Trametinib (DMSO_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trametinib (DMSO perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trametinib (DMSO_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.126757
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.091147
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0662728
FLNB filamin B, beta 0.0624953
FBN1 fibrillin 1 0.0562363
AKAP12 A kinase (PRKA) anchor protein 12 0.0524769
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0501595
LOXL2 lysyl oxidase-like 2 0.0494046
NAV2 neuron navigator 2 0.0418574
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.0371125
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0368477
SEPTIN9 septin 9 0.0366831
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0363761
SBF2 SET binding factor 2 0.0357947
OGA O-GlcNAcase 0.0355415
PSD3 pleckstrin and Sec7 domain containing 3 0.0313221
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.030689
DPYSL2 dihydropyrimidinase-like 2 0.0290601
SQSTM1 sequestosome 1 0.0277086
CD109 CD109 molecule 0.0266163
FNIP1 folliculin interacting protein 1 0.0258438
ARRDC3 arrestin domain containing 3 0.0240581
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0239496
ANKRD36 ankyrin repeat domain 36 0.0238146
RUNX1 runt-related transcription factor 1 0.0230487
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0223746
OPTN optineurin 0.0218249
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0216923
FTH1 ferritin, heavy polypeptide 1 0.0216169
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.0213114
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0208519
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0207817
BACE2 beta-site APP-cleaving enzyme 2 0.0203106
ZEB1 zinc finger E-box binding homeobox 1 0.0199831
ATP13A3 ATPase type 13A3 0.0198778
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0191672
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0191342
FBXL7 F-box and leucine-rich repeat protein 7 0.0190015
ZNF292 zinc finger protein 292 0.0187895
ADM adrenomedullin 0.0186679
ZBTB7C zinc finger and BTB domain containing 7C 0.0185954
TNIP1 TNFAIP3 interacting protein 1 0.0185642
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0183672
WDFY1 WD repeat and FYVE domain containing 1 0.0181602
TTC3 tetratricopeptide repeat domain 3 0.0181285
KMT2E lysine (K)-specific methyltransferase 2E 0.0177786
YEATS2 YEATS domain containing 2 0.0173703
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 0.0171381
WSB1 WD repeat and SOCS box containing 1 0.0169324
TPM3 tropomyosin 3 0.0168165
THBS2 thrombospondin 2 0.0167745
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0165395
NGLY1 N-glycanase 1 0.0164199
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.01612
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0159734
NAP1L4 nucleosome assembly protein 1-like 4 0.0158982
SH3BP5 SH3-domain binding protein 5 (BTK-associated) 0.0157157
ARHGAP12 Rho GTPase activating protein 12 0.0155902
CAMSAP2 calmodulin regulated spectrin-associated protein family, member 2 0.0155314
MYH9 myosin, heavy chain 9, non-muscle 0.0154797
CLIP2 CAP-GLY domain containing linker protein 2 0.0151625
EEF2 eukaryotic translation elongation factor 2 0.0151567
RASA2 RAS p21 protein activator 2 0.0150992
SHB Src homology 2 domain containing adaptor protein B 0.0150133
SP3 Sp3 transcription factor 0.0148124
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0146136
MIMS1 mitochondrial inner membrane scaffold 1 0.0144362
BCL2L1 BCL2-like 1 0.0144304
IQSEC1 IQ motif and Sec7 domain 1 0.0143568
FNBP1 formin binding protein 1 0.0141622
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0141442
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0139977
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0139062
CD44 CD44 molecule (Indian blood group) 0.0137981
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0137893
GOLGA4 golgin A4 0.013735
ANKRD36C ankyrin repeat domain 36C 0.0135753
INSIG1 insulin induced gene 1 0.0135657
KDM3A lysine (K)-specific demethylase 3A 0.013536
MTCL1 microtubule crosslinking factor 1 0.0134548
MXI1 MAX interactor 1, dimerization protein 0.013322
NDST1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 0.0131803
VEGFA vascular endothelial growth factor A 0.0131018
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0128601
PFKP phosphofructokinase, platelet 0.0127783
RNMT RNA (guanine-7-) methyltransferase 0.012777
UGCG UDP-glucose ceramide glucosyltransferase 0.0127657
AVL9 AVL9 homolog (S. cerevisiase) 0.0127403
UBA6 ubiquitin-like modifier activating enzyme 6 0.0127094
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0126229
FNBP4 formin binding protein 4 0.0125733
RNF168 ring finger protein 168, E3 ubiquitin protein ligase 0.0125515
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0124822
PCGF5 polycomb group ring finger 5 0.0123546
ADAR adenosine deaminase, RNA-specific 0.0123202
ZMIZ1 zinc finger, MIZ-type containing 1 0.0122611
INSIG2 insulin induced gene 2 0.012204
