Trametinib (DMSO_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trametinib (DMSO perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trametinib (DMSO_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TENM3 teneurin transmembrane protein 3 0.18627
ERBB4 erb-b2 receptor tyrosine kinase 4 0.164758
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 0.113996
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.107085
ANXA1 annexin A1 0.105321
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 0.0992078
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0935182
CPOX coproporphyrinogen oxidase 0.0732039
SYT1 synaptotagmin I 0.0729383
NLGN1 neuroligin 1 0.0727566
MGAT4C MGAT4 family, member C 0.0722672
EEF2 eukaryotic translation elongation factor 2 0.0693096
EPHA5 EPH receptor A5 0.066604
EPHA6 EPH receptor A6 0.065624
DST dystonin 0.065148
CALR calreticulin 0.0646717
PDGFC platelet derived growth factor C 0.0642853
CNRIP1 cannabinoid receptor interacting protein 1 0.0617101
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0607485
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0604622
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0589265
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0588974
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.058184
CXADR coxsackie virus and adenovirus receptor 0.056839
NRXN3 neurexin 3 0.0545912
AHNAK AHNAK nucleoprotein 0.0542498
MED13L mediator complex subunit 13-like 0.0538869
HSPB1 heat shock 27kDa protein 1 0.0521113
PDE4D phosphodiesterase 4D, cAMP-specific 0.052083
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0504421
FSTL5 follistatin-like 5 0.0503924
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0499027
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0484806
CCSER1 coiled-coil serine-rich protein 1 0.0473427
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0452163
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0447094
PCBP2 poly(rC) binding protein 2 0.0440672
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0435496
CDK6 cyclin-dependent kinase 6 0.0425819
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0410891
CANX calnexin 0.041063
AXIN2 axin 2 0.0386464
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0382386
ZNF292 zinc finger protein 292 0.0375854
TPI1 triosephosphate isomerase 1 0.0368561
ZBTB20 zinc finger and BTB domain containing 20 0.0368243
RPS12 ribosomal protein S12 0.0355439
LPP LIM domain containing preferred translocation partner in lipoma 0.0353256
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0334585
NEBL nebulette 0.0333161
PDK4 pyruvate dehydrogenase kinase, isozyme 4 0.0328816
PTMA prothymosin, alpha 0.0326622
LRRTM4 leucine rich repeat transmembrane neuronal 4 0.0323912
RPS8 ribosomal protein S8 0.0320194
EIF4A2 eukaryotic translation initiation factor 4A2 0.0317383
EXOC6B exocyst complex component 6B 0.0311109
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0309588
ATP5F1B ATP synthase F1 subunit beta 0.0309515
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.030857
PRKCI protein kinase C, iota 0.0305862
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0304236
RPS3 ribosomal protein S3 0.0300407
GASK1B golgi associated kinase 1B 0.029744
HDAC9 histone deacetylase 9 0.0295292
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0293101
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0287679
PRR16 proline rich 16 0.0283768
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0283494
DSPP dentin sialophosphoprotein 0.0282635
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0277979
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0276623
SNCA synuclein, alpha (non A4 component of amyloid precursor) 0.0276286
RNF213 ring finger protein 213 0.0270117
ARRDC3 arrestin domain containing 3 0.0269325
CDK19 cyclin-dependent kinase 19 0.0267545
OXR1 oxidation resistance 1 0.0267435
TBC1D5 TBC1 domain family, member 5 0.0267191
CLDND1 claudin domain containing 1 0.0264799
MPG N-methylpurine-DNA glycosylase 0.02602
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0256606
DSG2 desmoglein 2 0.025276
SACS sacsin molecular chaperone 0.0250801
FXR1 fragile X mental retardation, autosomal homolog 1 0.0249943
ADAR adenosine deaminase, RNA-specific 0.0245857
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0244637
ARL15 ADP-ribosylation factor-like 15 0.0243437
MAP4 microtubule-associated protein 4 0.0243247
TMEM106B transmembrane protein 106B 0.0242857
FER fer (fps/fes related) tyrosine kinase 0.0241586
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0240359
BABAM2 BRISC and BRCA1 A complex member 2 0.0235713
RPL7 ribosomal protein L7 0.0234343
NFE2L1 nuclear factor, erythroid 2-like 1 0.0233013
PCLO piccolo presynaptic cytomatrix protein 0.0232839
THSD7A thrombospondin, type I, domain containing 7A 0.023166
RPS29 ribosomal protein S29 0.0230797
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.0230452
ENO1 enolase 1, (alpha) 0.022905
SMYD3 SET and MYND domain containing 3 0.0228054
