Trametinib (DMSO_PANC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trametinib (DMSO perturbation in PANC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trametinib (DMSO_PANC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.124588
SOD2 superoxide dismutase 2, mitochondrial 0.109325
TRIO trio Rho guanine nucleotide exchange factor 0.0896448
TNS3 tensin 3 0.0653862
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0582211
MBNL2 muscleblind-like splicing regulator 2 0.052359
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0518072
SFTPA2 surfactant protein A2 0.0513817
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0509687
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0505153
ZCCHC7 zinc finger, CCHC domain containing 7 0.0497742
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.049121
SQSTM1 sequestosome 1 0.0471402
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 0.0452603
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0448805
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0441532
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0432562
SPAG9 sperm associated antigen 9 0.0405838
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.040568
FBL fibrillarin 0.0404973
FTL ferritin, light polypeptide 0.0396244
PCBP2 poly(rC) binding protein 2 0.0394087
ADM adrenomedullin 0.0376934
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0370842
RNF213 ring finger protein 213 0.0370015
MED13L mediator complex subunit 13-like 0.0369857
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0358837
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.035761
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0354377
FTH1 ferritin, heavy polypeptide 1 0.0341225
PICALM phosphatidylinositol binding clathrin assembly protein 0.0331127
TRA2A transformer 2 alpha homolog (Drosophila) 0.0319468
KMT2C lysine (K)-specific methyltransferase 2C 0.0317542
FLNB filamin B, beta 0.0313078
ELOVL5 ELOVL fatty acid elongase 5 0.0312815
ADAM17 ADAM metallopeptidase domain 17 0.0312425
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0311787
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0309994
LDHA lactate dehydrogenase A 0.0308725
MYH9 myosin, heavy chain 9, non-muscle 0.0308378
TSC22D2 TSC22 domain family, member 2 0.0303582
YBX1 Y box binding protein 1 0.0300508
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0299785
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0298549
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0297855
PARP14 poly (ADP-ribose) polymerase family, member 14 0.029477
FMNL2 formin-like 2 0.0293321
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0292695
CALR calreticulin 0.0290345
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0288021
KDM2A lysine (K)-specific demethylase 2A 0.0280701
PDIA3 protein disulfide isomerase family A, member 3 0.0279532
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0275919
ANXA2 annexin A2 0.0270485
BRD2 bromodomain containing 2 0.0269847
B2M beta-2-microglobulin 0.0269167
XPO1 exportin 1 0.0265123
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.026113
ATF6 activating transcription factor 6 0.0260118
RAB1A RAB1A, member RAS oncogene family 0.0259631
DPY19L1 dpy-19-like 1 (C. elegans) 0.0259354
LMNA lamin A/C 0.0257175
KDM6A lysine (K)-specific demethylase 6A 0.0255625
PLEC plectin 0.0254406
TMEM123 transmembrane protein 123 0.0253527
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0252371
KMT2A lysine (K)-specific methyltransferase 2A 0.0250414
ZFP36 ZFP36 ring finger protein 0.0249184
DST dystonin 0.0247555
SMAD3 SMAD family member 3 0.0244662
GOLGA4 golgin A4 0.0243721
BIRC6 baculoviral IAP repeat containing 6 0.0241392
KTN1 kinectin 1 (kinesin receptor) 0.0241357
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0240728
COL5A2 collagen, type V, alpha 2 0.0237264
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0236845
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.023552
EEF2 eukaryotic translation elongation factor 2 0.0235202
USP12 ubiquitin specific peptidase 12 0.0232989
DSCAM Down syndrome cell adhesion molecule 0.0231738
RLF rearranged L-myc fusion 0.0231679
JAK1 Janus kinase 1 0.0226203
TRPM7 transient receptor potential cation channel, subfamily M, member 7 0.022245
FXR1 fragile X mental retardation, autosomal homolog 1 0.0220166
PSMC4 proteasome (prosome, macropain) 26S subunit, ATPase, 4 0.0219806
TPD52 tumor protein D52 0.0218779
JUN jun proto-oncogene 0.0218448
NAMPT nicotinamide phosphoribosyltransferase 0.0216112
PUM1 pumilio RNA-binding family member 1 0.0214656
NCKAP1 NCK-associated protein 1 0.0213145
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0210459
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0210391
OGA O-GlcNAcase 0.0204122
DDIT4 DNA-damage-inducible transcript 4 0.0202188
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0201852
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0201545
SUCO SUN domain containing ossification factor 0.0200924
PUM2 pumilio RNA-binding family member 2 0.0200359
SIK3 SIK family kinase 3 0.0200074
