Torkinib_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Torkinib perturbation in KATO III cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Torkinib_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.170961
LMO7 LIM domain 7 0.160416
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.144087
EZR ezrin 0.131032
FTH1 ferritin, heavy polypeptide 1 0.10239
MBNL2 muscleblind-like splicing regulator 2 0.0978985
ANXA1 annexin A1 0.0869545
MYOF myoferlin 0.0817834
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.078531
AREG amphiregulin 0.072293
ATXN1 ataxin 1 0.0711898
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0709825
ERRFI1 ERBB receptor feedback inhibitor 1 0.0673778
ENO1 enolase 1, (alpha) 0.064343
KLHL29 kelch-like family member 29 0.0641351
LCN2 lipocalin 2 0.0639664
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0604065
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0598988
PDIA4 protein disulfide isomerase family A, member 4 0.0583774
TES testin LIM domain protein 0.0582634
KLF5 Kruppel-like factor 5 (intestinal) 0.0580909
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0577323
GDA guanine deaminase 0.0555179
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0535578
FTL ferritin, light polypeptide 0.0532581
HSPA8 heat shock 70kDa protein 8 0.0519103
MYH9 myosin, heavy chain 9, non-muscle 0.0512732
FNDC3B fibronectin type III domain containing 3B 0.0500947
AKAP13 A kinase (PRKA) anchor protein 13 0.0491521
ASPH aspartate beta-hydroxylase 0.0480833
SQSTM1 sequestosome 1 0.0466602
ATF4 activating transcription factor 4 0.0457466
PTPRK protein tyrosine phosphatase, receptor type, K 0.0453703
GOLGB1 golgin B1 0.0452099
DSPP dentin sialophosphoprotein 0.0446982
INTS6 integrator complex subunit 6 0.0441602
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0440801
EIF1 eukaryotic translation initiation factor 1 0.0431522
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0430689
GCLC glutamate-cysteine ligase, catalytic subunit 0.0424765
ZSWIM6 zinc finger, SWIM-type containing 6 0.0421914
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0409949
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0408687
HKDC1 hexokinase domain containing 1 0.0404928
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0401319
SLC38A1 solute carrier family 38, member 1 0.0398766
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0395774
LOC102724023 ES1 protein homolog, mitochondrial 0.03775
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0369088
SET SET nuclear proto-oncogene 0.0368689
HM13 histocompatibility (minor) 13 0.0364295
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0362777
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0361477
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0359677
KRT18 keratin 18, type I 0.0359592
ARHGAP29 Rho GTPase activating protein 29 0.035884
MAML2 mastermind-like 2 (Drosophila) 0.0358241
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0358051
NFE2L1 nuclear factor, erythroid 2-like 1 0.0357717
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0355466
APLP2 amyloid beta (A4) precursor-like protein 2 0.0355178
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 0.0341028
RPS12 ribosomal protein S12 0.0340705
ANKRD11 ankyrin repeat domain 11 0.0332266
SLC38A2 solute carrier family 38, member 2 0.0332167
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0331211
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0326671
DSTN destrin (actin depolymerizing factor) 0.0323324
SMAD3 SMAD family member 3 0.0318702
DOCK5 dedicator of cytokinesis 5 0.0316904
CATSPERB catsper channel auxiliary subunit beta 0.0315402
EXT1 exostosin glycosyltransferase 1 0.0312516
HDAC9 histone deacetylase 9 0.0303056
MYO1E myosin IE 0.0295976
NCEH1 neutral cholesterol ester hydrolase 1 0.0295654
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0292123
ANXA2 annexin A2 0.0291817
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0290975
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough 0.0290353
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0288533
RASEF RAS and EF-hand domain containing 0.0288524
HYOU1 hypoxia up-regulated 1 0.0288136
FNIP1 folliculin interacting protein 1 0.0286128
EMP1 epithelial membrane protein 1 0.0284293
GARS1 glycyl-tRNA synthetase 1 0.0281935
SPDYA speedy/RINGO cell cycle regulator family member A 0.0274534
TJP1 tight junction protein 1 0.0273237
MYO5B myosin VB 0.0271731
CALR calreticulin 0.026744
FRMD5 FERM domain containing 5 0.0267323
SIK3 SIK family kinase 3 0.0266084
TAC4 tachykinin 4 (hemokinin) 0.0265512
FAM107B family with sequence similarity 107, member B 0.0260253
PGK1 phosphoglycerate kinase 1 0.0259704
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0258949
TXNRD1 thioredoxin reductase 1 0.025701
TOM1L2 target of myb1-like 2 (chicken) 0.0252648
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0251904
SOX4 SRY (sex determining region Y)-box 4 0.0251633
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0248816