KDM3A lysine (K)-specific demethylase 3A 0.022738

decreased expression

Symbol Name Standardized Value
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.163858
PCDH7 protocadherin 7 -0.117357
AREG amphiregulin -0.116512
BIRC3 baculoviral IAP repeat containing 3 -0.115128
VIM vimentin -0.110087
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0980076
TMSB10 thymosin beta 10 -0.0942192
TMEM41B transmembrane protein 41B -0.0938076
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0824433
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0822973
EGR1 early growth response 1 -0.0819569
RAB7A RAB7A, member RAS oncogene family -0.0799369
NHSL1 NHS-like 1 -0.0737948
HMGA2 high mobility group AT-hook 2 -0.0655738
CCN2 cellular communication network factor 2 -0.0647191
YAP1 Yes-associated protein 1 -0.0642798
MMP12 matrix metallopeptidase 12 -0.0618207
ASPH aspartate beta-hydroxylase -0.0618136
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0616862
MYL12B myosin, light chain 12B, regulatory -0.0574392
SLC38A2 solute carrier family 38, member 2 -0.0549334
MARCHF4 membrane associated ring-CH-type finger 4 -0.0532781
ANKRD28 ankyrin repeat domain 28 -0.0502729
SLC38A1 solute carrier family 38, member 1 -0.0498012
EDARADD EDAR-associated death domain -0.0470961
JMJD1C jumonji domain containing 1C -0.0445619
SPRED2 sprouty-related, EVH1 domain containing 2 -0.043867
BCHE butyrylcholinesterase -0.0413373
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0411875
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0409051
ZNF804A zinc finger protein 804A -0.0397317
CDK17 cyclin-dependent kinase 17 -0.0388206
MTAP methylthioadenosine phosphorylase -0.0387131
CCND1 cyclin D1 -0.038659
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0380811
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0380308
SMC4 structural maintenance of chromosomes 4 -0.0373639
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0372861
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0369367
LOC102724023 ES1 protein homolog, mitochondrial -0.0364433
CELF2 CUGBP, Elav-like family member 2 -0.0363727
IPO7 importin 7 -0.0353595
ERRFI1 ERBB receptor feedback inhibitor 1 -0.034873
NAV3 neuron navigator 3 -0.0343341
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0340793
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0339178
ANKRD12 ankyrin repeat domain 12 -0.0339164
ETV5 ets variant 5 -0.0331192
CCNL1 cyclin L1 -0.0323775
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0320759
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0313536
PFN1 profilin 1 -0.0308707
TM4SF1 transmembrane 4 L six family member 1 -0.0308098
MKI67 marker of proliferation Ki-67 -0.0306407
CCT4 chaperonin containing TCP1, subunit 4 (delta) -0.0306226
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 -0.0305265
EDN1 endothelin 1 -0.0295454
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0291388
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0290785
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0288517
ADIPOR2 adiponectin receptor 2 -0.0285545
ANKRD17 ankyrin repeat domain 17 -0.0282898
TUBA1B tubulin, alpha 1b -0.0279352
OSBPL8 oxysterol binding protein-like 8 -0.027196
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0271095
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0270474
USP34 ubiquitin specific peptidase 34 -0.0269524
SETX senataxin -0.026762
ARL5B ADP-ribosylation factor-like 5B -0.0265699
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0263809
DUSP6 dual specificity phosphatase 6 -0.0262927
TMEM131 transmembrane protein 131 -0.0261361
YBX3 Y box binding protein 3 -0.0259171
VMP1 vacuole membrane protein 1 -0.0255136
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0252054
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0239348
RASAL2 RAS protein activator like 2 -0.0236486
HMGA1 high mobility group AT-hook 1 -0.0235308
NCEH1 neutral cholesterol ester hydrolase 1 -0.0234594
RRM2 ribonucleotide reductase M2 -0.0231495
NOP58 NOP58 ribonucleoprotein -0.022755
LMO7 LIM domain 7 -0.0226581
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) -0.0225888
WDR43 WD repeat domain 43 -0.0225445
PRIM2 primase, DNA, polypeptide 2 (58kDa) -0.0223718
NIPBL Nipped-B homolog (Drosophila) -0.0222109
MAP3K14 mitogen-activated protein kinase kinase kinase 14 -0.0220868
EML4 echinoderm microtubule associated protein like 4 -0.0216544
BIRC6 baculoviral IAP repeat containing 6 -0.0215766
RBM25 RNA binding motif protein 25 -0.0214342
ADGRG6 adhesion G protein-coupled receptor G6 -0.0214232
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0211819
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0208216
ATP11A ATPase, class VI, type 11A -0.0207469
ZNF638 zinc finger protein 638 -0.0207137
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0206049
KRR1 KRR1, small subunit (SSU) processome component, homolog (yeast) -0.0203346
EHBP1 EH domain binding protein 1 -0.0202361
KIF18B kinesin family member 18B -0.0198175
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.019438