Torkinib_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Torkinib perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Torkinib_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.181074
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.136987
AKAP12 A kinase (PRKA) anchor protein 12 0.105027
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.104407
VIM vimentin 0.096502
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0865627
STC1 stanniocalcin 1 0.0775363
MT2A metallothionein 2A 0.0581167
PM20D1 peptidase M20 domain containing 1 0.0572056
TPM3 tropomyosin 3 0.0544249
RPS12 ribosomal protein S12 0.053664
FAM107B family with sequence similarity 107, member B 0.0527128
SMOC1 SPARC related modular calcium binding 1 0.051852
POTEF POTE ankyrin domain family, member F 0.0516537
TPI1 triosephosphate isomerase 1 0.0515943
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0488371
KIF5B kinesin family member 5B 0.0488088
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0486814
LDHA lactate dehydrogenase A 0.0474838
BASP1 brain abundant, membrane attached signal protein 1 0.0460129
C15ORF48 chromosome 15 open reading frame 48 0.0446749
ERRFI1 ERBB receptor feedback inhibitor 1 0.0443219
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0442376
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0441412
HSPA8 heat shock 70kDa protein 8 0.0440927
FMNL2 formin-like 2 0.043061
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0419141
ENO1 enolase 1, (alpha) 0.0389026
RPL3 ribosomal protein L3 0.0389007
MACF1 microtubule-actin crosslinking factor 1 0.0372045
APLP2 amyloid beta (A4) precursor-like protein 2 0.0365945
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0362872
PCBP2 poly(rC) binding protein 2 0.0360423
SERINC3 serine incorporator 3 0.0356276
RPLP0 ribosomal protein, large, P0 0.0352979
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0352589
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0350624
MYOF myoferlin 0.0350145
TIMP1 TIMP metallopeptidase inhibitor 1 0.0348121
ARHGAP26 Rho GTPase activating protein 26 0.0344515
ELL2 elongation factor, RNA polymerase II, 2 0.0342932
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0338895
ZSWIM6 zinc finger, SWIM-type containing 6 0.0336371
LOC102724023 ES1 protein homolog, mitochondrial 0.033608
ASPH aspartate beta-hydroxylase 0.0334458
LAMC2 laminin, gamma 2 0.0327164
SOD2 superoxide dismutase 2, mitochondrial 0.0327035
MSN moesin 0.0315677
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0309977
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0309802
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0306348
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0305901
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0305506
FLNB filamin B, beta 0.0304722
SPDYA speedy/RINGO cell cycle regulator family member A 0.0303172
SFTPA2 surfactant protein A2 0.0302563
MYH9 myosin, heavy chain 9, non-muscle 0.0302209
ANO6 anoctamin 6 0.0294961
EPAS1 endothelial PAS domain protein 1 0.0294844
SFPQ splicing factor proline/glutamine-rich 0.0290669
B2M beta-2-microglobulin 0.0290399
AKAP13 A kinase (PRKA) anchor protein 13 0.0285995
SLC39A14 solute carrier family 39 (zinc transporter), member 14 0.0284571
IDS iduronate 2-sulfatase 0.02838
CALR calreticulin 0.0280379
EZR ezrin 0.0278498
PYGL phosphorylase, glycogen, liver 0.0277589
TLN1 talin 1 0.0266219
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0263567
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0262238
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0261644
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0261232
RPL12 ribosomal protein L12 0.0252666
RPL37A ribosomal protein L37a 0.0250613
NFE2L1 nuclear factor, erythroid 2-like 1 0.024529
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0243512
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0243154
LPP LIM domain containing preferred translocation partner in lipoma 0.0242741
SERINC1 serine incorporator 1 0.024183
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0232189
MCFD2 multiple coagulation factor deficiency 2 0.0228642
ATF4 activating transcription factor 4 0.0222625
WAC WW domain containing adaptor with coiled-coil 0.0221792
AP2M1 adaptor-related protein complex 2, mu 1 subunit 0.0221682
ANXA1 annexin A1 0.0220526
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0218524
ZC3H11A zinc finger CCCH-type containing 11A 0.0217091
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0216248
PRDX1 peroxiredoxin 1 0.0215263
RPS3 ribosomal protein S3 0.0213871
RACK1 receptor for activated C kinase 1 0.0213331
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0210783
TMSB10 thymosin beta 10 0.020902
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0201328
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0200041
ADM adrenomedullin 0.0199687
RPS17 ribosomal protein S17 0.0198287
