Torkinib_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Torkinib perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Torkinib_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SPTBN1 spectrin, beta, non-erythrocytic 1 0.112548
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.1112
MYOF myoferlin 0.110905
BZW1 basic leucine zipper and W2 domains 1 0.106847
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.100006
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0998391
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0984286
LDHA lactate dehydrogenase A 0.096453
RGS2 regulator of G-protein signaling 2 0.0914838
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0779585
CXCL8 chemokine (C-X-C motif) ligand 8 0.0762594
NAMPT nicotinamide phosphoribosyltransferase 0.0753948
TM4SF1 transmembrane 4 L six family member 1 0.0746138
ENO1 enolase 1, (alpha) 0.0736959
PGK1 phosphoglycerate kinase 1 0.0730681
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0704684
ASPH aspartate beta-hydroxylase 0.0700768
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0688195
PM20D1 peptidase M20 domain containing 1 0.0686945
SH3KBP1 SH3-domain kinase binding protein 1 0.0669645
RPS12 ribosomal protein S12 0.0659294
COL8A1 collagen, type VIII, alpha 1 0.0589677
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0586265
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0572883
RPLP0 ribosomal protein, large, P0 0.0556213
NFE2L2 nuclear factor, erythroid 2-like 2 0.0545038
RAB3B RAB3B, member RAS oncogene family 0.05273
EZR ezrin 0.0526548
HSPA8 heat shock 70kDa protein 8 0.0510409
RPL12 ribosomal protein L12 0.0494659
STC1 stanniocalcin 1 0.0488514
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0484064
GRAMD1B GRAM domain containing 1B 0.0479856
NAP1L1 nucleosome assembly protein 1-like 1 0.047326
RACK1 receptor for activated C kinase 1 0.0470585
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.046221
KYNU kynureninase 0.0453451
TPT1 tumor protein, translationally-controlled 1 0.0450703
EIF1 eukaryotic translation initiation factor 1 0.0448716
GDA guanine deaminase 0.044542
RPS3 ribosomal protein S3 0.0428323
TXNRD1 thioredoxin reductase 1 0.0426335
ERRFI1 ERBB receptor feedback inhibitor 1 0.0425459
TGFBR1 transforming growth factor, beta receptor 1 0.0412645
LOC102724023 ES1 protein homolog, mitochondrial 0.0407954
ELL2 elongation factor, RNA polymerase II, 2 0.0386188
ANXA2 annexin A2 0.0371998
ZBTB38 zinc finger and BTB domain containing 38 0.036685
NCOA7 nuclear receptor coactivator 7 0.0362962
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0357979
INHBA inhibin, beta A 0.0350024
CANX calnexin 0.0349716
B2M beta-2-microglobulin 0.0347301
DDIT4 DNA-damage-inducible transcript 4 0.0346471
SQSTM1 sequestosome 1 0.0345113
RPL26 ribosomal protein L26 0.0341417
SET SET nuclear proto-oncogene 0.0339379
OGA O-GlcNAcase 0.0338743
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.032956
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0324353
TFPI2 tissue factor pathway inhibitor 2 0.0323948
DGKD diacylglycerol kinase, delta 130kDa 0.0315483
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0313089
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0311686
PDIA4 protein disulfide isomerase family A, member 4 0.0309788
VDAC1 voltage-dependent anion channel 1 0.0292333
SAMD4A sterile alpha motif domain containing 4A 0.0290663
ZC3H11A zinc finger CCCH-type containing 11A 0.0290218
RPS4X ribosomal protein S4, X-linked 0.0283262
RPS27A ribosomal protein S27a 0.0282483
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0281748
TPI1 triosephosphate isomerase 1 0.0275769
NRCAM neuronal cell adhesion molecule 0.0270915
IFIH1 interferon induced with helicase C domain 1 0.0267408
RPL19 ribosomal protein L19 0.026721
NFE2L1 nuclear factor, erythroid 2-like 1 0.0261633
KDM3A lysine (K)-specific demethylase 3A 0.0259489
BLTP2 bridge-like lipid transfer protein family member 2 0.0256666
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0256444
RPL4 ribosomal protein L4 0.0256208
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0253642
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0248864
SPAG9 sperm associated antigen 9 0.0247962
BDNF brain-derived neurotrophic factor 0.0246202
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0245618
CDK6 cyclin-dependent kinase 6 0.024465
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0244249
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0240167
FTH1 ferritin, heavy polypeptide 1 0.0240058
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked 0.0236049
NQO1 NAD(P)H dehydrogenase, quinone 1 0.0235004
MT2A metallothionein 2A 0.0234007
ANXA1 annexin A1 0.0233587
NEK7 NIMA-related kinase 7 0.0231204
ZEB2 zinc finger E-box binding homeobox 2 0.0228109
KPNB1 karyopherin (importin) beta 1 0.0227581
LOC112694756 uncharaterized LOC112694756 0.0225508
TMSB4X thymosin beta 4, X-linked 0.0222284
FTL ferritin, light polypeptide 0.0217554
RPL7 ribosomal protein L7 0.0217355

decreased expression

Symbol Name Standardized Value
