Tomivosertib_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tomivosertib perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tomivosertib_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CXCL8 chemokine (C-X-C motif) ligand 8 0.104792
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0787714
CDH13 cadherin 13 0.0699778
VEGFA vascular endothelial growth factor A 0.05386
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0536074
GOLGB1 golgin B1 0.052973
NKAIN3 Na+/K+ transporting ATPase interacting 3 0.0491756
VIM vimentin 0.0478163
RPS6 ribosomal protein S6 0.0460765
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0459127
ENO1 enolase 1, (alpha) 0.0427219
RPS8 ribosomal protein S8 0.0415458
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0413304
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) 0.0409519
ALCAM activated leukocyte cell adhesion molecule 0.0395224
TIMP3 TIMP metallopeptidase inhibitor 3 0.0356736
ZSWIM6 zinc finger, SWIM-type containing 6 0.0354192
INHBA inhibin, beta A 0.0326944
IFI6 interferon, alpha-inducible protein 6 0.0326073
VCAN versican 0.0323328
EGFR epidermal growth factor receptor 0.0316122
IL6 interleukin 6 0.0299177
RPL37A ribosomal protein L37a 0.0295786
HDAC9 histone deacetylase 9 0.0294216
EEF2 eukaryotic translation elongation factor 2 0.029206
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0290013
SQSTM1 sequestosome 1 0.028181
RPS12 ribosomal protein S12 0.0277074
JARID2 jumonji, AT rich interactive domain 2 0.0264517
RACK1 receptor for activated C kinase 1 0.0253363
RBMS3 RNA binding motif, single stranded interacting protein 3 0.0253114
HLA-A major histocompatibility complex, class I, A 0.0252797
EXT1 exostosin glycosyltransferase 1 0.0250874
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0250557
AKAP9 A kinase (PRKA) anchor protein 9 0.0249217
VMP1 vacuole membrane protein 1 0.0246792
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0241645
B2M beta-2-microglobulin 0.0236729
ASPH aspartate beta-hydroxylase 0.0235967
BRD2 bromodomain containing 2 0.0235545
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0234353
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0228789
TTC3 tetratricopeptide repeat domain 3 0.0216407
CD44 CD44 molecule (Indian blood group) 0.0213542
SP100 SP100 nuclear antigen 0.0211313
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0210539
MTDH metadherin 0.0210205
POTEF POTE ankyrin domain family, member F 0.0202649
IGFBP7 insulin-like growth factor binding protein 7 0.0197962
KTN1 kinectin 1 (kinesin receptor) 0.0196058
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0194439
ATXN1 ataxin 1 0.0189656
NALF1 NALCN channel auxiliary factor 1 0.018879
LIMS1 LIM and senescent cell antigen-like domains 1 0.0186354
RPS2 ribosomal protein S2 0.0181436
ZBTB20 zinc finger and BTB domain containing 20 0.0181307
RPS3 ribosomal protein S3 0.0181265
DSTN destrin (actin depolymerizing factor) 0.0180814
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0180804
RND3 Rho family GTPase 3 0.0178763
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0177755
CADM1 cell adhesion molecule 1 0.016554
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0165524
NAV1 neuron navigator 1 0.0164995
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0162039
PRRC2C proline-rich coiled-coil 2C 0.016088
HILPDA hypoxia inducible lipid droplet-associated 0.0160184
PDLIM5 PDZ and LIM domain 5 0.0160142
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0159253
IFI16 interferon, gamma-inducible protein 16 0.0158252
MBNL1 muscleblind-like splicing regulator 1 0.0156414
ATF4 activating transcription factor 4 0.0156307
SAMD9 sterile alpha motif domain containing 9 0.0155963
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0154333
NFE2L1 nuclear factor, erythroid 2-like 1 0.0154235
GPBP1 GC-rich promoter binding protein 1 0.015368
ANXA1 annexin A1 0.0153286
RAB2A RAB2A, member RAS oncogene family 0.0153079
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0152349
APLP2 amyloid beta (A4) precursor-like protein 2 0.0151276
MYO10 myosin X 0.0151254
NLRP1 NLR family, pyrin domain containing 1 0.0151254
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0147477
RPS17 ribosomal protein S17 0.014682
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0144525
STC2 stanniocalcin 2 0.0144237
IGFBP3 insulin-like growth factor binding protein 3 0.0142462
RPL9 ribosomal protein L9 0.0142227
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0141829
SON SON DNA binding protein 0.0140714
ZFP36L1 ZFP36 ring finger protein-like 1 0.0139737
FOXP1 forkhead box P1 0.0139667
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0137808
GARS1 glycyl-tRNA synthetase 1 0.013754
EFNA5 ephrin-A5 0.0137014
CUX1 cut-like homeobox 1 0.0136999
UBXN4 UBX domain protein 4 0.0136798
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0136002
ENO2 enolase 2 (gamma, neuronal) 0.0134427
