Torkinib_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Torkinib perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Torkinib_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 0.29982
KYNU kynureninase 0.236923
PDE4D phosphodiesterase 4D, cAMP-specific 0.190627
TXNRD1 thioredoxin reductase 1 0.167425
GRB10 growth factor receptor-bound protein 10 0.142148
ARHGAP21 Rho GTPase activating protein 21 0.117301
ASPH aspartate beta-hydroxylase 0.115786
LMO7 LIM domain 7 0.104248
KRT17 keratin 17, type I 0.0898134
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0879704
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0839968
B2M beta-2-microglobulin 0.0787575
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0744264
PARD3 par-3 family cell polarity regulator 0.0737071
ANXA1 annexin A1 0.0731984
SACK1A scaffolding CK1 anchoring protein A 0.0721045
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0676971
OSMR oncostatin M receptor 0.0660735
LAMC2 laminin, gamma 2 0.062728
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0626934
NAMPT nicotinamide phosphoribosyltransferase 0.062214
ENO1 enolase 1, (alpha) 0.0599922
UBE2H ubiquitin-conjugating enzyme E2H 0.0599356
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0594897
FNDC3B fibronectin type III domain containing 3B 0.0572759
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0571428
VMP1 vacuole membrane protein 1 0.0570746
EFNA5 ephrin-A5 0.056473
PLAUR plasminogen activator, urokinase receptor 0.0552595
MYOF myoferlin 0.0535165
POTEF POTE ankyrin domain family, member F 0.053294
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0522979
AKR1C2 aldo-keto reductase family 1, member C2 0.0491392
EXT1 exostosin glycosyltransferase 1 0.0487031
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0474207
ISG15 ISG15 ubiquitin-like modifier 0.0472868
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0466715
F3 coagulation factor III (thromboplastin, tissue factor) 0.0460111
FN1 fibronectin 1 0.0456035
SLC12A6 solute carrier family 12 (potassium/chloride transporter), member 6 0.044982
SEPTIN9 septin 9 0.0446336
STC1 stanniocalcin 1 0.0440522
RBM47 RNA binding motif protein 47 0.0424148
BACE2 beta-site APP-cleaving enzyme 2 0.0407521
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 0.0407193
GLCCI1 glucocorticoid induced 1 0.0407039
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) 0.0405301
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 0.040478
PICALM phosphatidylinositol binding clathrin assembly protein 0.040422
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.040302
RICTOR RPTOR independent companion of MTOR, complex 2 0.0398894
RPL26 ribosomal protein L26 0.0396651
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0390864
PTK2 protein tyrosine kinase 2 0.0385583
RPL12 ribosomal protein L12 0.0383881
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0381944
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0381795
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 0.0380757
CLIC4 chloride intracellular channel 4 0.0375594
NFE2L2 nuclear factor, erythroid 2-like 2 0.036994
NPEPPS aminopeptidase puromycin sensitive 0.0361255
CEP350 centrosomal protein 350kDa 0.0352757
SMAD3 SMAD family member 3 0.0349157
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.0347791
PTPRM protein tyrosine phosphatase, receptor type, M 0.0345708
GRAMD1B GRAM domain containing 1B 0.0345209
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0342302
RPS14 ribosomal protein S14 0.0341511
RCOR1 REST corepressor 1 0.0340937
SOD2 superoxide dismutase 2, mitochondrial 0.0336811
JMJD1C jumonji domain containing 1C 0.0334576
ELL2 elongation factor, RNA polymerase II, 2 0.0328424
AKR1C1 aldo-keto reductase family 1, member C1 0.0327656
S100A10 S100 calcium binding protein A10 0.0326893
ANTXR2 anthrax toxin receptor 2 0.0325167
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0323604
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0321153
TUSC3 tumor suppressor candidate 3 0.0319654
SSH2 slingshot protein phosphatase 2 0.0318345
LRMDA leucine rich melanocyte differentiation associated 0.031432
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0313942
HLA-A major histocompatibility complex, class I, A 0.0309881
FDPS farnesyl diphosphate synthase 0.0309213
MT2A metallothionein 2A 0.0305668
PM20D1 peptidase M20 domain containing 1 0.0304479
STK24 serine/threonine kinase 24 0.0303899
UBE3A ubiquitin protein ligase E3A 0.0300611
CLIP1 CAP-GLY domain containing linker protein 1 0.0300163
SCAF11 SR-related CTD-associated factor 11 0.0297859
RACK1 receptor for activated C kinase 1 0.0297857
STAU2 staufen double-stranded RNA binding protein 2 0.0296153
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0293098
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0292401
ZMIZ1 zinc finger, MIZ-type containing 1 0.0292399
RPS16 ribosomal protein S16 0.0291505
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B 0.0289445
AHNAK AHNAK nucleoprotein 0.0285137
MACF1 microtubule-actin crosslinking factor 1 0.0281823
DLG1 discs, large homolog 1 (Drosophila) 0.0281032
EEF2 eukaryotic translation elongation factor 2 0.0276626

decreased expression

