Tomivosertib_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tomivosertib perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tomivosertib_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CXCL8 chemokine (C-X-C motif) ligand 8 0.095113
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0906685
NRG1 neuregulin 1 0.0714403
ZSWIM6 zinc finger, SWIM-type containing 6 0.0632378
LOC102724023 ES1 protein homolog, mitochondrial 0.0460326
STC2 stanniocalcin 2 0.0436366
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.041206
RACK1 receptor for activated C kinase 1 0.0408638
ZFP36L1 ZFP36 ring finger protein-like 1 0.0385937
AKAP12 A kinase (PRKA) anchor protein 12 0.0369525
FTL ferritin, light polypeptide 0.0361573
INTS6 integrator complex subunit 6 0.0358277
PLIN2 perilipin 2 0.0351516
IFI6 interferon, alpha-inducible protein 6 0.0350402
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0348537
IFI27 interferon, alpha-inducible protein 27 0.0336395
LIMCH1 LIM and calponin homology domains 1 0.0333633
SQSTM1 sequestosome 1 0.0325816
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 0.0307364
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0292073
RASAL2 RAS protein activator like 2 0.02914
VIM vimentin 0.0287945
DSTN destrin (actin depolymerizing factor) 0.0265758
RPL37A ribosomal protein L37a 0.026488
RPS8 ribosomal protein S8 0.0260137
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0255712
MRPS6 mitochondrial ribosomal protein S6 0.0251724
PALLD palladin, cytoskeletal associated protein 0.0251706
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0242052
TMSB10 thymosin beta 10 0.0237612
DUSP6 dual specificity phosphatase 6 0.0235567
BZW1 basic leucine zipper and W2 domains 1 0.0233191
SLC35F3 solute carrier family 35, member F3 0.0224756
RFX2 regulatory factor X, 2 (influences HLA class II expression) 0.0224189
SOX9 SRY (sex determining region Y)-box 9 0.0221996
ENO1 enolase 1, (alpha) 0.0218292
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.021601
APLP2 amyloid beta (A4) precursor-like protein 2 0.0215092
RPL31 ribosomal protein L31 0.0214495
HLA-A major histocompatibility complex, class I, A 0.0213474
FTH1 ferritin, heavy polypeptide 1 0.0212797
GRB10 growth factor receptor-bound protein 10 0.0211592
RPS12 ribosomal protein S12 0.0208626
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0205118
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.0195291
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein 0.0194942
HILPDA hypoxia inducible lipid droplet-associated 0.0191397
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0191322
ENO2 enolase 2 (gamma, neuronal) 0.0187534
CLIP2 CAP-GLY domain containing linker protein 2 0.0186107
AEBP2 AE binding protein 2 0.0185116
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0184389
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0181203
LRRC23 leucine rich repeat containing 23 0.0178064
ACTG1 actin gamma 1 0.0176817
SOX4 SRY (sex determining region Y)-box 4 0.0176254
TPI1 triosephosphate isomerase 1 0.017271
POTEF POTE ankyrin domain family, member F 0.0172342
PDLIM5 PDZ and LIM domain 5 0.0171856
IFI44L interferon-induced protein 44-like 0.0171355
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.016834
TTC19 tetratricopeptide repeat domain 19 0.0168252
MYOF myoferlin 0.0167195
JUN jun proto-oncogene 0.0165138
B2M beta-2-microglobulin 0.0164696
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0164011
NTN4 netrin 4 0.0163902
SPDYA speedy/RINGO cell cycle regulator family member A 0.0163829
RPS27 ribosomal protein S27 0.016272
RPS6 ribosomal protein S6 0.0162252
SH3KBP1 SH3-domain kinase binding protein 1 0.0161287
BRD2 bromodomain containing 2 0.0160753
MYADM myeloid-associated differentiation marker 0.0158875
AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 0.0154782
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0150603
ZFP36 ZFP36 ring finger protein 0.0150501
HMGA2 high mobility group AT-hook 2 0.0145201
GPATCH2L G patch domain containing 2-like 0.0143225
ABLIM1 actin binding LIM protein 1 0.0143223
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0142615
IL6 interleukin 6 0.0142148
UBAP2 ubiquitin associated protein 2 0.0140143
MCFD2 multiple coagulation factor deficiency 2 0.0140068
RASEF RAS and EF-hand domain containing 0.0139938
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0138944
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.0138255
RPL9 ribosomal protein L9 0.0138123
NXN nucleoredoxin 0.0135965
HLA-E major histocompatibility complex, class I, E 0.0135796
HOMER1 homer scaffolding protein 1 0.0135338
POU2F2 POU class 2 homeobox 2 0.0134997
RPS17 ribosomal protein S17 0.0134606
MAP1B microtubule-associated protein 1B 0.0134235
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0133473
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0133024
IGFBP3 insulin-like growth factor binding protein 3 0.0132821
HSPH1 heat shock 105kDa/110kDa protein 1 0.0132728
CCDC138 coiled-coil domain containing 138 0.0132228
RGS2 regulator of G-protein signaling 2 0.013135