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0132448

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.33051
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.193733
COL1A1 collagen, type I, alpha 1 -0.130403
COL6A3 collagen, type VI, alpha 3 -0.12994
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0546351
TM4SF1 transmembrane 4 L six family member 1 -0.0522586
LOX lysyl oxidase -0.0507544
ATP13A3 ATPase type 13A3 -0.0456126
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0376874
SPAG9 sperm associated antigen 9 -0.0373515
ICAM1 intercellular adhesion molecule 1 -0.0373169
AHNAK AHNAK nucleoprotein -0.0370467
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0368646
ANXA2 annexin A2 -0.0362314
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0331563
MYH9 myosin, heavy chain 9, non-muscle -0.0310212
WSB1 WD repeat and SOCS box containing 1 -0.0304711
NAMPT nicotinamide phosphoribosyltransferase -0.0299279
POSTN periostin, osteoblast specific factor -0.0299051
MT1X metallothionein 1X -0.0298074
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0296782
PTMA prothymosin, alpha -0.028504
USP3 ubiquitin specific peptidase 3 -0.0282689
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0260642
HMGA2 high mobility group AT-hook 2 -0.0246889
FLNA filamin A, alpha -0.0237419
LOXL2 lysyl oxidase-like 2 -0.0234828
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0234306
RBM39 RNA binding motif protein 39 -0.0233984
KDM3A lysine (K)-specific demethylase 3A -0.023173
SMAD3 SMAD family member 3 -0.0228648
TRIO trio Rho guanine nucleotide exchange factor -0.0227837
ZFAND3 zinc finger, AN1-type domain 3 -0.0226493
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.02171
MARCHF6 membrane associated ring-CH-type finger 6 -0.0216663
TFG TRK-fused gene -0.021289
COL1A2 collagen, type I, alpha 2 -0.0210404
CALR calreticulin -0.0210257
FBN1 fibrillin 1 -0.0209192
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0207911
LOC112694756 uncharaterized LOC112694756 -0.0204861
COL7A1 collagen, type VII, alpha 1 -0.0202998
RAB1A RAB1A, member RAS oncogene family -0.0201446
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0198834
SOD2 superoxide dismutase 2, mitochondrial -0.019619
TMSB10 thymosin beta 10 -0.0194778
ELL2 elongation factor, RNA polymerase II, 2 -0.0194333
PLEC plectin -0.019383
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0193512
RAD21 RAD21 homolog (S. pombe) -0.0193117
ZNF292 zinc finger protein 292 -0.0189713
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0188901
COL6A2 collagen, type VI, alpha 2 -0.0187499
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0184541
COL4A2 collagen, type IV, alpha 2 -0.0182021
TNIP1 TNFAIP3 interacting protein 1 -0.018188
RHEB Ras homolog enriched in brain -0.0181759
APP amyloid beta (A4) precursor protein -0.017911
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0178869
KLF7 Kruppel-like factor 7 (ubiquitous) -0.01786
FSTL1 follistatin-like 1 -0.0175776
RASA2 RAS p21 protein activator 2 -0.0174793
PRRC1 proline-rich coiled-coil 1 -0.0171658
ANTXR2 anthrax toxin receptor 2 -0.0167159
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0164104
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0160647
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0157605
CANX calnexin -0.0154935
HOOK2 hook microtubule-tethering protein 2 -0.0152069
PGK1 phosphoglycerate kinase 1 -0.0151039
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0150628
CAMTA1 calmodulin binding transcription activator 1 -0.0150626
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta -0.0150136
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.014939
COL4A1 collagen, type IV, alpha 1 -0.014924
WDR45B WD repeat domain 45B -0.0149193
NDFIP1 Nedd4 family interacting protein 1 -0.0143102
CALM3 calmodulin 3 (phosphorylase kinase, delta) -0.0140777
AFAP1 actin filament associated protein 1 -0.0139299
NPEPPS aminopeptidase puromycin sensitive -0.0138403
SDC4 syndecan 4 -0.0138315
HMGB2 high mobility group box 2 -0.0138064
OGA O-GlcNAcase -0.0137759
RNF168 ring finger protein 168, E3 ubiquitin protein ligase -0.0136852
ANKRD10 ankyrin repeat domain 10 -0.0136759
ADAM9 ADAM metallopeptidase domain 9 -0.013528
FKBP10 FK506 binding protein 10, 65 kDa -0.0133998
TSC22D2 TSC22 domain family, member 2 -0.013297
PXDN peroxidasin -0.0132647
QKI QKI, KH domain containing, RNA binding -0.0131858
RIPK2 receptor-interacting serine-threonine kinase 2 -0.0131253
COL3A1 collagen, type III, alpha 1 -0.0131132
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0130456
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0129244
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0129117
LMAN1 lectin, mannose-binding, 1 -0.0129077
ARHGAP35 Rho GTPase activating protein 35 -0.0127109
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0124181
GOLT1B golgi transport 1B -0.0123859
NFIX nuclear factor I/X (CCAAT-binding transcription factor) -0.0122836