Torkinib_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Torkinib perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Torkinib_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0849697
CXCL8 chemokine (C-X-C motif) ligand 8 0.0832178
ENO1 enolase 1, (alpha) 0.0774451
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0755372
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.071073
FTH1 ferritin, heavy polypeptide 1 0.0707306
MCL1 myeloid cell leukemia 1 0.0673203
GRAMD1B GRAM domain containing 1B 0.0640835
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0600207
CEMIP cell migration inducing protein, hyaluronan binding 0.0597518
MYOF myoferlin 0.0559964
HSPA8 heat shock 70kDa protein 8 0.0541548
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0498769
RPS3 ribosomal protein S3 0.0461936
PCBP2 poly(rC) binding protein 2 0.0434168
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0428006
RPS12 ribosomal protein S12 0.0391026
POTEF POTE ankyrin domain family, member F 0.0388253
SIK3 SIK family kinase 3 0.0381018
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0372146
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0351663
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0348176
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0346539
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0344169
SAMD4A sterile alpha motif domain containing 4A 0.0338933
SMAD3 SMAD family member 3 0.0337232
STC1 stanniocalcin 1 0.0336359
TNFAIP8 tumor necrosis factor, alpha-induced protein 8 0.0336176
ERRFI1 ERBB receptor feedback inhibitor 1 0.0333552
RPL37A ribosomal protein L37a 0.0321067
CUL4A cullin 4A 0.031024
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.030529
RPL3 ribosomal protein L3 0.0294996
RPS6 ribosomal protein S6 0.0283163
RPS4X ribosomal protein S4, X-linked 0.0282683
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0280782
LOC112694756 uncharaterized LOC112694756 0.027594
MLF1 myeloid leukemia factor 1 0.0275918
SOD2 superoxide dismutase 2, mitochondrial 0.0274597
SLTM SAFB-like, transcription modulator 0.0273594
HOMER1 homer scaffolding protein 1 0.0271079
ATF4 activating transcription factor 4 0.0269846
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0269162
RPL7 ribosomal protein L7 0.0268837
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0268623
RPL11 ribosomal protein L11 0.0267068
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0265972
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0260106
HBP1 HMG-box transcription factor 1 0.0256194
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0254452
RPS17 ribosomal protein S17 0.0254144
AKAP12 A kinase (PRKA) anchor protein 12 0.025146
RPS8 ribosomal protein S8 0.0249466
ENSA endosulfine alpha 0.0247976
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0246012
RPS27 ribosomal protein S27 0.0242586
RPLP1 ribosomal protein, large, P1 0.02394
EIF5 eukaryotic translation initiation factor 5 0.0234653
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0230288
ATF6 activating transcription factor 6 0.0229218
EZR ezrin 0.0229177
C15ORF48 chromosome 15 open reading frame 48 0.022749
SMYD3 SET and MYND domain containing 3 0.0226699
ARRDC3 arrestin domain containing 3 0.0225716
USP9X ubiquitin specific peptidase 9, X-linked 0.0224374
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0224268
RPLP0 ribosomal protein, large, P0 0.0223771
RPL12 ribosomal protein L12 0.0218977
HYOU1 hypoxia up-regulated 1 0.0218578
MT2A metallothionein 2A 0.0218208
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0216562
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0215195
FAM107B family with sequence similarity 107, member B 0.0214322
TBC1D15 TBC1 domain family, member 15 0.0214076
PYGL phosphorylase, glycogen, liver 0.0211649
RACK1 receptor for activated C kinase 1 0.0208994
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0208971
FNIP1 folliculin interacting protein 1 0.0206447
MYH9 myosin, heavy chain 9, non-muscle 0.020599
GOLGB1 golgin B1 0.0203068
EXT1 exostosin glycosyltransferase 1 0.020211
BMP6 bone morphogenetic protein 6 0.0201287
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0198045
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0197972
PM20D1 peptidase M20 domain containing 1 0.0197411
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0196654
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0196378
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0196122
ELL2 elongation factor, RNA polymerase II, 2 0.0194864
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0194619
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0194011
RAD51B RAD51 paralog B 0.0192279
EEF2 eukaryotic translation elongation factor 2 0.0191294
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0191107
MSN moesin 0.01905
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma 0.0187655
GPC5 glypican 5 0.0186814
ANO6 anoctamin 6 0.018369
TMCO3 transmembrane and coiled-coil domains 3 0.0183131
