Torkinib_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Torkinib perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Torkinib_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL11A1 collagen, type XI, alpha 1 0.185211
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 0.114227
NTM neurotrimin 0.101928
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0892042
CADM2 cell adhesion molecule 2 0.0883539
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0793687
COL5A2 collagen, type V, alpha 2 0.0793441
COL3A1 collagen, type III, alpha 1 0.0722308
ENO1 enolase 1, (alpha) 0.0693628
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0661844
TENM3 teneurin transmembrane protein 3 0.058958
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.058817
POTEF POTE ankyrin domain family, member F 0.0528819
ADGRV1 adhesion G protein-coupled receptor V1 0.0514961
LDHA lactate dehydrogenase A 0.0510072
XPO1 exportin 1 0.0503395
SRP54 signal recognition particle 54kDa 0.0501482
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0495392
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0494434
HMCN1 hemicentin 1 0.0474709
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0474326
ERBB4 erb-b2 receptor tyrosine kinase 4 0.046536
PCDH18 protocadherin 18 0.0464302
BBX bobby sox homolog (Drosophila) 0.046057
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0460541
DDIT4 DNA-damage-inducible transcript 4 0.0454772
TOP2A topoisomerase (DNA) II alpha 170kDa 0.042653
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0413707
RPLP0 ribosomal protein, large, P0 0.0408757
FNDC3B fibronectin type III domain containing 3B 0.0397001
ANK2 ankyrin 2, neuronal 0.0388728
RPS3 ribosomal protein S3 0.0385052
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0384668
SETD2 SET domain containing 2 0.0383139
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0380844
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0378646
ZNF608 zinc finger protein 608 0.037628
APLP2 amyloid beta (A4) precursor-like protein 2 0.0372704
ITGAV integrin, alpha V 0.036678
ADGRL2 adhesion G protein-coupled receptor L2 0.0359644
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0356895
ZSWIM6 zinc finger, SWIM-type containing 6 0.0352888
ARRDC3 arrestin domain containing 3 0.0351786
PCBP2 poly(rC) binding protein 2 0.0349622
NCAM2 neural cell adhesion molecule 2 0.0344175
NHSL1 NHS-like 1 0.0343676
EXOC4 exocyst complex component 4 0.0343498
CALR calreticulin 0.0343094
GLS2 glutaminase 2 (liver, mitochondrial) 0.0339301
HDAC9 histone deacetylase 9 0.0333423
NFIA nuclear factor I/A 0.0329832
PCLO piccolo presynaptic cytomatrix protein 0.0329738
NFE2L1 nuclear factor, erythroid 2-like 1 0.0325782
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0322873
RPS4X ribosomal protein S4, X-linked 0.031841
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0313004
ERRFI1 ERBB receptor feedback inhibitor 1 0.0312623
MYO10 myosin X 0.0311241
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0311156
PDIA4 protein disulfide isomerase family A, member 4 0.0308849
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0305921
RAD51B RAD51 paralog B 0.0302653
GPC4 glypican 4 0.0302453
HAT1 histone acetyltransferase 1 0.029588
FER fer (fps/fes related) tyrosine kinase 0.0295843
TTC3 tetratricopeptide repeat domain 3 0.0294247
SKIL SKI-like proto-oncogene 0.029095
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0288082
G3BP2 GTPase activating protein (SH3 domain) binding protein 2 0.0288073
PHF21A PHD finger protein 21A 0.0286896
TOX thymocyte selection-associated high mobility group box 0.0286061
CUX1 cut-like homeobox 1 0.0284969
CCDC88A coiled-coil domain containing 88A 0.0284841
RPL12 ribosomal protein L12 0.0282755
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0280259
SREBF2 sterol regulatory element binding transcription factor 2 0.0280201
PRKCSH protein kinase C substrate 80K-H 0.0278287
STAG2 stromal antigen 2 0.0276979
ZFR zinc finger RNA binding protein 0.0271522
YAP1 Yes-associated protein 1 0.0271062
NALF1 NALCN channel auxiliary factor 1 0.027053
SMC1A structural maintenance of chromosomes 1A 0.0269974
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0268867
BRCA1 breast cancer 1, early onset 0.0267909
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0267438
HMGB2 high mobility group box 2 0.0265757
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0264287
EEF1G eukaryotic translation elongation factor 1 gamma 0.0263998
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 0.0263067
HELZ helicase with zinc finger 0.0262314
EGFR epidermal growth factor receptor 0.0262207
NCOA2 nuclear receptor coactivator 2 0.0261133
EZR ezrin 0.026104
RSRC2 arginine/serine-rich coiled-coil 2 0.0258651
PCDH9 protocadherin 9 0.0257196
MKI67 marker of proliferation Ki-67 0.0256465
SERINC1 serine incorporator 1 0.0256317
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0255681
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0253374