S100A6 S100 calcium binding protein A6 0.019671
RPS18 ribosomal protein S18 0.0195203
DHRS7 dehydrogenase/reductase (SDR family) member 7 0.0193717

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.365893
IGF2 insulin-like growth factor 2 -0.12898
TXNRD1 thioredoxin reductase 1 -0.127902
TM4SF1 transmembrane 4 L six family member 1 -0.103434
GRAMD1B GRAM domain containing 1B -0.0991585
TFPI2 tissue factor pathway inhibitor 2 -0.0866648
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.075876
ACTG1 actin gamma 1 -0.0697764
RPS21 ribosomal protein S21 -0.0622593
EGR1 early growth response 1 -0.0584057
PTMA prothymosin, alpha -0.0573183
RPL35A ribosomal protein L35a -0.0563755
RTN4 reticulon 4 -0.0556273
IER3 immediate early response 3 -0.0522298
WDR43 WD repeat domain 43 -0.051125
HDAC9 histone deacetylase 9 -0.0501015
EIF1 eukaryotic translation initiation factor 1 -0.0499113
RPS29 ribosomal protein S29 -0.0490942
TPT1 tumor protein, translationally-controlled 1 -0.0473148
BICC1 BicC family RNA binding protein 1 -0.0471334
DENND4A DENN/MADD domain containing 4A -0.044922
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0434536
FUS FUS RNA binding protein -0.0431507
RPS15 ribosomal protein S15 -0.0430287
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0422739
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.041634
BABAM2 BRISC and BRCA1 A complex member 2 -0.0402774
RPS23 ribosomal protein S23 -0.0389452
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0388746
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0377135
SLC38A2 solute carrier family 38, member 2 -0.0371631
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0370163
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0367057
RPL34 ribosomal protein L34 -0.0366361
RBM39 RNA binding motif protein 39 -0.0365791
RPL8 ribosomal protein L8 -0.0360772
SRGN serglycin -0.0353647
KHDC4 KH domain containing 4, pre-mRNA splicing factor -0.0352216
FBXO11 F-box protein 11 -0.0349227
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0339009
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0335671
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0335571
RPS11 ribosomal protein S11 -0.0328425
IGFBP4 insulin-like growth factor binding protein 4 -0.0320015
DEK DEK proto-oncogene -0.0317754
GNAS GNAS complex locus -0.0315236
RPS5 ribosomal protein S5 -0.0314161
ANKRD28 ankyrin repeat domain 28 -0.0310988
ZNF292 zinc finger protein 292 -0.0306596
BIRC3 baculoviral IAP repeat containing 3 -0.0306263
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0305439
RHOA ras homolog family member A -0.0304352
RPS24 ribosomal protein S24 -0.0304258
RPS8 ribosomal protein S8 -0.0301304
NCOA7 nuclear receptor coactivator 7 -0.030096
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0298691
OSMR oncostatin M receptor -0.0297056
EFNA5 ephrin-A5 -0.0293212
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.029191
NOP58 NOP58 ribonucleoprotein -0.0291713
USP3 ubiquitin specific peptidase 3 -0.0286001
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0285059
HMGA1 high mobility group AT-hook 1 -0.0281792
RFWD3 ring finger and WD repeat domain 3 -0.0280006
PDE8A phosphodiesterase 8A -0.0279752
FKBP10 FK506 binding protein 10, 65 kDa -0.0279628
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0278277
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0278115
BIRC2 baculoviral IAP repeat containing 2 -0.0277999
WTAP Wilms tumor 1 associated protein -0.0277081
ADGRG6 adhesion G protein-coupled receptor G6 -0.0276294
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0276135
ATP5F1B ATP synthase F1 subunit beta -0.0274398
ERBIN erbb2 interacting protein -0.027423
YBX3 Y box binding protein 3 -0.0270167
MKI67 marker of proliferation Ki-67 -0.0268323
AK1 adenylate kinase 1 -0.0268004
RPL4 ribosomal protein L4 -0.0260662
KLF6 Kruppel-like factor 6 -0.0257671
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0257423
COG5 component of oligomeric golgi complex 5 -0.0256914
DGKD diacylglycerol kinase, delta 130kDa -0.0249583
RPL38 ribosomal protein L38 -0.0249013
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0248987
PKM pyruvate kinase, muscle -0.0247407
PTK2 protein tyrosine kinase 2 -0.0246357
MYL12B myosin, light chain 12B, regulatory -0.0245672
FTL ferritin, light polypeptide -0.0244982
KMT2E lysine (K)-specific methyltransferase 2E -0.0242861
RAD21 RAD21 homolog (S. pombe) -0.0240604
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.024013
FAM168A family with sequence similarity 168, member A -0.0239813
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0238739
WASF2 WAS protein family, member 2 -0.023626
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0231297
NAV3 neuron navigator 3 -0.0230741
CHN1 chimerin 1 -0.0230696
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0230661
SETD5 SET domain containing 5 -0.0227576
KPNB1 karyopherin (importin) beta 1 -0.022683