NFE2L1 nuclear factor, erythroid 2-like 1 0.0182853

decreased expression

Symbol Name Standardized Value
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.165765
TXNRD1 thioredoxin reductase 1 -0.159696
PTPRM protein tyrosine phosphatase, receptor type, M -0.135269
LRP1B low density lipoprotein receptor-related protein 1B -0.127384
EGFR epidermal growth factor receptor -0.11868
ASPH aspartate beta-hydroxylase -0.117494
LAMC2 laminin, gamma 2 -0.115859
NDRG1 N-myc downstream regulated 1 -0.111062
CAV1 caveolin 1, caveolae protein, 22kDa -0.0917622
LMO7 LIM domain 7 -0.0902433
TMSB10 thymosin beta 10 -0.0805075
H1-0 H1.0 linker histone -0.0797512
OSMR oncostatin M receptor -0.0796965
AHNAK AHNAK nucleoprotein -0.0731215
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0636405
EFNA5 ephrin-A5 -0.0622085
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0621361
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0600369
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0590233
ZMYND8 zinc finger, MYND-type containing 8 -0.0589073
PDLIM5 PDZ and LIM domain 5 -0.0564444
EGR1 early growth response 1 -0.0560373
PATJ PATJ crumbs cell polarity complex component -0.0554289
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.055076
THSD4 thrombospondin, type I, domain containing 4 -0.0541606
TMEM165 transmembrane protein 165 -0.0536467
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0535614
ACTG1 actin gamma 1 -0.0528728
PKM pyruvate kinase, muscle -0.0510529
SCEL sciellin -0.0504172
VCL vinculin -0.0501286
ANXA2 annexin A2 -0.0491344
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.046911
CES1 carboxylesterase 1 -0.0455652
WASF2 WAS protein family, member 2 -0.0445345
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0439503
GSK3B glycogen synthase kinase 3 beta -0.0432962
TPT1 tumor protein, translationally-controlled 1 -0.0429399
AKR1C1 aldo-keto reductase family 1, member C1 -0.0426331
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0419027
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0416011
USP53 ubiquitin specific peptidase 53 -0.0402725
NAMPT nicotinamide phosphoribosyltransferase -0.0400447
FBXO11 F-box protein 11 -0.0399909
ARHGAP32 Rho GTPase activating protein 32 -0.0398282
BRWD3 bromodomain and WD repeat domain containing 3 -0.0393941
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0384052
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0382228
CUX1 cut-like homeobox 1 -0.0380833
S100A10 S100 calcium binding protein A10 -0.0377105
GNAS GNAS complex locus -0.0375267
CCND1 cyclin D1 -0.0367963
LAMA4 laminin, alpha 4 -0.0367378
CCNL1 cyclin L1 -0.0366806
PRKCA protein kinase C, alpha -0.0365299
MGAT4C MGAT4 family, member C -0.0363708
BIRC3 baculoviral IAP repeat containing 3 -0.0363113
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0353865
MYO1D myosin ID -0.0352496
NABP1 nucleic acid binding protein 1 -0.0351982
MKI67 marker of proliferation Ki-67 -0.0351702
DOCK5 dedicator of cytokinesis 5 -0.0349404
ZMYM2 zinc finger, MYM-type 2 -0.0349348
RAB27B RAB27B, member RAS oncogene family -0.0338106
PDE8A phosphodiesterase 8A -0.0334721
LPP LIM domain containing preferred translocation partner in lipoma -0.0331145
AGR2 anterior gradient 2 -0.0327648
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.032733
BRWD1 bromodomain and WD repeat domain containing 1 -0.0327085
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0323645
NRIP1 nuclear receptor interacting protein 1 -0.0320831
RIN2 Ras and Rab interactor 2 -0.031991
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0315545
MAML3 mastermind-like 3 (Drosophila) -0.0311938
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 -0.0311705
ZFAND6 zinc finger, AN1-type domain 6 -0.030779
TNS3 tensin 3 -0.0307685
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0307025
RAB10 RAB10, member RAS oncogene family -0.030613
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0305932
NT5C2 5'-nucleotidase, cytosolic II -0.0305038
KCMF1 potassium channel modulatory factor 1 -0.0303776
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0302581
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0301396
ANKHD1 ankyrin repeat and KH domain containing 1 -0.029882
BIRC6 baculoviral IAP repeat containing 6 -0.0289319
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0288202
ST14 suppression of tumorigenicity 14 (colon carcinoma) -0.0286213
MCTP1 multiple C2 domains, transmembrane 1 -0.0284591
RAB1A RAB1A, member RAS oncogene family -0.0281506
IGFBP3 insulin-like growth factor binding protein 3 -0.0279133
LIMCH1 LIM and calponin homology domains 1 -0.0279021
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0278816
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.027434
LAMB3 laminin, beta 3 -0.0273127
NCOA7 nuclear receptor coactivator 7 -0.0272816
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0272355
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0265933
BBX bobby sox homolog (Drosophila) -0.026492
NCOA3 nuclear receptor coactivator 3 -0.0264028