Trametinib (DMSO_C-33 A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trametinib (DMSO perturbation in C-33 A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trametinib (DMSO_C-33 A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL5A2 collagen, type V, alpha 2 0.155719
SOX5 SRY (sex determining region Y)-box 5 0.133775
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.118859
TOX thymocyte selection-associated high mobility group box 0.118191
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.101898
CDH18 cadherin 18, type 2 0.0789884
ADGRG6 adhesion G protein-coupled receptor G6 0.0766226
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0702668
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D 0.0698489
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0571453
RAD51B RAD51 paralog B 0.0553354
CADM2 cell adhesion molecule 2 0.0496236
DST dystonin 0.0479799
GRID2 glutamate receptor, ionotropic, delta 2 0.0473689
CTNNA3 catenin (cadherin-associated protein), alpha 3 0.0424306
CCSER1 coiled-coil serine-rich protein 1 0.04236
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0396759
KMT2C lysine (K)-specific methyltransferase 2C 0.0385719
ANKRD12 ankyrin repeat domain 12 0.0380702
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0373545
CABIN1 calcineurin binding protein 1 0.0369776
SSBP2 single-stranded DNA binding protein 2 0.0357028
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0351821
KDM6A lysine (K)-specific demethylase 6A 0.0332096
EFNA5 ephrin-A5 0.0329709
HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 0.0324623
ZNF292 zinc finger protein 292 0.0311216
PRELID2 PRELI domain containing 2 0.0309528
ZBTB20 zinc finger and BTB domain containing 20 0.0308522
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0286792
KMT2E lysine (K)-specific methyltransferase 2E 0.0277745
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1 0.0270797
CTNNA2 catenin (cadherin-associated protein), alpha 2 0.0261645
AKAP9 A kinase (PRKA) anchor protein 9 0.0253703
MED13L mediator complex subunit 13-like 0.0251624
TBC1D5 TBC1 domain family, member 5 0.0232835
AGTPBP1 ATP/GTP binding protein 1 0.0231674
ATRN attractin 0.0230472
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0225322
ANKRD36 ankyrin repeat domain 36 0.0224018
EGLN1 egl-9 family hypoxia-inducible factor 1 0.0222651
SERTAD2 SERTA domain containing 2 0.0221097
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0217251
CALR calreticulin 0.021674
JMJD1C jumonji domain containing 1C 0.0216398
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0215825
FHIT fragile histidine triad 0.0214544
ANK2 ankyrin 2, neuronal 0.0204537
KDM4C lysine (K)-specific demethylase 4C 0.0202476
SCAPER S-phase cyclin A-associated protein in the ER 0.0196537
TBC1D22A TBC1 domain family, member 22A 0.0194544
BCAS3 breast carcinoma amplified sequence 3 0.0190042
CDK19 cyclin-dependent kinase 19 0.0188724
ASPH aspartate beta-hydroxylase 0.0186637
JUN jun proto-oncogene 0.0186372
RPL9 ribosomal protein L9 0.0183673
MON2 MON2 homolog (S. cerevisiae) 0.0181328
FNDC3B fibronectin type III domain containing 3B 0.0180523
ADAR adenosine deaminase, RNA-specific 0.0180085
KAT6B K(lysine) acetyltransferase 6B 0.0179427
PDE8A phosphodiesterase 8A 0.017834
PIAS2 protein inhibitor of activated STAT, 2 0.0178318
BNC2 basonuclin 2 0.0178146
SFPQ splicing factor proline/glutamine-rich 0.0176979
GYS1 glycogen synthase 1 (muscle) 0.0176803
ALKBH5 AlkB family member 5, RNA demethylase 0.0174096
ATG10 autophagy related 10 0.0169672
RNF150 ring finger protein 150 0.016884
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.0168268
PPP1R12B protein phosphatase 1, regulatory subunit 12B 0.0166497
ADAM9 ADAM metallopeptidase domain 9 0.0166132
PHF21A PHD finger protein 21A 0.0166037
SMAD4 SMAD family member 4 0.0165379
DSCAM Down syndrome cell adhesion molecule 0.0163242
NR1D2 nuclear receptor subfamily 1, group D, member 2 0.0161795
HELZ helicase with zinc finger 0.0159729
CEP250 centrosomal protein 250kDa 0.0159584
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0159309
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 0.0159069
NRG1 neuregulin 1 0.0157212
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.015715
INSIG2 insulin induced gene 2 0.0155836
CAMTA1 calmodulin binding transcription activator 1 0.0155564
ANXA2 annexin A2 0.0155428
SNCA synuclein, alpha (non A4 component of amyloid precursor) 0.0155126
AP1G1 adaptor-related protein complex 1, gamma 1 subunit 0.0154516
RTN4 reticulon 4 0.0154259
GAB2 GRB2-associated binding protein 2 0.0153701
ASCC3 activating signal cointegrator 1 complex subunit 3 0.015127
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0149604
COG6 component of oligomeric golgi complex 6 0.0148937
B2M beta-2-microglobulin 0.0146898
HILPDA hypoxia inducible lipid droplet-associated 0.0145891
UBE2H ubiquitin-conjugating enzyme E2H 0.0144375
FOSL2 FOS-like antigen 2 0.0143063
IGF2 insulin-like growth factor 2 0.0140465
RPL21 ribosomal protein L21 0.0140104
ARRDC3 arrestin domain containing 3 0.0140051