CRABP2 cellular retinoic acid binding protein 2 0.019947

decreased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 -0.322355
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.142075
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.112184
TM4SF1 transmembrane 4 L six family member 1 -0.108412
THSD4 thrombospondin, type I, domain containing 4 -0.10539
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.103745
SLC35F3 solute carrier family 35, member F3 -0.102866
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0958838
CD44 CD44 molecule (Indian blood group) -0.0906528
VIM vimentin -0.0829989
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0818625
WWTR1 WW domain containing transcription regulator 1 -0.0813099
VCL vinculin -0.0792911
RPS16 ribosomal protein S16 -0.0677561
ASPH aspartate beta-hydroxylase -0.0658961
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0647345
HMGA2 high mobility group AT-hook 2 -0.063029
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0612295
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.059256
PLEKHG2 pleckstrin homology domain containing, family G (with RhoGef domain) member 2 -0.0578247
RTN4 reticulon 4 -0.0571052
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0547163
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0521352
NT5E 5'-nucleotidase, ecto (CD73) -0.0520901
MCL1 myeloid cell leukemia 1 -0.0515395
CDCP1 CUB domain containing protein 1 -0.0515114
NPAS2 neuronal PAS domain protein 2 -0.0513507
UBASH3B ubiquitin associated and SH3 domain containing B -0.0469296
ITGB5 integrin, beta 5 -0.0460251
CD59 CD59 molecule, complement regulatory protein -0.0456707
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 -0.04466
CARD18 caspase recruitment domain family, member 18 -0.0445229
ACTN4 actinin, alpha 4 -0.0445203
FHL2 four and a half LIM domains 2 -0.0438234
ATG7 autophagy related 7 -0.043505
EFNA5 ephrin-A5 -0.0430052
MT2A metallothionein 2A -0.0429403
SLC38A2 solute carrier family 38, member 2 -0.0426652
MACF1 microtubule-actin crosslinking factor 1 -0.0424388
ANKRD11 ankyrin repeat domain 11 -0.0412852
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0412009
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0407612
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0404347
ZNF780B zinc finger protein 780B -0.0390209
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 -0.0384998
FOSL1 FOS-like antigen 1 -0.0379014
DGKD diacylglycerol kinase, delta 130kDa -0.0373079
EGR1 early growth response 1 -0.036189
DDAH1 dimethylarginine dimethylaminohydrolase 1 -0.0357518
DNMBP dynamin binding protein -0.0341387
MCTP1 multiple C2 domains, transmembrane 1 -0.0333408
RAD51B RAD51 paralog B -0.0319451
ANGPTL4 angiopoietin-like 4 -0.0318373
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0308197
MAML3 mastermind-like 3 (Drosophila) -0.0299935
PDE10A phosphodiesterase 10A -0.0298934
BMAL2 basic helix-loop-helix ARNT like 2 -0.0294686
SMYD3 SET and MYND domain containing 3 -0.0293187
BMERB1 bMERB domain containing 1 -0.0292341
FAM3C family with sequence similarity 3, member C -0.0290858
TMSB10 thymosin beta 10 -0.0288844
NHSL1 NHS-like 1 -0.0286306
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0284967
ANTXR2 anthrax toxin receptor 2 -0.0284834
CENPF centromere protein F, 350/400kDa -0.0279103
SPRED1 sprouty-related, EVH1 domain containing 1 -0.0274184
VMP1 vacuole membrane protein 1 -0.0272175
NAV2 neuron navigator 2 -0.0269026
DOCK5 dedicator of cytokinesis 5 -0.0266791
RNF220 ring finger protein 220 -0.0265382
NF1 neurofibromin 1 -0.0262891
MKI67 marker of proliferation Ki-67 -0.0259255
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0250023
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0240483
F2RL1 coagulation factor II (thrombin) receptor-like 1 -0.023857
ZBTB20 zinc finger and BTB domain containing 20 -0.0237471
BCL2L1 BCL2-like 1 -0.0237332
SPRY4 sprouty homolog 4 (Drosophila) -0.0235784
ITPRID2 ITPR interacting domain containing 2 -0.0233983
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.0233586
SNX14 sorting nexin 14 -0.022965
ST3GAL3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 -0.022897
PRSS23 protease, serine, 23 -0.0225957
MOSMO modulator of smoothened -0.022516
AFAP1 actin filament associated protein 1 -0.0224091
CCND1 cyclin D1 -0.0223696
NABP1 nucleic acid binding protein 1 -0.0223363
PYGB phosphorylase, glycogen; brain -0.0222236
MAP1B microtubule-associated protein 1B -0.0221607
ABLIM3 actin binding LIM protein family, member 3 -0.0221515
MYO10 myosin X -0.0218444
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0215903
DIAPH2 diaphanous-related formin 2 -0.0209469
DHX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32 -0.0204919
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0204763
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0204695
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0204501
DCBLD1 discoidin, CUB and LCCL domain containing 1 -0.0203765
ELL2 elongation factor, RNA polymerase II, 2 -0.0203332
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.019951