Tomivosertib_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tomivosertib perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tomivosertib_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0609253
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0476398
PDE4B phosphodiesterase 4B, cAMP-specific 0.0451022
RPS6 ribosomal protein S6 0.0445111
RPS8 ribosomal protein S8 0.0416048
MKI67 marker of proliferation Ki-67 0.0388017
POTEF POTE ankyrin domain family, member F 0.0363765
CENPF centromere protein F, 350/400kDa 0.0358369
LOC102724023 ES1 protein homolog, mitochondrial 0.0347109
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0335524
SMC4 structural maintenance of chromosomes 4 0.0299658
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0279306
BMP10 bone morphogenetic protein 10 0.0266418
DIAPH3 diaphanous-related formin 3 0.0248136
RFC3 replication factor C (activator 1) 3, 38kDa 0.0245289
HSPB1 heat shock 27kDa protein 1 0.0237736
GLI3 GLI family zinc finger 3 0.02226
RPS2 ribosomal protein S2 0.0217726
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0211684
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0205403
FER1L6 fer-1-like family member 6 0.0203321
RACK1 receptor for activated C kinase 1 0.019612
APLP2 amyloid beta (A4) precursor-like protein 2 0.0195644
HDAC9 histone deacetylase 9 0.019115
PDE4D phosphodiesterase 4D, cAMP-specific 0.018291
TSC22D1 TSC22 domain family, member 1 0.0182784
MACROD2 MACRO domain containing 2 0.0171375
RRM2 ribonucleotide reductase M2 0.0170376
CENPE centromere protein E, 312kDa 0.0169558
SOX9 SRY (sex determining region Y)-box 9 0.0167949
MYO5C myosin VC 0.0167881
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0166304
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 0.0160285
RPS12 ribosomal protein S12 0.015753
RPL31 ribosomal protein L31 0.0156386
FOXP1 forkhead box P1 0.0155089
NAV2 neuron navigator 2 0.0151854
TUBA1B tubulin, alpha 1b 0.0148127
LDHB lactate dehydrogenase B 0.0147599
TUBB4B tubulin, beta 4B class IVb 0.0141553
TPI1 triosephosphate isomerase 1 0.0139115
RPS17 ribosomal protein S17 0.0137684
ITGA10 integrin, alpha 10 0.0136446
AEBP2 AE binding protein 2 0.0136139
TPX2 TPX2, microtubule-associated 0.0132785
KIF5C kinesin family member 5C 0.0131555
INTS6 integrator complex subunit 6 0.0130261
PDE7B phosphodiesterase 7B 0.0129753
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0129466
HJURP Holliday junction recognition protein 0.0127011
PCNX4 pecanex 4 0.0126415
ARHGAP25 Rho GTPase activating protein 25 0.0125691
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0125474
ALDH1A2 aldehyde dehydrogenase 1 family, member A2 0.0125407
SEPTIN9 septin 9 0.0125403
IFI16 interferon, gamma-inducible protein 16 0.0121554
CRPPA CDP-L-ribitol pyrophosphorylase A 0.0120655
NCAPG2 non-SMC condensin II complex, subunit G2 0.0117695
MLIP muscular LMNA-interacting protein 0.0117174
DUSP6 dual specificity phosphatase 6 0.0116949
STMN1 stathmin 1 0.0113076
CUX1 cut-like homeobox 1 0.0112606
BPTF bromodomain PHD finger transcription factor 0.011145
BRD2 bromodomain containing 2 0.0111366
ASTN2 astrotactin 2 0.0109576
ATAD2 ATPase family, AAA domain containing 2 0.0109442
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.0108165
ZSWIM6 zinc finger, SWIM-type containing 6 0.0108114
KNL1 kinetochore scaffold 1 0.0106729
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0106374
CENPP centromere protein P 0.0106159
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.0105044
SPRY1 sprouty homolog 1, antagonist of FGF signaling (Drosophila) 0.0104921
MYADM myeloid-associated differentiation marker 0.0104231
RPS27 ribosomal protein S27 0.0103743
PPDPF pancreatic progenitor cell differentiation and proliferation factor 0.0102858
GTSE1 G-2 and S-phase expressed 1 0.0102751
CKAP2 cytoskeleton associated protein 2 0.0102261
CEP112 centrosomal protein 112kDa 0.0102083
RPL37A ribosomal protein L37a 0.0101194
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0101044
ID3 inhibitor of DNA binding 3, dominant negative helix-loop-helix protein 0.00999748
IGF2 insulin-like growth factor 2 0.00995947
SPATS2L spermatogenesis associated, serine-rich 2-like 0.00991114
NUSAP1 nucleolar and spindle associated protein 1 0.009909
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.00980723
EBNA1BP2 EBNA1 binding protein 2 0.00977771
PRH1 proline-rich protein HaeIII subfamily 1 0.00969351
FOXM1 forkhead box M1 0.00952281
EPC2 enhancer of polycomb homolog 2 (Drosophila) 0.00951274
SMC1A structural maintenance of chromosomes 1A 0.00938208
CREB5 cAMP responsive element binding protein 5 0.00930502
NCAPG non-SMC condensin I complex, subunit G 0.00924846
DNAJC8 DnaJ (Hsp40) homolog, subfamily C, member 8 0.00921044
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.00916703
DCAF7 DDB1 and CUL4 associated factor 7 0.00916651
CEP128 centrosomal protein 128kDa 0.00913423
RABGAP1L RAB GTPase activating protein 1-like 0.00913345
HDGF hepatoma-derived growth factor 0.00909798
DHRSX dehydrogenase/reductase (SDR family) X-linked 0.00904089

