Tomivosertib_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tomivosertib perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tomivosertib_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HDAC9 histone deacetylase 9 0.0252562
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0215773
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0178554
DDIT4 DNA-damage-inducible transcript 4 0.0172309
ANKRD33B ankyrin repeat domain 33B 0.0163702
ZEB2 zinc finger E-box binding homeobox 2 0.0160379
PGAP1 post-GPI attachment to proteins 1 0.0155053
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0154362
COL5A2 collagen, type V, alpha 2 0.0128789
FOXP2 forkhead box P2 0.0128549
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0127696
GPHN gephyrin 0.0125282
RPS2 ribosomal protein S2 0.0122859
CDC73 cell division cycle 73 0.0121585
BZW1 basic leucine zipper and W2 domains 1 0.0120874
USP53 ubiquitin specific peptidase 53 0.0118041
KMT2C lysine (K)-specific methyltransferase 2C 0.0114366
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 0.0113994
LRP12 low density lipoprotein receptor-related protein 12 0.0113988
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0108703
JUN jun proto-oncogene 0.0105743
MBOAT2 membrane bound O-acyltransferase domain containing 2 0.0105666
BHLHE40 basic helix-loop-helix family, member e40 0.0104992
TCEA1 transcription elongation factor A (SII), 1 0.0102081
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0101279
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0101134
DSCAM Down syndrome cell adhesion molecule 0.0100276
NALF1 NALCN channel auxiliary factor 1 0.00996237
INTS6 integrator complex subunit 6 0.00989552
NOTCH2 notch 2 0.00982774
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.00978097
NCKAP1 NCK-associated protein 1 0.00973514
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.00965879
DENND4C DENN/MADD domain containing 4C 0.00965628
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.00942185
BRD2 bromodomain containing 2 0.00940664
PCDH18 protocadherin 18 0.00939478
ZNF146 zinc finger protein 146 0.00929904
SCAF11 SR-related CTD-associated factor 11 0.00928115
SEC31A SEC31 homolog A (S. cerevisiae) 0.00922281
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.00922218
ZFP36 ZFP36 ring finger protein 0.00917003
ASPH aspartate beta-hydroxylase 0.00912885
HBP1 HMG-box transcription factor 1 0.00909599
SYDE2 synapse defective 1, Rho GTPase, homolog 2 (C. elegans) 0.00908966
IWS1 IWS1 homolog (S. cerevisiae) 0.00899562
RB1 retinoblastoma 1 0.00872815
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0086851
FNDC3A fibronectin type III domain containing 3A 0.00856446
SUCO SUN domain containing ossification factor 0.00854937
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.00853486
ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 0.00853013
TTC28 tetratricopeptide repeat domain 28 0.00844979
IFRD1 interferon-related developmental regulator 1 0.00831505
NKTR natural killer cell triggering receptor 0.00826253
GOLGB1 golgin B1 0.00822124
KMT2E lysine (K)-specific methyltransferase 2E 0.00820849
BBX bobby sox homolog (Drosophila) 0.00818464
RIGI RNA sensor RIG-I 0.00810416
CGAS cyclic GMP-AMP synthase 0.00804176
PDLIM5 PDZ and LIM domain 5 0.00801711
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.00794827
ANKIB1 ankyrin repeat and IBR domain containing 1 0.00790626
FMNL2 formin-like 2 0.00788716
PCCA propionyl CoA carboxylase, alpha polypeptide 0.00787586
PM20D1 peptidase M20 domain containing 1 0.00785725
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.00781307
SNAPC1 small nuclear RNA activating complex, polypeptide 1, 43kDa 0.00779718
FBXL2 F-box and leucine-rich repeat protein 2 0.00778822
ANO6 anoctamin 6 0.00778087
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.00774007
TMEM131 transmembrane protein 131 0.0077069
DNAJC10 DnaJ (Hsp40) homolog, subfamily C, member 10 0.00769654
RCOR3 REST corepressor 3 0.00761561
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.00761109
UBN2 ubinuclein 2 0.00758283
BIRC3 baculoviral IAP repeat containing 3 0.0075645
RCOR1 REST corepressor 1 0.00752609
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.00750731
CCNYL1 cyclin Y-like 1 0.00739623
KPNA1 karyopherin alpha 1 (importin alpha 5) 0.00739552
OGA O-GlcNAcase 0.00739448
LMO7 LIM domain 7 0.00739009
RAD21 RAD21 homolog (S. pombe) 0.00734987
SMAD4 SMAD family member 4 0.00732845
ZSWIM6 zinc finger, SWIM-type containing 6 0.00730316
HSPA4L heat shock 70kDa protein 4-like 0.00728086
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.00719528
USP9X ubiquitin specific peptidase 9, X-linked 0.00718825
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.00717732
AGTPBP1 ATP/GTP binding protein 1 0.00710322
RSRC2 arginine/serine-rich coiled-coil 2 0.00707063
SECISBP2L SECIS binding protein 2-like 0.00700783
ERBIN erbb2 interacting protein 0.0069752
SUZ12 SUZ12 polycomb repressive complex 2 subunit 0.00696847
EIF3E eukaryotic translation initiation factor 3, subunit E 0.00693157
