Tomivosertib_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tomivosertib perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tomivosertib_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0876568
RPS6 ribosomal protein S6 0.0634
RPS12 ribosomal protein S12 0.0452236
RPS8 ribosomal protein S8 0.0408885
RPL37A ribosomal protein L37a 0.0391699
VIM vimentin 0.0388609
PDLIM5 PDZ and LIM domain 5 0.0365473
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0323715
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.0319221
RPL31 ribosomal protein L31 0.0275974
RPS17 ribosomal protein S17 0.0262456
SH3KBP1 SH3-domain kinase binding protein 1 0.026243
RGS2 regulator of G-protein signaling 2 0.0250699
RPS3 ribosomal protein S3 0.0242819
LSAMP limbic system-associated membrane protein 0.0238299
RACK1 receptor for activated C kinase 1 0.023801
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0225264
SQSTM1 sequestosome 1 0.0222074
RPL9 ribosomal protein L9 0.0220964
PDE4D phosphodiesterase 4D, cAMP-specific 0.0216583
RPL26 ribosomal protein L26 0.0215573
RAD51B RAD51 paralog B 0.0208685
RPS2 ribosomal protein S2 0.0204205
DST dystonin 0.0203167
MAP7 microtubule-associated protein 7 0.0194355
PRKN parkin RBR E3 ubiquitin protein ligase 0.0193684
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0189906
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0178559
SMOC1 SPARC related modular calcium binding 1 0.0177179
RPS27 ribosomal protein S27 0.0171249
CDH13 cadherin 13 0.0170758
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0169528
BZW1 basic leucine zipper and W2 domains 1 0.016654
EEF2 eukaryotic translation elongation factor 2 0.0162836
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0159755
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0158671
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0158275
POTEF POTE ankyrin domain family, member F 0.0157903
P3H2 prolyl 3-hydroxylase 2 0.01541
EXT1 exostosin glycosyltransferase 1 0.0144168
AKAP12 A kinase (PRKA) anchor protein 12 0.0141577
ZSWIM6 zinc finger, SWIM-type containing 6 0.0138623
NRXN3 neurexin 3 0.0135049
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0133595
SVIL supervillin 0.0133547
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0126374
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0126166
RPL37 ribosomal protein L37 0.0123164
INTS6 integrator complex subunit 6 0.0122878
SMAD2 SMAD family member 2 0.0122561
HLA-A major histocompatibility complex, class I, A 0.0119938
SOX9 SRY (sex determining region Y)-box 9 0.0119685
PRELID2 PRELI domain containing 2 0.0119593
LOC102724023 ES1 protein homolog, mitochondrial 0.0115312
ENO1 enolase 1, (alpha) 0.0114467
WWOX WW domain containing oxidoreductase 0.0113392
RPL12 ribosomal protein L12 0.0113282
GPHN gephyrin 0.0111929
XYLT1 xylosyltransferase I 0.0110842
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0110613
RPL27 ribosomal protein L27 0.0107355
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 0.010446
MT2A metallothionein 2A 0.0102982
GOLGB1 golgin B1 0.0102548
RPS19 ribosomal protein S19 0.0102402
AKAP13 A kinase (PRKA) anchor protein 13 0.0100888
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0100545
RAB3B RAB3B, member RAS oncogene family 0.00984429
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.00979413
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.00974484
FBXL7 F-box and leucine-rich repeat protein 7 0.00933205
CREB3L2 cAMP responsive element binding protein 3-like 2 0.00931067
RPS13 ribosomal protein S13 0.00927448
TENM2 teneurin transmembrane protein 2 0.00922134
GPBP1 GC-rich promoter binding protein 1 0.00910237
SOX4 SRY (sex determining region Y)-box 4 0.00905814
ZFP36 ZFP36 ring finger protein 0.00905302
FAM107B family with sequence similarity 107, member B 0.00903157
NFE2L1 nuclear factor, erythroid 2-like 1 0.00901722
PKM pyruvate kinase, muscle 0.00894802
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.00891547
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) 0.00889871
ENO2 enolase 2 (gamma, neuronal) 0.00869685
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae) 0.00859031
SRRM2 serine/arginine repetitive matrix 2 0.00855305
RPS14 ribosomal protein S14 0.00853674
EEF1G eukaryotic translation elongation factor 1 gamma 0.00848424
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.00847528
APLP2 amyloid beta (A4) precursor-like protein 2 0.00821229
SYNE2 spectrin repeat containing, nuclear envelope 2 0.00816311
RPS23 ribosomal protein S23 0.00802241
TTC28 tetratricopeptide repeat domain 28 0.00794504
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.00787491
RPLP0 ribosomal protein, large, P0 0.00784519
ITPK1 inositol-tetrakisphosphate 1-kinase 0.0077661
DSTN destrin (actin depolymerizing factor) 0.00772443
EPC2 enhancer of polycomb homolog 2 (Drosophila) 0.00771903
LINGO2 leucine rich repeat and Ig domain containing 2 0.00770036
SET SET nuclear proto-oncogene 0.00766342
PMEPA1 prostate transmembrane protein, androgen induced 1 0.00763123