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.148861
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.108678
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.100119
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0838921
FLNB filamin B, beta -0.081246
AHNAK AHNAK nucleoprotein -0.0806743
RBM39 RNA binding motif protein 39 -0.074137
GOLGA4 golgin A4 -0.0696741
TMSB4X thymosin beta 4, X-linked -0.0693131
ADAM10 ADAM metallopeptidase domain 10 -0.0680017
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0656969
RTN4 reticulon 4 -0.0654707
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0649694
TXNRD1 thioredoxin reductase 1 -0.06238
KDM3A lysine (K)-specific demethylase 3A -0.0504257
ZNF292 zinc finger protein 292 -0.0494892
ZFAND3 zinc finger, AN1-type domain 3 -0.0477476
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0463588
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0461124
S100A6 S100 calcium binding protein A6 -0.045785
ANK2 ankyrin 2, neuronal -0.0456431
GARS1 glycyl-tRNA synthetase 1 -0.0444755
PGK1 phosphoglycerate kinase 1 -0.0441272
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0435195
LOC112694756 uncharaterized LOC112694756 -0.0426661
NBAS neuroblastoma amplified sequence -0.0423211
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0419931
NAMPT nicotinamide phosphoribosyltransferase -0.0414839
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.041389
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0413653
ACTG1 actin gamma 1 -0.0396921
ENOX1 ecto-NOX disulfide-thiol exchanger 1 -0.0394042
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0391138
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0389963
PNISR PNN-interacting serine/arginine-rich protein -0.0388658
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0372487
COG5 component of oligomeric golgi complex 5 -0.0370061
NFIA nuclear factor I/A -0.0370061
HDLBP high density lipoprotein binding protein -0.0364815
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.036221
CAMTA1 calmodulin binding transcription activator 1 -0.0358403
PYGB phosphorylase, glycogen; brain -0.0354718
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0352763
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.035218
NF1 neurofibromin 1 -0.0346572
LDHA lactate dehydrogenase A -0.0335567
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0334273
WSB1 WD repeat and SOCS box containing 1 -0.0333531
BRWD1 bromodomain and WD repeat domain containing 1 -0.0315344
QKI QKI, KH domain containing, RNA binding -0.0315004
SMYD3 SET and MYND domain containing 3 -0.0312369
EXT1 exostosin glycosyltransferase 1 -0.0310829
SREBF2 sterol regulatory element binding transcription factor 2 -0.0309371
NCOR1 nuclear receptor corepressor 1 -0.0308124
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0307432
DSCAM Down syndrome cell adhesion molecule -0.0305866
ZBTB20 zinc finger and BTB domain containing 20 -0.0305616
EML4 echinoderm microtubule associated protein like 4 -0.0304618
TMEM41B transmembrane protein 41B -0.0302751
SSBP2 single-stranded DNA binding protein 2 -0.0298814
USP3 ubiquitin specific peptidase 3 -0.0298629
ZMYM2 zinc finger, MYM-type 2 -0.0297901
DLG1 discs, large homolog 1 (Drosophila) -0.0297099
PUM2 pumilio RNA-binding family member 2 -0.0289866
MATR3 matrin 3 -0.0289269
FBXO11 F-box protein 11 -0.0286948
MSI2 musashi RNA-binding protein 2 -0.0286431
MON2 MON2 homolog (S. cerevisiae) -0.0285204
IARS1 isoleucyl-tRNA synthetase 1 -0.0283525
BIRC6 baculoviral IAP repeat containing 6 -0.0280682
PTBP2 polypyrimidine tract binding protein 2 -0.027794
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae) -0.027599
RHBDD1 rhomboid domain containing 1 -0.0275548
NUP58 nucleoporin 58 -0.027277
TPT1 tumor protein, translationally-controlled 1 -0.0270794
ADAM9 ADAM metallopeptidase domain 9 -0.0269685
YEATS2 YEATS domain containing 2 -0.0267431
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0267079
SBF2 SET binding factor 2 -0.0264406
GLI2 GLI family zinc finger 2 -0.0259511
FNDC3B fibronectin type III domain containing 3B -0.0259129
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0256307
CDC73 cell division cycle 73 -0.0250378
EVI5 ecotropic viral integration site 5 -0.0250376
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0249088
LPP LIM domain containing preferred translocation partner in lipoma -0.0246478
TTC3 tetratricopeptide repeat domain 3 -0.0246477
ZEB1 zinc finger E-box binding homeobox 1 -0.024596
GSK3B glycogen synthase kinase 3 beta -0.0245708
TMEM65 transmembrane protein 65 -0.0245013
MAP4 microtubule-associated protein 4 -0.0243231
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.0242789
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0242658
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0242533
PICALM phosphatidylinositol binding clathrin assembly protein -0.024241
NBEA neurobeachin -0.0239621
TFG TRK-fused gene -0.0238767
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 -0.0236927
SLC38A2 solute carrier family 38, member 2 -0.0234875
RNF145 ring finger protein 145 -0.0233483