Torkinib_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Torkinib perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Torkinib_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.173658
FN1 fibronectin 1 0.161377
CXCL8 chemokine (C-X-C motif) ligand 8 0.149923
LDHA lactate dehydrogenase A 0.111662
MT2A metallothionein 2A 0.105475
ENO1 enolase 1, (alpha) 0.0971498
SLC39A14 solute carrier family 39 (zinc transporter), member 14 0.0827124
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0801762
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0747972
STC1 stanniocalcin 1 0.0712523
FTH1 ferritin, heavy polypeptide 1 0.06818
CALR calreticulin 0.0667116
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0636562
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0605958
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0584031
MYH9 myosin, heavy chain 9, non-muscle 0.057509
ERRFI1 ERBB receptor feedback inhibitor 1 0.0562526
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0558292
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0551395
ANXA2 annexin A2 0.0538044
CD44 CD44 molecule (Indian blood group) 0.0527782
SOD2 superoxide dismutase 2, mitochondrial 0.0521645
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.05133
TM4SF1 transmembrane 4 L six family member 1 0.0481698
ICAM1 intercellular adhesion molecule 1 0.0462821
INHBA inhibin, beta A 0.0454354
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0452087
CAVIN1 caveolae associated protein 1 0.0415912
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0410082
ALCAM activated leukocyte cell adhesion molecule 0.0409
B2M beta-2-microglobulin 0.0396033
RPL12 ribosomal protein L12 0.0392192
COL3A1 collagen, type III, alpha 1 0.0388284
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0385017
SP100 SP100 nuclear antigen 0.0383695
APP amyloid beta (A4) precursor protein 0.0374193
RPS12 ribosomal protein S12 0.0366939
SQSTM1 sequestosome 1 0.0352223
HSPA8 heat shock 70kDa protein 8 0.0345111
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0342628
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.033852
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0334198
NFE2L1 nuclear factor, erythroid 2-like 1 0.0327948
RPS3 ribosomal protein S3 0.0324392
RPL7 ribosomal protein L7 0.0323291
CTSB cathepsin B 0.0319469
POSTN periostin, osteoblast specific factor 0.0318287
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0317483
RACK1 receptor for activated C kinase 1 0.0315996
BZW1 basic leucine zipper and W2 domains 1 0.0310029
TMSB4X thymosin beta 4, X-linked 0.0308414
PABPC1 poly(A) binding protein, cytoplasmic 1 0.030568
ARRDC3 arrestin domain containing 3 0.0301469
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0291022
IER3 immediate early response 3 0.0288535
MLF1 myeloid leukemia factor 1 0.0283437
FAT1 FAT atypical cadherin 1 0.0279499
LOX lysyl oxidase 0.0277934
SMAD3 SMAD family member 3 0.0277632
FAM107B family with sequence similarity 107, member B 0.0275486
RAD21 RAD21 homolog (S. pombe) 0.027155
ZBTB38 zinc finger and BTB domain containing 38 0.0271499
RPL26 ribosomal protein L26 0.0269596
TNIP1 TNFAIP3 interacting protein 1 0.0264384
CANX calnexin 0.0264377
CALU calumenin 0.0260858
LOC112694756 uncharaterized LOC112694756 0.0257545
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0256449
PDIA4 protein disulfide isomerase family A, member 4 0.0253912
NAP1L1 nucleosome assembly protein 1-like 1 0.0251893
RIGI RNA sensor RIG-I 0.0241092
EIF1 eukaryotic translation initiation factor 1 0.023975
SERINC1 serine incorporator 1 0.0239528
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0238507
HLA-E major histocompatibility complex, class I, E 0.0236817
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.023644
BHLHE40 basic helix-loop-helix family, member e40 0.0235294
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II 0.0233072
ADM adrenomedullin 0.0228601
POTEF POTE ankyrin domain family, member F 0.0226965
RPL11 ribosomal protein L11 0.0226221
RPL19 ribosomal protein L19 0.0221299
EIF4A2 eukaryotic translation initiation factor 4A2 0.0220307
TLN1 talin 1 0.021933
VIM vimentin 0.021933
SDC4 syndecan 4 0.0216232
IGFBP7 insulin-like growth factor binding protein 7 0.0215452
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0214055
RPLP0 ribosomal protein, large, P0 0.0211584
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.0211461
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0209155
LOC102724023 ES1 protein homolog, mitochondrial 0.0208347
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0206448
AHNAK AHNAK nucleoprotein 0.020601
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0205343
ACTG1 actin gamma 1 0.0204818
EEF2 eukaryotic translation elongation factor 2 0.020399
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0203825
WWTR1 WW domain containing transcription regulator 1 0.0202573
PKM pyruvate kinase, muscle 0.0199856

