Tomivosertib_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tomivosertib perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tomivosertib_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RPS12 ribosomal protein S12 0.0705164
TP63 tumor protein p63 0.0629198
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0593529
BIRC3 baculoviral IAP repeat containing 3 0.0528935
RPL37A ribosomal protein L37a 0.0493439
ZDHHC14 zinc finger, DHHC-type containing 14 0.0459691
PSD3 pleckstrin and Sec7 domain containing 3 0.0453733
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0393836
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0382907
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0335739
ZSWIM6 zinc finger, SWIM-type containing 6 0.0329676
CXCL8 chemokine (C-X-C motif) ligand 8 0.0327099
HLA-A major histocompatibility complex, class I, A 0.0319774
SP100 SP100 nuclear antigen 0.0308487
JUN jun proto-oncogene 0.0299114
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0296936
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0292173
VMP1 vacuole membrane protein 1 0.0262884
HLA-B major histocompatibility complex, class I, B 0.0262624
POTEF POTE ankyrin domain family, member F 0.0260924
NPAS2 neuronal PAS domain protein 2 0.0257447
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0255389
CAPRIN2 caprin family member 2 0.0250154
HOMER1 homer scaffolding protein 1 0.024653
TRIM56 tripartite motif containing 56 0.0246502
SDK1 sidekick cell adhesion molecule 1 0.0242772
ENO2 enolase 2 (gamma, neuronal) 0.024028
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0238332
B2M beta-2-microglobulin 0.0233835
RPS6 ribosomal protein S6 0.0223089
RPS3 ribosomal protein S3 0.0222718
RPS2 ribosomal protein S2 0.0220987
RPS8 ribosomal protein S8 0.0220159
RPS17 ribosomal protein S17 0.0219655
RPL31 ribosomal protein L31 0.0218122
PDE10A phosphodiesterase 10A 0.021728
GOLGB1 golgin B1 0.0216278
HDAC9 histone deacetylase 9 0.0210174
WWTR1 WW domain containing transcription regulator 1 0.0207993
DST dystonin 0.0207344
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0202413
RACK1 receptor for activated C kinase 1 0.0202189
MCTP1 multiple C2 domains, transmembrane 1 0.0200588
ANGPTL4 angiopoietin-like 4 0.019961
PCDH1 protocadherin 1 0.0197751
SOX9 SRY (sex determining region Y)-box 9 0.0197423
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 0.0196586
INTS6 integrator complex subunit 6 0.01948
TGM2 transglutaminase 2 0.0190689
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0188416
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0187873
LOC102724023 ES1 protein homolog, mitochondrial 0.0186759
EEF1G eukaryotic translation elongation factor 1 gamma 0.0181871
FTH1 ferritin, heavy polypeptide 1 0.0181826
APLP2 amyloid beta (A4) precursor-like protein 2 0.0179515
CSMD3 CUB and Sushi multiple domains 3 0.0178982
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.017711
EGR1 early growth response 1 0.0176406
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 0.0173744
IFIH1 interferon induced with helicase C domain 1 0.0173514
HILPDA hypoxia inducible lipid droplet-associated 0.0171921
IFI6 interferon, alpha-inducible protein 6 0.0166291
PLSCR1 phospholipid scramblase 1 0.0165781
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0163882
UBC ubiquitin C 0.0163124
RNF213 ring finger protein 213 0.0162728
EHBP1 EH domain binding protein 1 0.0162606
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 0.0158283
EEF2 eukaryotic translation elongation factor 2 0.0157492
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0156301
LYST lysosomal trafficking regulator 0.0156181
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0155725
ARFGEF3 ARFGEF family member 3 0.0155587
PRELID2 PRELI domain containing 2 0.0152513
SQSTM1 sequestosome 1 0.0151716
TIMP2 TIMP metallopeptidase inhibitor 2 0.015021
ZBTB20 zinc finger and BTB domain containing 20 0.0149002
VEGFA vascular endothelial growth factor A 0.0147916
OFD1 oral-facial-digital syndrome 1 0.0146729
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0146192
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0145399
ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 0.0144845
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0144395
WDR27 WD repeat domain 27 0.0141738
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0141375
TNS3 tensin 3 0.0141138
MCL1 myeloid cell leukemia 1 0.0139844
BICD1 bicaudal D homolog 1 (Drosophila) 0.0139278
HLA-E major histocompatibility complex, class I, E 0.0139072
LRRC49 leucine rich repeat containing 49 0.0138894
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0136105
RAD51B RAD51 paralog B 0.013592
OPTN optineurin 0.0135085
ECE1 endothelin converting enzyme 1 0.0133697
ZNF638 zinc finger protein 638 0.0133609
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0133486
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0133341
TTC3 tetratricopeptide repeat domain 3 0.0133146
BRD2 bromodomain containing 2 0.0133129
