SET nuclear proto-oncogene -0.0202548
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0201785
HELZ helicase with zinc finger -0.0201593