Symbol Name Standardized Value
SPAG9 sperm associated antigen 9 -0.0795977
IFIH1 interferon induced with helicase C domain 1 -0.0784481
TRA2A transformer 2 alpha homolog (Drosophila) -0.0596414
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0592628
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0556905
FNDC3A fibronectin type III domain containing 3A -0.0544139
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0516062
COPA coatomer protein complex, subunit alpha -0.05096
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0487172
MUC16 mucin 16, cell surface associated -0.047432
PAPOLA poly(A) polymerase alpha -0.0472367
NDRG1 N-myc downstream regulated 1 -0.046859
TMEM165 transmembrane protein 165 -0.0468463
ZFAND3 zinc finger, AN1-type domain 3 -0.0464477
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) -0.0457634
NPTN neuroplastin -0.0428543
CDK13 cyclin-dependent kinase 13 -0.0414858
ARID4B AT rich interactive domain 4B (RBP1-like) -0.041207
PDE10A phosphodiesterase 10A -0.0408586
SEC31A SEC31 homolog A (S. cerevisiae) -0.0406351
KPNB1 karyopherin (importin) beta 1 -0.0405292
CREBBP CREB binding protein -0.0404685
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0400102
RTN4 reticulon 4 -0.0399475
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0395662
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0386818
GNAS GNAS complex locus -0.0386723
RAB1A RAB1A, member RAS oncogene family -0.0384348
MORC3 MORC family CW-type zinc finger 3 -0.0383617
YME1L1 YME1-like 1 ATPase -0.0378878
ANKRD28 ankyrin repeat domain 28 -0.0374412
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0370928
CDH13 cadherin 13 -0.0368329
KMT2E lysine (K)-specific methyltransferase 2E -0.0366235
RALA v-ral simian leukemia viral oncogene homolog A (ras related) -0.0363781
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 -0.0363439
ACTG1 actin gamma 1 -0.0359734
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0359691
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.035692
TUFT1 tuftelin 1 -0.0353759
AKAP12 A kinase (PRKA) anchor protein 12 -0.0353279
PSD3 pleckstrin and Sec7 domain containing 3 -0.0352591
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0351513
GNL2 guanine nucleotide binding protein-like 2 (nucleolar) -0.0348672
HECTD4 HECT domain containing E3 ubiquitin protein ligase 4 -0.0346951
ARHGEF4 Rho guanine nucleotide exchange factor (GEF) 4 -0.0346308
EGR1 early growth response 1 -0.0342622
ZFC3H1 zinc finger, C3H1-type containing -0.0336986
FRYL FRY-like -0.0334672
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0333539
SH3GLB1 SH3-domain GRB2-like endophilin B1 -0.0331383
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0329314
GIGYF2 GRB10 interacting GYF protein 2 -0.0328392
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0325728
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0325629
RBM5 RNA binding motif protein 5 -0.0323236
POU2F1 POU class 2 homeobox 1 -0.0322567
GLG1 golgi glycoprotein 1 -0.0321466
MYO9A myosin IXA -0.0321237
FLNB filamin B, beta -0.0320653
THSD4 thrombospondin, type I, domain containing 4 -0.0319039
MBD5 methyl-CpG binding domain protein 5 -0.0318744
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0317315
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 -0.031579
SLMAP sarcolemma associated protein -0.0314612
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0311389
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0307015
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0306741
CHD1 chromodomain helicase DNA binding protein 1 -0.0303503
FGF13 fibroblast growth factor 13 -0.0303024
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1 -0.0301964
SVIL supervillin -0.0301673
TSC22D2 TSC22 domain family, member 2 -0.0301375
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0300623
VIM vimentin -0.029919
TNRC6C trinucleotide repeat containing 6C -0.0297565
TPP2 tripeptidyl peptidase II -0.0296205
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0294227
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0293366
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0293305
PCCA propionyl CoA carboxylase, alpha polypeptide -0.0292453
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0291805
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 -0.0289534
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) -0.0289279
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease -0.0288154
PALS2 protein associated with LIN7 2, MAGUK p55 family member -0.0287361
CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 -0.028674
MRTFA myocardin related transcription factor A -0.0284505
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0284222
ZNF451 zinc finger protein 451 -0.0283672
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) -0.0283536
ITCH itchy E3 ubiquitin protein ligase -0.0283143
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0282909
ANXA3 annexin A3 -0.0282748
HDAC4 histone deacetylase 4 -0.028177
RPLP0 ribosomal protein, large, P0 -0.0280511
AFF4 AF4/FMR2 family, member 4 -0.0278381
CCDC6 coiled-coil domain containing 6 -0.0278112
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0277848
PHF21A PHD finger protein 21A -0.0277115