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.013266

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.322073
PTMA prothymosin, alpha -0.217359
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.210241
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.172075
VIM vimentin -0.140101
TMSB4X thymosin beta 4, X-linked -0.11457
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.111507
TMSB10 thymosin beta 10 -0.0914855
CANX calnexin -0.0894965
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0865099
AHNAK AHNAK nucleoprotein -0.0809866
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0794934
DLG1 discs, large homolog 1 (Drosophila) -0.0749133
RAI1 retinoic acid induced 1 -0.073391
TM4SF1 transmembrane 4 L six family member 1 -0.0686898
PGK1 phosphoglycerate kinase 1 -0.062789
CENPF centromere protein F, 350/400kDa -0.0622108
APP amyloid beta (A4) precursor protein -0.0619844
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0608262
RBM39 RNA binding motif protein 39 -0.058943
SLC38A2 solute carrier family 38, member 2 -0.0586936
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0573238
ACTG1 actin gamma 1 -0.0566682
TPT1 tumor protein, translationally-controlled 1 -0.0552568
KDM3A lysine (K)-specific demethylase 3A -0.0551621
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0532491
ZNF217 zinc finger protein 217 -0.0513659
WSB1 WD repeat and SOCS box containing 1 -0.0512937
ADGRG6 adhesion G protein-coupled receptor G6 -0.0508908
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0493622
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0482367
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0458121
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0456657
TMEM123 transmembrane protein 123 -0.0453114
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0445556
SPAG9 sperm associated antigen 9 -0.0433045
NAMPT nicotinamide phosphoribosyltransferase -0.0418627
OGA O-GlcNAcase -0.0413871
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0413344
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.041065
TRA2A transformer 2 alpha homolog (Drosophila) -0.0408485
WDR45B WD repeat domain 45B -0.0408395
ZNF292 zinc finger protein 292 -0.0407893
TRIP12 thyroid hormone receptor interactor 12 -0.0400071
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0399093
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0394032
MARCHF6 membrane associated ring-CH-type finger 6 -0.0391655
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) -0.0383792
ANLN anillin, actin binding protein -0.038343
RTN4 reticulon 4 -0.0382817
GARS1 glycyl-tRNA synthetase 1 -0.0382158
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0381144
RPL35A ribosomal protein L35a -0.0377851
SRPK2 SRSF protein kinase 2 -0.037145
PUM2 pumilio RNA-binding family member 2 -0.0368158
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0368005
XPO1 exportin 1 -0.0359091
AFF4 AF4/FMR2 family, member 4 -0.0359026
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta -0.0356742
CALR calreticulin -0.0355805
CSDE1 cold shock domain containing E1, RNA-binding -0.0348509
MATR3 matrin 3 -0.0348175
YBX1 Y box binding protein 1 -0.0348113
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0347197
VDAC1 voltage-dependent anion channel 1 -0.0345915
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0345057
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.0341772
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0335738
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0330276
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0328157
ANXA2 annexin A2 -0.0325475
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0318121
YBX3 Y box binding protein 3 -0.0316941
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0312002
FUS FUS RNA binding protein -0.0311189
TOP1 topoisomerase (DNA) I -0.0308804
SRGN serglycin -0.0308477
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0305867
KPNB1 karyopherin (importin) beta 1 -0.0305733
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0305295
MT1X metallothionein 1X -0.0302311
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0302179
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0301132
ZMYM2 zinc finger, MYM-type 2 -0.0299443
RPS24 ribosomal protein S24 -0.0297704
S100A10 S100 calcium binding protein A10 -0.0295121
EIF1 eukaryotic translation initiation factor 1 -0.0294349
MTF2 metal response element binding transcription factor 2 -0.0293453
OLA1 Obg-like ATPase 1 -0.0293366
NCOR1 nuclear receptor corepressor 1 -0.0293287
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0293203
RLF rearranged L-myc fusion -0.0292606
PDIA3 protein disulfide isomerase family A, member 3 -0.029152
HMGB2 high mobility group box 2 -0.0291254
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon -0.0290127
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0289727
STRN3 striatin, calmodulin binding protein 3 -0.0289333
STAG2 stromal antigen 2 -0.0289148
TNPO1 transportin 1 -0.0289117
FXR1 fragile X mental retardation, autosomal homolog 1 -0.0285292