MLIP muscular LMNA-interacting protein 0.0138414
PCBP2 poly(rC) binding protein 2 0.0138303

decreased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.098204
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0640421
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0620196
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0578685
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0569784
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0551973
ACTG1 actin gamma 1 -0.0524108
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.051763
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0481039
RPS6 ribosomal protein S6 -0.047453
EGR1 early growth response 1 -0.0457382
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.045415
SOX4 SRY (sex determining region Y)-box 4 -0.0451244
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0437339
NEBL nebulette -0.043543
PTMA prothymosin, alpha -0.0433328
NF1 neurofibromin 1 -0.0433116
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0424352
HHIP hedgehog interacting protein -0.0412691
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0404642
RPS24 ribosomal protein S24 -0.0392989
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0387145
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0378129
LOC112694756 uncharaterized LOC112694756 -0.0368928
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0367821
SERBP1 SERPINE1 mRNA binding protein 1 -0.0366963
NPAS3 neuronal PAS domain protein 3 -0.0365777
LDHA lactate dehydrogenase A -0.0365353
ATP11A ATPase, class VI, type 11A -0.0362961
GNAS GNAS complex locus -0.0356814
DEK DEK proto-oncogene -0.0348998
NAP1L1 nucleosome assembly protein 1-like 1 -0.034143
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0327432
RPL28 ribosomal protein L28 -0.0326835
RPLP1 ribosomal protein, large, P1 -0.0324947
MAP3K14 mitogen-activated protein kinase kinase kinase 14 -0.0315278
RPL26 ribosomal protein L26 -0.0302934
VDAC1 voltage-dependent anion channel 1 -0.0297702
RPL32 ribosomal protein L32 -0.0292419
RPL12 ribosomal protein L12 -0.029224
MYL12B myosin, light chain 12B, regulatory -0.0291732
ANKRD17 ankyrin repeat domain 17 -0.0291
NCOR1 nuclear receptor corepressor 1 -0.0290483
MKI67 marker of proliferation Ki-67 -0.0287458
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0287314
IPO7 importin 7 -0.02831
ENAH enabled homolog (Drosophila) -0.0278927
PTPRG protein tyrosine phosphatase, receptor type, G -0.0271247
CELF2 CUGBP, Elav-like family member 2 -0.027069
RPL4 ribosomal protein L4 -0.0269573
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0265993
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0264741
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0262747
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0261736
MATR3 matrin 3 -0.0260575
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0258353
RPS4X ribosomal protein S4, X-linked -0.0256151
KDM3A lysine (K)-specific demethylase 3A -0.0255061
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0254263
RPS21 ribosomal protein S21 -0.0254098
RSL1D1 ribosomal L1 domain containing 1 -0.0247817
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0247375
RPLP0 ribosomal protein, large, P0 -0.0247029
MDN1 MDN1, midasin homolog (yeast) -0.0246213
ZNF217 zinc finger protein 217 -0.0244668
NASP nuclear autoantigenic sperm protein (histone-binding) -0.0243716
CRK v-crk avian sarcoma virus CT10 oncogene homolog -0.0243469
PRICKLE1 prickle homolog 1 (Drosophila) -0.0242921
TUBB tubulin, beta class I -0.0242039
RBM28 RNA binding motif protein 28 -0.0241795
TPD52 tumor protein D52 -0.0240834
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0240121
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0239624
RPL11 ribosomal protein L11 -0.02356
EIF5B eukaryotic translation initiation factor 5B -0.0233828
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0230192
ABI2 abl-interactor 2 -0.023007
HMGB1 high mobility group box 1 -0.0228579
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0222983
TMSB10 thymosin beta 10 -0.0221599
TMEM123 transmembrane protein 123 -0.0221339
BLTP2 bridge-like lipid transfer protein family member 2 -0.0219468
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0219447
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0219258
NOP58 NOP58 ribonucleoprotein -0.0218985
PFN1 profilin 1 -0.0218404
KTN1 kinectin 1 (kinesin receptor) -0.0216496
TTC17 tetratricopeptide repeat domain 17 -0.0215256
WLS wntless Wnt ligand secretion mediator -0.0213938
GJA1 gap junction protein, alpha 1, 43kDa -0.0213584
MIB1 mindbomb E3 ubiquitin protein ligase 1 -0.0213524
RACK1 receptor for activated C kinase 1 -0.0211302
HMGA1 high mobility group AT-hook 1 -0.0209063
HSPA8 heat shock 70kDa protein 8 -0.020897
RPL34 ribosomal protein L34 -0.0208833
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0208809
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 -0.0208626
CBX3 chromobox homolog 3 -0.0208556
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0208527
RAB7A RAB7A, member RAS oncogene family -0.0206428