UTRN utrophin 0.0252514

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.170449
TSC22D2 TSC22 domain family, member 2 -0.110286
SPAG9 sperm associated antigen 9 -0.0994712
ZFAND3 zinc finger, AN1-type domain 3 -0.0939083
KMT2C lysine (K)-specific methyltransferase 2C -0.074273
ANKRD33B ankyrin repeat domain 33B -0.07034
GALNTL6 polypeptide N-acetylgalactosaminyltransferase-like 6 -0.0685412
ZNF292 zinc finger protein 292 -0.0684684
COL1A2 collagen, type I, alpha 2 -0.0663938
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0656002
RPS16 ribosomal protein S16 -0.0604038
ZNF217 zinc finger protein 217 -0.0584589
STRN3 striatin, calmodulin binding protein 3 -0.0559432
NRG1 neuregulin 1 -0.0552326
PGAP1 post-GPI attachment to proteins 1 -0.0534726
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.052851
PEG10 paternally expressed 10 -0.0525104
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0524066
EMP1 epithelial membrane protein 1 -0.052224
RPL35A ribosomal protein L35a -0.0514202
GPC3 glypican 3 -0.0510456
MAP4 microtubule-associated protein 4 -0.0506241
USP3 ubiquitin specific peptidase 3 -0.050031
ATP5F1B ATP synthase F1 subunit beta -0.0497319
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.049525
ISG15 ISG15 ubiquitin-like modifier -0.0489844
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0488396
B2M beta-2-microglobulin -0.0478691
TPT1 tumor protein, translationally-controlled 1 -0.0477163
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0458509
H1-0 H1.0 linker histone -0.0451945
MED13L mediator complex subunit 13-like -0.0443817
VIM vimentin -0.0442782
RTN4 reticulon 4 -0.0434449
FBXO11 F-box protein 11 -0.0416602
EIF1 eukaryotic translation initiation factor 1 -0.0412358
RIGI RNA sensor RIG-I -0.0400132
JMJD1C jumonji domain containing 1C -0.0399832
RHEB Ras homolog enriched in brain -0.03969
MRPS30 mitochondrial ribosomal protein S30 -0.0395778
CAVIN1 caveolae associated protein 1 -0.0392777
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0392147
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0390733
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0390282
WDR43 WD repeat domain 43 -0.0389721
MDK midkine (neurite growth-promoting factor 2) -0.0388975
MB21D2 Mab-21 domain containing 2 -0.0388881
CABLES1 Cdk5 and Abl enzyme substrate 1 -0.038576
TTC28 tetratricopeptide repeat domain 28 -0.0380333
MRPS6 mitochondrial ribosomal protein S6 -0.0373386
PFN1 profilin 1 -0.0371247
ZNF207 zinc finger protein 207 -0.03644
ADGRL3 adhesion G protein-coupled receptor L3 -0.0363567
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0362907
TMSB10 thymosin beta 10 -0.0360443
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0358466
CDC73 cell division cycle 73 -0.0358144
PDS5A PDS5 cohesin associated factor A -0.0356119
ENAH enabled homolog (Drosophila) -0.035543
RBM39 RNA binding motif protein 39 -0.0355021
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0351249
YES1 YES proto-oncogene 1, Src family tyrosine kinase -0.0350765
FAM171B family with sequence similarity 171, member B -0.0350518
FOXK1 forkhead box K1 -0.0348895
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0338573
GNAS GNAS complex locus -0.0338209
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0337292
ANKRD12 ankyrin repeat domain 12 -0.0336306
RSL1D1 ribosomal L1 domain containing 1 -0.0336157
HNRNPK heterogeneous nuclear ribonucleoprotein K -0.0335613
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.033338
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa -0.0330828
QKI QKI, KH domain containing, RNA binding -0.0329604
FNDC3A fibronectin type III domain containing 3A -0.0328609
URI1 URI1, prefoldin-like chaperone -0.0323848
S100A10 S100 calcium binding protein A10 -0.0320277
SEPTIN7 septin 7 -0.031981
IQGAP1 IQ motif containing GTPase activating protein 1 -0.031692
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0313195
ZC3H15 zinc finger CCCH-type containing 15 -0.0312933
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0311746
KMT2E lysine (K)-specific methyltransferase 2E -0.0307919
HMGA1 high mobility group AT-hook 1 -0.0305679
CCNY cyclin Y -0.0300688
SCAF11 SR-related CTD-associated factor 11 -0.030026
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0299499
UGCG UDP-glucose ceramide glucosyltransferase -0.0297465
TRIO trio Rho guanine nucleotide exchange factor -0.0295741
RBM25 RNA binding motif protein 25 -0.0295703
MYADM myeloid-associated differentiation marker -0.0294579
TMEM123 transmembrane protein 123 -0.0294502
COTL1 coactosin-like F-actin binding protein 1 -0.0291616
MYL12B myosin, light chain 12B, regulatory -0.0291206
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0290536
LHFPL6 LHFPL tetraspan subfamily member 6 -0.0287085
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0286448
RPS6 ribosomal protein S6 -0.0281376
CERT1 ceramide transporter 1 -0.0276566
SRPK2 SRSF protein kinase 2 -0.0274935
ADNP activity-dependent neuroprotector homeobox -0.0274576