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.144715
NAMPT nicotinamide phosphoribosyltransferase -0.118562
FN1 fibronectin 1 -0.112581
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0987017
EFNA5 ephrin-A5 -0.0770305
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0750969
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0733654
ELL2 elongation factor, RNA polymerase II, 2 -0.0560663
TM4SF1 transmembrane 4 L six family member 1 -0.0551093
TFPI2 tissue factor pathway inhibitor 2 -0.0528573
ASPH aspartate beta-hydroxylase -0.0513851
GDA guanine deaminase -0.0491135
TRIO trio Rho guanine nucleotide exchange factor -0.0467375
TMSB10 thymosin beta 10 -0.0429735
SPAG9 sperm associated antigen 9 -0.0419653
RBM39 RNA binding motif protein 39 -0.037197
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0357585
IGFBP3 insulin-like growth factor binding protein 3 -0.0349894
LIMCH1 LIM and calponin homology domains 1 -0.034262
RTN4 reticulon 4 -0.0334244
PGK1 phosphoglycerate kinase 1 -0.0331713
OGA O-GlcNAcase -0.0328021
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.032551
TXNRD1 thioredoxin reductase 1 -0.032443
CANX calnexin -0.0322186
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0315104
NEK7 NIMA-related kinase 7 -0.0304785
PTMA prothymosin, alpha -0.0304765
EPB41L3 erythrocyte membrane protein band 4.1-like 3 -0.0302702
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0297486
NPAS2 neuronal PAS domain protein 2 -0.0294819
FNDC3B fibronectin type III domain containing 3B -0.0275355
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0266874
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 -0.0263652
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0261229
TGFBI transforming growth factor, beta-induced, 68kDa -0.025374
AGFG1 ArfGAP with FG repeats 1 -0.025074
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0247573
KDM3A lysine (K)-specific demethylase 3A -0.0242082
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0238072
SOD2 superoxide dismutase 2, mitochondrial -0.0228381
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0228004
WDR45B WD repeat domain 45B -0.0226275
NRCAM neuronal cell adhesion molecule -0.022512
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0222732
SMYD3 SET and MYND domain containing 3 -0.0217791
PDE10A phosphodiesterase 10A -0.021446
TRA2A transformer 2 alpha homolog (Drosophila) -0.0213302
USP3 ubiquitin specific peptidase 3 -0.0212526
LAMA1 laminin, alpha 1 -0.0210279
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0209751
PCBP3 poly(rC) binding protein 3 -0.0207813
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0207581
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0204404
BRWD3 bromodomain and WD repeat domain containing 3 -0.0203026
GNAS GNAS complex locus -0.0200032
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0193015
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0191972
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0191723
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0191461
GRAMD1B GRAM domain containing 1B -0.0188965
MCL1 myeloid cell leukemia 1 -0.0188907
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0188012
BIRC6 baculoviral IAP repeat containing 6 -0.018534
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0184931
MARCHF6 membrane associated ring-CH-type finger 6 -0.0184929
NCOA7 nuclear receptor coactivator 7 -0.0184245
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0182969
IGF1R insulin-like growth factor 1 receptor -0.018172
PUM2 pumilio RNA-binding family member 2 -0.0181068
SRPK2 SRSF protein kinase 2 -0.0180787
S100A6 S100 calcium binding protein A6 -0.0174908
KMT2C lysine (K)-specific methyltransferase 2C -0.0173423
PYGL phosphorylase, glycogen, liver -0.0173263
GOLGA4 golgin A4 -0.0172819
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked -0.017166
NUP58 nucleoporin 58 -0.0170817
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0169842
RAB1A RAB1A, member RAS oncogene family -0.0168903
NDRG1 N-myc downstream regulated 1 -0.0164924
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0164472
PDIA4 protein disulfide isomerase family A, member 4 -0.016429
HELZ helicase with zinc finger -0.0163421
LMAN1 lectin, mannose-binding, 1 -0.0163037
APP amyloid beta (A4) precursor protein -0.0162673
ZNF207 zinc finger protein 207 -0.0161334
MATR3 matrin 3 -0.0160495
OSMR oncostatin M receptor -0.0159864
BMERB1 bMERB domain containing 1 -0.015891
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa -0.0157513
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0156392
ARID4B AT rich interactive domain 4B (RBP1-like) -0.015583
CALR calreticulin -0.0155462
RAI1 retinoic acid induced 1 -0.0155451
FLNB filamin B, beta -0.0155159
TMX4 thioredoxin-related transmembrane protein 4 -0.0154932
ATP13A3 ATPase type 13A3 -0.0154515
MYOF myoferlin -0.0153165
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0153088
PHF20 PHD finger protein 20 -0.0152833