RHOBTB3 Rho-related BTB domain containing 3 0.0121867
IRF2BP2 interferon regulatory factor 2 binding protein 2 0.0121041
STK10 serine/threonine kinase 10 0.0119446

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.196417
VIM vimentin -0.183974
IGFBP3 insulin-like growth factor binding protein 3 -0.16831
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.165046
MAP1B microtubule-associated protein 1B -0.123775
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.119568
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0979789
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0943385
S100A10 S100 calcium binding protein A10 -0.0831766
FN1 fibronectin 1 -0.0815542
LOX lysyl oxidase -0.0676872
ABI3BP ABI family, member 3 (NESH) binding protein -0.0642283
SAMD9 sterile alpha motif domain containing 9 -0.0636481
SLC38A1 solute carrier family 38, member 1 -0.0595768
PLAT plasminogen activator, tissue -0.0583088
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0556312
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0550012
S100A6 S100 calcium binding protein A6 -0.0513528
DIRAS3 DIRAS family, GTP-binding RAS-like 3 -0.0487063
TAGLN2 transgelin 2 -0.0476198
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0464391
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0462344
ASPH aspartate beta-hydroxylase -0.0456312
HLA-B major histocompatibility complex, class I, B -0.0444917
B2M beta-2-microglobulin -0.0442411
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0427045
SUCNR1 succinate receptor 1 -0.0422811
NAV1 neuron navigator 1 -0.0420664
HSPB1 heat shock 27kDa protein 1 -0.0420317
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0414289
SH3KBP1 SH3-domain kinase binding protein 1 -0.0399871
IFI16 interferon, gamma-inducible protein 16 -0.0387261
ALCAM activated leukocyte cell adhesion molecule -0.0365922
TRIO trio Rho guanine nucleotide exchange factor -0.0365062
MT2A metallothionein 2A -0.036413
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0362483
PRSS23 protease, serine, 23 -0.0357003
CSTB cystatin B (stefin B) -0.0348262
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0347295
CDH13 cadherin 13 -0.0346626
SP100 SP100 nuclear antigen -0.0330281
LRRC17 leucine rich repeat containing 17 -0.0329997
RIGI RNA sensor RIG-I -0.0326532
DST dystonin -0.0308011
IFITM3 interferon induced transmembrane protein 3 -0.030049
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0297973
SORBS2 sorbin and SH3 domain containing 2 -0.028951
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.028298
MX2 MX dynamin-like GTPase 2 -0.0270462
ISG15 ISG15 ubiquitin-like modifier -0.0266411
ANXA2 annexin A2 -0.0261693
POTEF POTE ankyrin domain family, member F -0.0257848
CAVIN1 caveolae associated protein 1 -0.0254561
LMNA lamin A/C -0.0253337
IL7R interleukin 7 receptor -0.0252758
OASL 2'-5'-oligoadenylate synthetase-like -0.0250918
WARS1 tryptophanyl-tRNA synthetase 1 -0.0240425
ARL15 ADP-ribosylation factor-like 15 -0.0238701
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0237418
PRRC2C proline-rich coiled-coil 2C -0.0236609
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0235593
TMSB4X thymosin beta 4, X-linked -0.0235513
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0235254
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0233406
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0230264
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0229816
CDK6 cyclin-dependent kinase 6 -0.0227364
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0225398
S100A11 S100 calcium binding protein A11 -0.0224482
COL1A1 collagen, type I, alpha 1 -0.0221143
TENM3 teneurin transmembrane protein 3 -0.0220294
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0220211
TUBB4B tubulin, beta 4B class IVb -0.0218551
ARID5B AT rich interactive domain 5B (MRF1-like) -0.0217608
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0216782
PKM pyruvate kinase, muscle -0.0216561
KRT81 keratin 81, type II -0.0216515
HLA-C major histocompatibility complex, class I, C -0.021623
RASAL2 RAS protein activator like 2 -0.0215453
DGKG diacylglycerol kinase, gamma 90kDa -0.0213278
CUX1 cut-like homeobox 1 -0.0210931
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0209531
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0208986
S100A4 S100 calcium binding protein A4 -0.0207968
BSG basigin (Ok blood group) -0.0207494
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 -0.0206048
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0204438
VCL vinculin -0.0202665
FLT1 fms-related tyrosine kinase 1 -0.0202225
LOC112694756 uncharaterized LOC112694756 -0.0200717
SOD2 superoxide dismutase 2, mitochondrial -0.0200187
MT1X metallothionein 1X -0.0199721
TPM4 tropomyosin 4 -0.019434
FSTL1 follistatin-like 1 -0.01923
SLC38A2 solute carrier family 38, member 2 -0.0187833
ANKRD11 ankyrin repeat domain 11 -0.0185176
PFN1 profilin 1 -0.0182881
EGR1 early growth response 1 -0.0182362
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0177293
SEPTIN7 septin 7 -0.0177288