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.00692177
GLS2 glutaminase 2 (liver, mitochondrial) 0.00691637
EFNA5 ephrin-A5 0.00687207
ARHGAP5 Rho GTPase activating protein 5 0.00686231

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.132979
TMSB10 thymosin beta 10 -0.1057
PTMA prothymosin, alpha -0.0685591
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0527141
RPS16 ribosomal protein S16 -0.051068
COL11A1 collagen, type XI, alpha 1 -0.0475604
CADM2 cell adhesion molecule 2 -0.0469169
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.043435
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0429685
RPLP1 ribosomal protein, large, P1 -0.0389813
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0365463
PFN1 profilin 1 -0.0364621
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0346176
CENPF centromere protein F, 350/400kDa -0.0336007
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0324011
RPL35A ribosomal protein L35a -0.032272
HMGB1 high mobility group box 1 -0.0316475
ACTG1 actin gamma 1 -0.0314319
GPC3 glypican 3 -0.0304845
ZFAND3 zinc finger, AN1-type domain 3 -0.0296747
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0293186
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0284971
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0281544
RPL11 ribosomal protein L11 -0.0280017
TMSB4X thymosin beta 4, X-linked -0.0257837
CNRIP1 cannabinoid receptor interacting protein 1 -0.0257707
RPL23 ribosomal protein L23 -0.0256518
MDK midkine (neurite growth-promoting factor 2) -0.0253422
RPS19 ribosomal protein S19 -0.0250242
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0248424
RAI1 retinoic acid induced 1 -0.024228
TPT1 tumor protein, translationally-controlled 1 -0.0239435
RPL5 ribosomal protein L5 -0.0238028
MYL12B myosin, light chain 12B, regulatory -0.0235231
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0230839
ITGAV integrin, alpha V -0.0228563
H3-3B H3.3 histone B -0.0226888
CALR calreticulin -0.0225967
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0220998
RPS21 ribosomal protein S21 -0.0219877
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.0218269
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 -0.0215298
RPS6 ribosomal protein S6 -0.0214458
WSB1 WD repeat and SOCS box containing 1 -0.0212761
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.021261
KPNB1 karyopherin (importin) beta 1 -0.0212105
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.021183
PARD3B par-3 family cell polarity regulator beta -0.0209965
RPS8 ribosomal protein S8 -0.0209084
RPL32 ribosomal protein L32 -0.0208718
THBS1 thrombospondin 1 -0.020611
RTN4 reticulon 4 -0.0199781
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0199477
S100A9 S100 calcium binding protein A9 -0.0198475
RPLP2 ribosomal protein, large, P2 -0.0196631
YBX1 Y box binding protein 1 -0.0195571
TENM3 teneurin transmembrane protein 3 -0.0191346
RPL19 ribosomal protein L19 -0.0189399
COL1A2 collagen, type I, alpha 2 -0.0188018
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0185051
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0180376
DEK DEK proto-oncogene -0.0177742
S100A10 S100 calcium binding protein A10 -0.0177257
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0176478
RPL36A ribosomal protein L36a -0.0176459
PRRC2C proline-rich coiled-coil 2C -0.0172706
GNAS GNAS complex locus -0.0172138
MAP4 microtubule-associated protein 4 -0.0171131
RPL12 ribosomal protein L12 -0.016918
RPL34 ribosomal protein L34 -0.0168364
FBL fibrillarin -0.016714
ATP5F1B ATP synthase F1 subunit beta -0.0164321
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0163127
ACTN4 actinin, alpha 4 -0.0160766
HSPB1 heat shock 27kDa protein 1 -0.0157139
PHIP pleckstrin homology domain interacting protein -0.0153992
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0152975
NRG1 neuregulin 1 -0.0152775
CALM3 calmodulin 3 (phosphorylase kinase, delta) -0.0152677
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0152315
IGF1R insulin-like growth factor 1 receptor -0.0151279
ADGRV1 adhesion G protein-coupled receptor V1 -0.0151165
MKI67 marker of proliferation Ki-67 -0.0150023
HMGB2 high mobility group box 2 -0.0149719
AHNAK AHNAK nucleoprotein -0.0149642
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0146694
RPL8 ribosomal protein L8 -0.0145989
SERF2 small EDRK-rich factor 2 -0.0145114
PCBP2 poly(rC) binding protein 2 -0.0143507
SLIT2 slit homolog 2 (Drosophila) -0.0142609
RPL21 ribosomal protein L21 -0.0142019
ARHGAP15 Rho GTPase activating protein 15 -0.014168
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0138379
RPL36 ribosomal protein L36 -0.0136604
EMP1 epithelial membrane protein 1 -0.0136422
PLPP1 phospholipid phosphatase 1 -0.0135517
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0135404
EIF3K eukaryotic translation initiation factor 3, subunit K -0.0134797
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.013344
COTL1 coactosin-like F-actin binding protein 1 -0.0133091