decreased expression

Symbol Name Standardized Value
NPSR1 neuropeptide S receptor 1 -0.171866
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.109632
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0934713
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0875975
CEMIP cell migration inducing protein, hyaluronan binding -0.0805186
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0708748
PRSS3 protease, serine, 3 -0.0643628
GMDS GDP-mannose 4,6-dehydratase -0.0625378
ITGB4 integrin, beta 4 -0.062175
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0593779
MUC17 mucin 17, cell surface associated -0.0582797
SAMD12 sterile alpha motif domain containing 12 -0.0546756
PDIA3 protein disulfide isomerase family A, member 3 -0.0507147
H1-0 H1.0 linker histone -0.0499896
ACSS2 acyl-CoA synthetase short-chain family member 2 -0.0487961
CD46 CD46 molecule, complement regulatory protein -0.0473883
INSIG1 insulin induced gene 1 -0.0464486
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.0445434
DLG1 discs, large homolog 1 (Drosophila) -0.0432984
FLNB filamin B, beta -0.0426256
GPX2 glutathione peroxidase 2 -0.0419409
AVL9 AVL9 homolog (S. cerevisiase) -0.0408222
ACACA acetyl-CoA carboxylase alpha -0.0407249
MUC1 mucin 1, cell surface associated -0.0406374
RRBP1 ribosome binding protein 1 -0.0392426
S100A6 S100 calcium binding protein A6 -0.0387968
LOC112694756 uncharaterized LOC112694756 -0.0386165
TMEM45B transmembrane protein 45B -0.0375518
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0372827
CD2AP CD2-associated protein -0.0362382
CCNL1 cyclin L1 -0.0360502
MSI2 musashi RNA-binding protein 2 -0.0355224
FASN fatty acid synthase -0.0351305
FGFR2 fibroblast growth factor receptor 2 -0.0339321
ZNF292 zinc finger protein 292 -0.0338269
SREBF2 sterol regulatory element binding transcription factor 2 -0.0336166
FDFT1 farnesyl-diphosphate farnesyltransferase 1 -0.0328298
NPEPPS aminopeptidase puromycin sensitive -0.0315374
PLSCR1 phospholipid scramblase 1 -0.0312137
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0310619
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0309779
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0308002
MON2 MON2 homolog (S. cerevisiae) -0.0299297
CASK calcium/calmodulin-dependent serine protein kinase (MAGUK family) -0.0296794
RNF43 ring finger protein 43 -0.0295625
ANLN anillin, actin binding protein -0.0289597
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0288886
AOPEP aminopeptidase O (putative) -0.0286558
GSK3B glycogen synthase kinase 3 beta -0.0286174
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0285865
RNF213 ring finger protein 213 -0.0277035
ACTN4 actinin, alpha 4 -0.0276634
LYZ lysozyme -0.0276581
RAB6A RAB6A, member RAS oncogene family -0.0272115
ETNK1 ethanolamine kinase 1 -0.0267881
IFI27 interferon, alpha-inducible protein 27 -0.0266451
LPIN1 lipin 1 -0.0263733
PIAS1 protein inhibitor of activated STAT, 1 -0.0259369
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0258831
SHB Src homology 2 domain containing adaptor protein B -0.0257387
MECOM MDS1 and EVI1 complex locus -0.0255635
NCOR1 nuclear receptor corepressor 1 -0.0255356
ACSL1 acyl-CoA synthetase long-chain family member 1 -0.0254195
SPINT2 serine peptidase inhibitor, Kunitz type, 2 -0.0253322
ST14 suppression of tumorigenicity 14 (colon carcinoma) -0.0249324
TRIM31 tripartite motif containing 31 -0.0248775
MSMO1 methylsterol monooxygenase 1 -0.0245901
ETV6 ets variant 6 -0.0245317
ITFG1 integrin alpha FG-GAP repeat containing 1 -0.0244354
TNRC18 trinucleotide repeat containing 18 -0.0243462
NECTIN2 nectin cell adhesion molecule 2 -0.0242178
BIRC6 baculoviral IAP repeat containing 6 -0.024138
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) -0.0236989
SMC4 structural maintenance of chromosomes 4 -0.0236572
RREB1 ras responsive element binding protein 1 -0.0233929
HMGA1 high mobility group AT-hook 1 -0.0232813
GNAS GNAS complex locus -0.0230329
ABHD17C abhydrolase domain containing 17C -0.0229247
C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 -0.0228601
TTYH3 tweety family member 3 -0.0224417
ZC3H12B zinc finger CCCH-type containing 12B -0.0223977
LAMA5 laminin, alpha 5 -0.0222841
SRPK2 SRSF protein kinase 2 -0.022133
NPC1 Niemann-Pick disease, type C1 -0.0220913
NF1 neurofibromin 1 -0.0219856
CTSE cathepsin E -0.0219018
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0218932
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein -0.021836
PLS1 plastin 1 -0.0215391
SHROOM3 shroom family member 3 -0.0214381
WWC1 WW and C2 domain containing 1 -0.0213664
TAPBP TAP binding protein (tapasin) -0.0212891
CCDC146 coiled-coil domain containing 146 -0.0210986
PRRC2B proline-rich coiled-coil 2B -0.0210484
SNX13 sorting nexin 13 -0.0209295
JUP junction plakoglobin -0.0208815
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0208787
WDR45B WD repeat domain 45B -0.0208347
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0207846
SMC5 structural maintenance of chromosomes 5 -0.0207385