Tomivosertib_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tomivosertib perturbation in KATO III cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tomivosertib_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.166357
LMO7 LIM domain 7 0.163224
MYOF myoferlin 0.0980501
B2M beta-2-microglobulin 0.095805
MACC1 metastasis associated in colon cancer 1 0.0942991
TMC5 transmembrane channel-like 5 0.0881366
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0860536
LOC102724023 ES1 protein homolog, mitochondrial 0.0807663
IFI6 interferon, alpha-inducible protein 6 0.06999
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.06786
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0676291
EZR ezrin 0.063417
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0630305
DSPP dentin sialophosphoprotein 0.0625298
SEPTIN9 septin 9 0.0588263
TJP1 tight junction protein 1 0.0557384
GDA guanine deaminase 0.054919
POTEF POTE ankyrin domain family, member F 0.054818
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0528641
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.052424
IFI27 interferon, alpha-inducible protein 27 0.0509567
LIMA1 LIM domain and actin binding 1 0.0501472
PLSCR1 phospholipid scramblase 1 0.0493338
RPL23 ribosomal protein L23 0.0476234
MYO1E myosin IE 0.0475485
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0473151
RPS19 ribosomal protein S19 0.0461906
PTPRK protein tyrosine phosphatase, receptor type, K 0.0459962
AREG amphiregulin 0.0458934
SH3RF1 SH3 domain containing ring finger 1 0.0458496
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0455887
RPS6 ribosomal protein S6 0.0448582
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.043706
NCEH1 neutral cholesterol ester hydrolase 1 0.0422987
DSTN destrin (actin depolymerizing factor) 0.0421132
VMP1 vacuole membrane protein 1 0.0418433
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0417773
ASPH aspartate beta-hydroxylase 0.0412986
RPLP1 ribosomal protein, large, P1 0.0403907
KLF6 Kruppel-like factor 6 0.0402501
SP100 SP100 nuclear antigen 0.0401811
SMAD3 SMAD family member 3 0.0396374
ANXA2 annexin A2 0.0390803
MCU mitochondrial calcium uniporter 0.0387273
LIPH lipase, member H 0.0385715
LAMA4 laminin, alpha 4 0.0385593
AKAP13 A kinase (PRKA) anchor protein 13 0.0383975
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0379376
ZSWIM6 zinc finger, SWIM-type containing 6 0.0372625
FTL ferritin, light polypeptide 0.0365356
RPS8 ribosomal protein S8 0.035595
RPS12 ribosomal protein S12 0.0351396
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0342791
CLDN4 claudin 4 0.0339256
RPS2 ribosomal protein S2 0.0329526
SNX9 sorting nexin 9 0.0328904
RAB7A RAB7A, member RAS oncogene family 0.0327926
RBM47 RNA binding motif protein 47 0.0327539
LCN2 lipocalin 2 0.0326367
ZC3H12B zinc finger CCCH-type containing 12B 0.0326089
TXNRD1 thioredoxin reductase 1 0.0322179
MBNL2 muscleblind-like splicing regulator 2 0.0319207
ATP11A ATPase, class VI, type 11A 0.0318407
C6ORF132 chromosome 6 open reading frame 132 0.0310667
ST14 suppression of tumorigenicity 14 (colon carcinoma) 0.0307242
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 0.0303598
PRSS3 protease, serine, 3 0.030043
NDUFA4 NDUFA4, mitochondrial complex associated 0.0293116
EIF1 eukaryotic translation initiation factor 1 0.0288277
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0288179
STK24 serine/threonine kinase 24 0.0286572
CYSTM1 cysteine-rich transmembrane module containing 1 0.0285044
VCL vinculin 0.0284135
SPATS2L spermatogenesis associated, serine-rich 2-like 0.028374
SIK3 SIK family kinase 3 0.0281507
APLP2 amyloid beta (A4) precursor-like protein 2 0.0281486
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0281478
RASEF RAS and EF-hand domain containing 0.0278205
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0277424
GOLGB1 golgin B1 0.0277066
PCSK5 proprotein convertase subtilisin/kexin type 5 0.0276327
SAMD9 sterile alpha motif domain containing 9 0.027454
COBL cordon-bleu WH2 repeat protein 0.0271842
ANXA11 annexin A11 0.0268244
CATSPERB catsper channel auxiliary subunit beta 0.0268107
AKAP9 A kinase (PRKA) anchor protein 9 0.0265466
BPTF bromodomain PHD finger transcription factor 0.0264638
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0264154
BAIAP2L1 BAI1-associated protein 2-like 1 0.0262149
TMEM45B transmembrane protein 45B 0.0253792
PDLIM5 PDZ and LIM domain 5 0.025341
CTNND1 catenin (cadherin-associated protein), delta 1 0.025274
CAPN8 calpain 8 0.0250565
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0249656
UGCG UDP-glucose ceramide glucosyltransferase 0.024462
TIPARP TCDD-inducible poly(ADP-ribose) polymerase 0.0242087
RPS17 ribosomal protein S17 0.0241358
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0240718
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0240609
HLA-A major histocompatibility complex, class I, A 0.024014

decreased expression

Symbol Name Standardized Value
NPSR1 neuropeptide S receptor 1 -0.250141