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.396887
NDRG1 N-myc downstream regulated 1 -0.212504
VEGFA vascular endothelial growth factor A -0.124538
COL1A1 collagen, type I, alpha 1 -0.121914
PSD3 pleckstrin and Sec7 domain containing 3 -0.109681
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.106605
CDH13 cadherin 13 -0.0967457
DPYD dihydropyrimidine dehydrogenase -0.0857586
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0776121
COL5A1 collagen, type V, alpha 1 -0.0753257
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.074546
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0697894
COL1A2 collagen, type I, alpha 2 -0.0677521
CADM1 cell adhesion molecule 1 -0.0643213
COL7A1 collagen, type VII, alpha 1 -0.0556886
ZBTB20 zinc finger and BTB domain containing 20 -0.0511937
TRPS1 trichorhinophalangeal syndrome I -0.0473999
PDE10A phosphodiesterase 10A -0.0467236
FNDC3B fibronectin type III domain containing 3B -0.0429625
PDE4D phosphodiesterase 4D, cAMP-specific -0.0402349
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0398686
EGR1 early growth response 1 -0.0389378
TMSB10 thymosin beta 10 -0.0362986
TMEM165 transmembrane protein 165 -0.036286
EGFR epidermal growth factor receptor -0.0357303
SMYD3 SET and MYND domain containing 3 -0.03367
JARID2 jumonji, AT rich interactive domain 2 -0.0336687
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.032869
COL6A2 collagen, type VI, alpha 2 -0.0327402
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0320244
GOLGA4 golgin A4 -0.0315468
SLC38A2 solute carrier family 38, member 2 -0.0304999
EFNA5 ephrin-A5 -0.0301144
TSC22D2 TSC22 domain family, member 2 -0.0300819
CMIP c-Maf inducing protein -0.0297485
MRPS6 mitochondrial ribosomal protein S6 -0.0296164
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0294873
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0291455
HSPG2 heparan sulfate proteoglycan 2 -0.0288126
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0287328
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0277324
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0274628
PRKCA protein kinase C, alpha -0.0269156
NALF1 NALCN channel auxiliary factor 1 -0.02635
DOCK5 dedicator of cytokinesis 5 -0.0261228
TGFBI transforming growth factor, beta-induced, 68kDa -0.0260277
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0259996
PDLIM5 PDZ and LIM domain 5 -0.0257657
SBF2 SET binding factor 2 -0.0257362
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0255393
KDM4C lysine (K)-specific demethylase 4C -0.0255307
TENM3 teneurin transmembrane protein 3 -0.0249112
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0247591
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0245903
TRAM1 translocation associated membrane protein 1 -0.0245237
RRBP1 ribosome binding protein 1 -0.0244012
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.024314
COL6A1 collagen, type VI, alpha 1 -0.0241439
CYB5R3 cytochrome b5 reductase 3 -0.0240149
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0238897
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) -0.0237566
CALD1 caldesmon 1 -0.0235792
ANKRD11 ankyrin repeat domain 11 -0.0233565
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.02282
VCL vinculin -0.022737
TPM2 tropomyosin 2 (beta) -0.0227295
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 -0.0225716
F3 coagulation factor III (thromboplastin, tissue factor) -0.0225696
MTDH metadherin -0.0225256
GLIS3 GLIS family zinc finger 3 -0.0224898
IARS1 isoleucyl-tRNA synthetase 1 -0.0223753
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0223634
TBC1D23 TBC1 domain family, member 23 -0.0223459
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0222813
RAB6A RAB6A, member RAS oncogene family -0.0221903
ZFPM2 zinc finger protein, FOG family member 2 -0.02194
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0219143
LAMA5 laminin, alpha 5 -0.0217609
CD109 CD109 molecule -0.0214928
KIF13A kinesin family member 13A -0.0211908
PTPRG protein tyrosine phosphatase, receptor type, G -0.0210377
ATXN1 ataxin 1 -0.020958
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0209317
TTC3 tetratricopeptide repeat domain 3 -0.0209208
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit -0.0208714
RUNX1 runt-related transcription factor 1 -0.0208384
FOXP1 forkhead box P1 -0.0208233
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.020703
EXT1 exostosin glycosyltransferase 1 -0.0205987
KMT2E lysine (K)-specific methyltransferase 2E -0.020569
MAML2 mastermind-like 2 (Drosophila) -0.0205551
MYADM myeloid-associated differentiation marker -0.0204248
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0201087
TPM1 tropomyosin 1 (alpha) -0.0201078
ZNF644 zinc finger protein 644 -0.0197822
NKAIN3 Na+/K+ transporting ATPase interacting 3 -0.019725
KMT2C lysine (K)-specific methyltransferase 2C -0.0196382
PRELID2 PRELI domain containing 2 -0.0195006
AFF3 AF4/FMR2 family, member 3 -0.0194461
PTK2 protein tyrosine kinase 2 -0.0194192