RAB7A RAB7A, member RAS oncogene family 0.0130126

decreased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase -0.210901
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.141198
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.11092
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0889448
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0862284
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0778541
CANX calnexin -0.0759557
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0728907
RBM39 RNA binding motif protein 39 -0.0720231
FNDC3B fibronectin type III domain containing 3B -0.0707796
CENPF centromere protein F, 350/400kDa -0.0676798
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0641896
NDRG1 N-myc downstream regulated 1 -0.0640783
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0618093
AHR aryl hydrocarbon receptor -0.0575392
FN1 fibronectin 1 -0.0574581
OSMR oncostatin M receptor -0.0569536
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0560196
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0537233
OGA O-GlcNAcase -0.0536897
SMOX spermine oxidase -0.0532782
PRRC2C proline-rich coiled-coil 2C -0.0532374
CLTC clathrin, heavy chain (Hc) -0.0528498
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0527317
NEK7 NIMA-related kinase 7 -0.0520136
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.051621
MYH9 myosin, heavy chain 9, non-muscle -0.0514907
TXNIP thioredoxin interacting protein -0.0511339
MCTP2 multiple C2 domains, transmembrane 2 -0.0505074
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0498606
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0487857
ELL2 elongation factor, RNA polymerase II, 2 -0.0482801
ETNK1 ethanolamine kinase 1 -0.0471738
SMAD3 SMAD family member 3 -0.0464957
SPAG9 sperm associated antigen 9 -0.0449715
CD109 CD109 molecule -0.0448584
SUCO SUN domain containing ossification factor -0.0446757
MKI67 marker of proliferation Ki-67 -0.0440875
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.042517
KMT2E lysine (K)-specific methyltransferase 2E -0.041979
TPR translocated promoter region, nuclear basket protein -0.0419012
PTK2 protein tyrosine kinase 2 -0.0416078
FNBP1 formin binding protein 1 -0.0413805
ETV6 ets variant 6 -0.0410577
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.040804
WAC WW domain containing adaptor with coiled-coil -0.0399849
ITGA1 integrin, alpha 1 -0.0399075
ANLN anillin, actin binding protein -0.0398346
ZNF292 zinc finger protein 292 -0.0398254
KDM3A lysine (K)-specific demethylase 3A -0.0396394
TENT2 terminal nucleotidyltransferase 2 -0.039526
SEC23A Sec23 homolog A (S. cerevisiae) -0.0393413
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0390881
MARCHF6 membrane associated ring-CH-type finger 6 -0.0390182
PUM2 pumilio RNA-binding family member 2 -0.0390028
RNF145 ring finger protein 145 -0.0385171
TMEM165 transmembrane protein 165 -0.0383572
TFG TRK-fused gene -0.0371391
MIS18BP1 MIS18 binding protein 1 -0.0370854
GOLT1B golgi transport 1B -0.0369269
RUNX2 runt-related transcription factor 2 -0.0367408
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase -0.0367164
APP amyloid beta (A4) precursor protein -0.0364782
NRP1 neuropilin 1 -0.0364459
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0363477
PTBP3 polypyrimidine tract binding protein 3 -0.0361578
HELZ helicase with zinc finger -0.0360727
IL6ST interleukin 6 signal transducer -0.0360231
XPO1 exportin 1 -0.0355904
TM9SF3 transmembrane 9 superfamily member 3 -0.0353981
SOD2 superoxide dismutase 2, mitochondrial -0.0353695
ACBD3 acyl-CoA binding domain containing 3 -0.0352128
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0350425
NUP58 nucleoporin 58 -0.0350302
UGCG UDP-glucose ceramide glucosyltransferase -0.0349466
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0347452
NIPBL Nipped-B homolog (Drosophila) -0.0345793
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0344538
PELO pelota homolog (Drosophila) -0.0342556
WDR45B WD repeat domain 45B -0.0342421
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0342162
COPA coatomer protein complex, subunit alpha -0.0341779
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0341672
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0336126
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0334601
SOS1 son of sevenless homolog 1 (Drosophila) -0.0333089
CALU calumenin -0.0332034
LCORL ligand dependent nuclear receptor corepressor-like -0.0331978
CD44 CD44 molecule (Indian blood group) -0.0330443
JMJD1C jumonji domain containing 1C -0.0329844
NRIP1 nuclear receptor interacting protein 1 -0.0328721
CDC73 cell division cycle 73 -0.0327145
PTMA prothymosin, alpha -0.0326996
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 -0.0325506
ZFAND3 zinc finger, AN1-type domain 3 -0.0321968
TRIO trio Rho guanine nucleotide exchange factor -0.0321883
SMYD3 SET and MYND domain containing 3 -0.0321621
DUSP5 dual specificity phosphatase 5 -0.0321
COG5 component of oligomeric golgi complex 5 -0.0320971
CAB39 calcium binding protein 39 -0.0316026