NALF1 NALCN channel auxiliary factor 1 -0.126518
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.113212
PDE4D phosphodiesterase 4D, cAMP-specific -0.110328
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0906678
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0898499
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0822493
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0806889
EFNA5 ephrin-A5 -0.0761056
AUTS2 autism susceptibility candidate 2 -0.0742954
SMYD3 SET and MYND domain containing 3 -0.0729192
CDH13 cadherin 13 -0.0656716
RAD51B RAD51 paralog B -0.060397
TTC28 tetratricopeptide repeat domain 28 -0.0584125
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0574577
LAMA5 laminin, alpha 5 -0.0522543
RPS6 ribosomal protein S6 -0.0519362
DPP10 dipeptidyl-peptidase 10 (non-functional) -0.048842
FNDC3B fibronectin type III domain containing 3B -0.0471798
TMSB10 thymosin beta 10 -0.0471344
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0454547
MAML3 mastermind-like 3 (Drosophila) -0.0438572
NCKAP5 NCK-associated protein 5 -0.0429788
MCL1 myeloid cell leukemia 1 -0.0428826
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0405313
BABAM2 BRISC and BRCA1 A complex member 2 -0.0395488
ADGRD1 adhesion G protein-coupled receptor D1 -0.0391866
PTPRM protein tyrosine phosphatase, receptor type, M -0.037939
CTNND2 catenin (cadherin-associated protein), delta 2 -0.0375245
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0369884
CUX1 cut-like homeobox 1 -0.0367283
BCAS3 breast carcinoma amplified sequence 3 -0.0360057
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0343015
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0339598
RPS23 ribosomal protein S23 -0.0333369
PRKN parkin RBR E3 ubiquitin protein ligase -0.0328928
EXOC4 exocyst complex component 4 -0.0327121
PDE10A phosphodiesterase 10A -0.0324348
TENM3 teneurin transmembrane protein 3 -0.0320737
IGFBP3 insulin-like growth factor binding protein 3 -0.0318931
SMOC1 SPARC related modular calcium binding 1 -0.0318853
CADM2 cell adhesion molecule 2 -0.0316893
PTEN phosphatase and tensin homolog -0.0316402
DENND1A DENN/MADD domain containing 1A -0.0306204
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0298737
LAMB1 laminin, beta 1 -0.0295575
COL4A6 collagen, type IV, alpha 6 -0.0288052
RPS19 ribosomal protein S19 -0.0278644
HDAC4 histone deacetylase 4 -0.0275889
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0275875
RANBP17 RAN binding protein 17 -0.0274889
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0267148
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0262569
THSD4 thrombospondin, type I, domain containing 4 -0.0259821
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0252151
ZNF638 zinc finger protein 638 -0.0250136
DIAPH2 diaphanous-related formin 2 -0.0248587
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0243501
TMEM165 transmembrane protein 165 -0.0242281
GABRE gamma-aminobutyric acid (GABA) A receptor, epsilon -0.0242015
FBXO11 F-box protein 11 -0.0241102
RPS21 ribosomal protein S21 -0.0239587
PCDH15 protocadherin-related 15 -0.0239112
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0236142
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0235047
LIMCH1 LIM and calponin homology domains 1 -0.0233466
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0233393
ZBTB20 zinc finger and BTB domain containing 20 -0.0232241
SDK1 sidekick cell adhesion molecule 1 -0.0231247
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0229974
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0229839
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0229598
GRB10 growth factor receptor-bound protein 10 -0.0227225
LSAMP limbic system-associated membrane protein -0.0226175
ASTN2 astrotactin 2 -0.0225166
SOX6 SRY (sex determining region Y)-box 6 -0.0225023
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0217377
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0216086
JMJD1C jumonji domain containing 1C -0.0214648
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0213155
RPS11 ribosomal protein S11 -0.0213
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.020986
ZNF207 zinc finger protein 207 -0.0209722
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0204439
ZFHX3 zinc finger homeobox 3 -0.0203521
PRKCA protein kinase C, alpha -0.0202804
RPL34 ribosomal protein L34 -0.0200939
PFN1 profilin 1 -0.0199574
SCARB1 scavenger receptor class B, member 1 -0.0199358
PSD3 pleckstrin and Sec7 domain containing 3 -0.0197589
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0197459
GPC6 glypican 6 -0.0194053
SRPK2 SRSF protein kinase 2 -0.0192791
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0190634
KMT2E lysine (K)-specific methyltransferase 2E -0.0188682
ARB2A ARB2 cotranscriptional regulator A -0.0188181
KDM4C lysine (K)-specific demethylase 4C -0.0188052
PUM2 pumilio RNA-binding family member 2 -0.0185518
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0182979
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.018248
FSTL4 follistatin-like 4 -0.0182477