FGFR2 fibroblast growth factor receptor 2 -0.135901
CEMIP cell migration inducing protein, hyaluronan binding -0.118673
GMDS GDP-mannose 4,6-dehydratase -0.0903372
NDRG1 N-myc downstream regulated 1 -0.0680629
TMEM123 transmembrane protein 123 -0.0639385
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0638916
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0593046
PGK1 phosphoglycerate kinase 1 -0.0590459
FAT1 FAT atypical cadherin 1 -0.0587397
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0547423
WDR45B WD repeat domain 45B -0.0518202
KDM3A lysine (K)-specific demethylase 3A -0.0510222
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0508602
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0496372
AUTS2 autism susceptibility candidate 2 -0.0481535
RAB6A RAB6A, member RAS oncogene family -0.0476518
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0473984
PTMA prothymosin, alpha -0.0458959
TRPS1 trichorhinophalangeal syndrome I -0.0458671
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0457837
IARS1 isoleucyl-tRNA synthetase 1 -0.0443176
ACACA acetyl-CoA carboxylase alpha -0.0438323
EHBP1 EH domain binding protein 1 -0.0427338
RBM39 RNA binding motif protein 39 -0.0418748
VEGFA vascular endothelial growth factor A -0.0406344
ZFAND3 zinc finger, AN1-type domain 3 -0.0402203
MAML2 mastermind-like 2 (Drosophila) -0.040017
FLNB filamin B, beta -0.0392909
CD46 CD46 molecule, complement regulatory protein -0.0381288
TMCC1 transmembrane and coiled-coil domain family 1 -0.0381059
ZMYND8 zinc finger, MYND-type containing 8 -0.0372307
KRT7 keratin 7, type II -0.036539
ITGB4 integrin, beta 4 -0.0360577
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0356081
BIRC6 baculoviral IAP repeat containing 6 -0.035186
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0343629
PTK2 protein tyrosine kinase 2 -0.0339074
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0338935
PPARG peroxisome proliferator-activated receptor gamma -0.0338323
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0337456
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0335573
KRT8 keratin 8, type II -0.0334748
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0333279
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0325913
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0325499
GRB10 growth factor receptor-bound protein 10 -0.0322131
DLG1 discs, large homolog 1 (Drosophila) -0.0321753
ARHGAP6 Rho GTPase activating protein 6 -0.0321619
ATF7IP2 activating transcription factor 7 interacting protein 2 -0.0313807
ANLN anillin, actin binding protein -0.0302311
XYLT1 xylosyltransferase I -0.0298832
PDIA4 protein disulfide isomerase family A, member 4 -0.0297462
FAM13A family with sequence similarity 13, member A -0.0296624
TPD52 tumor protein D52 -0.029457
CCNY cyclin Y -0.0291996
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0291494
KLHL29 kelch-like family member 29 -0.0287076
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0279878
KMT2E lysine (K)-specific methyltransferase 2E -0.0279115
PRKCA protein kinase C, alpha -0.0278976
RNF43 ring finger protein 43 -0.0278248
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0276183
ARHGAP12 Rho GTPase activating protein 12 -0.0273887
CDK6 cyclin-dependent kinase 6 -0.0273853
BACE2 beta-site APP-cleaving enzyme 2 -0.0270435
ZMYM2 zinc finger, MYM-type 2 -0.0270017
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.025963
TFRC transferrin receptor -0.0258618
ANO1 anoctamin 1, calcium activated chloride channel -0.0258067
COG5 component of oligomeric golgi complex 5 -0.0255606
CCND1 cyclin D1 -0.025501
RAB1A RAB1A, member RAS oncogene family -0.0254673
PDIA3 protein disulfide isomerase family A, member 3 -0.0254506
TNIK TRAF2 and NCK interacting kinase -0.0253426
CANX calnexin -0.0252504
EYA2 EYA transcriptional coactivator and phosphatase 2 -0.0249614
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0249205
ESRP1 epithelial splicing regulatory protein 1 -0.0248183
ARHGAP32 Rho GTPase activating protein 32 -0.0247697
SAMD12 sterile alpha motif domain containing 12 -0.0246817
EHF ets homologous factor -0.0245381
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0245177
AXIN2 axin 2 -0.0243923
DDIT4 DNA-damage-inducible transcript 4 -0.024391
NFIA nuclear factor I/A -0.024379
USP34 ubiquitin specific peptidase 34 -0.0243559
NEK6 NIMA-related kinase 6 -0.0242529
XPO1 exportin 1 -0.0239917
TBCD tubulin folding cofactor D -0.0239774
WARS1 tryptophanyl-tRNA synthetase 1 -0.0239652
H1-0 H1.0 linker histone -0.0237611
STAU1 staufen double-stranded RNA binding protein 1 -0.0234151
AHNAK AHNAK nucleoprotein -0.0233833
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0231904
PDIA6 protein disulfide isomerase family A, member 6 -0.0231787
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0226229
ACSS2 acyl-CoA synthetase short-chain family member 2 -0.022514
ZNRF3 zinc and ring finger 3 -0.0224088
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0222806