Trametinib (DMSO_Panc 03.27 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trametinib (DMSO perturbation in Panc 03.27 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trametinib (DMSO_Panc 03.27 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EPS8 epidermal growth factor receptor pathway substrate 8 0.111847
DLG1 discs, large homolog 1 (Drosophila) 0.108271
PARP14 poly (ADP-ribose) polymerase family, member 14 0.105314
KRT17 keratin 17, type I 0.0989434
FNDC3B fibronectin type III domain containing 3B 0.0864758
RNF213 ring finger protein 213 0.0783498
ANLN anillin, actin binding protein 0.0676792
BIRC3 baculoviral IAP repeat containing 3 0.0663436
NAMPT nicotinamide phosphoribosyltransferase 0.0655616
ARRDC3 arrestin domain containing 3 0.0570686
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0565986
KDM6A lysine (K)-specific demethylase 6A 0.0550334
DSPP dentin sialophosphoprotein 0.0525732
EFNA5 ephrin-A5 0.0516441
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0515
XPO1 exportin 1 0.0512734
TNIP1 TNFAIP3 interacting protein 1 0.050885
MX1 MX dynamin-like GTPase 1 0.0501258
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0495658
OGA O-GlcNAcase 0.0493713
DSCAM Down syndrome cell adhesion molecule 0.0489416
TRIO trio Rho guanine nucleotide exchange factor 0.0482828
ZFAND3 zinc finger, AN1-type domain 3 0.0482495
RUNX1 runt-related transcription factor 1 0.0480406
DPYD dihydropyrimidine dehydrogenase 0.0468027
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0455168
SAMD12 sterile alpha motif domain containing 12 0.0453545
B2M beta-2-microglobulin 0.0452966
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0441436
CTNND1 catenin (cadherin-associated protein), delta 1 0.0437533
STK24 serine/threonine kinase 24 0.043615
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 0.043309
LYN LYN proto-oncogene, Src family tyrosine kinase 0.0428796
ETV6 ets variant 6 0.0425764
RBM39 RNA binding motif protein 39 0.0424345
ZNF292 zinc finger protein 292 0.0424343
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 0.0424277
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 0.0420674
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0420612
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0417178
HMGB2 high mobility group box 2 0.0403496
MYH9 myosin, heavy chain 9, non-muscle 0.0399384
FCHSD2 FCH and double SH3 domains 2 0.0396216
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0395669
GOLGA4 golgin A4 0.0395066
DST dystonin 0.0393484
BBX bobby sox homolog (Drosophila) 0.0392651
STAT1 signal transducer and activator of transcription 1, 91kDa 0.039146
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0391294
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0387662
CKAP5 cytoskeleton associated protein 5 0.0387523
WARS1 tryptophanyl-tRNA synthetase 1 0.0382836
KRT18 keratin 18, type I 0.0382598
CFB complement factor B 0.0378739
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0376698
CD47 CD47 molecule 0.0375873
NIPBL Nipped-B homolog (Drosophila) 0.0372907
CD2AP CD2-associated protein 0.0372019
USP9X ubiquitin specific peptidase 9, X-linked 0.0371392
NCKAP1 NCK-associated protein 1 0.0369855
PCBP2 poly(rC) binding protein 2 0.0367675
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.036629
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0363602
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0361891
ZNF148 zinc finger protein 148 0.0354588
WWC1 WW and C2 domain containing 1 0.0352677
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0351741
SMC4 structural maintenance of chromosomes 4 0.0349516
TFG TRK-fused gene 0.0349329
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0345253
ADAR adenosine deaminase, RNA-specific 0.0343935
ECT2 epithelial cell transforming 2 0.0343451
MAP3K1 mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase 0.033799
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0336395
ANXA1 annexin A1 0.0336116
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0335512
ZDHHC20 zinc finger, DHHC-type containing 20 0.0335098
MED13L mediator complex subunit 13-like 0.0334888
PTK2 protein tyrosine kinase 2 0.0334196
MUC4 mucin 4, cell surface associated 0.0327622
PCLO piccolo presynaptic cytomatrix protein 0.0324473
ADAM9 ADAM metallopeptidase domain 9 0.0323007
PABPC1 poly(A) binding protein, cytoplasmic 1 0.03217
IFI44 interferon-induced protein 44 0.0320169
SHROOM3 shroom family member 3 0.0318207
DENND4C DENN/MADD domain containing 4C 0.0318095
SPAG9 sperm associated antigen 9 0.031709
THBS1 thrombospondin 1 0.031638
NEK7 NIMA-related kinase 7 0.0314356
CANX calnexin 0.0313917
TMEM123 transmembrane protein 123 0.0313291
RABGAP1L RAB GTPase activating protein 1-like 0.0313127
PHF21A PHD finger protein 21A 0.0312827
EXT1 exostosin glycosyltransferase 1 0.0310384
APLP2 amyloid beta (A4) precursor-like protein 2 0.0309453
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 0.0308577
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0308044
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0307727
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0307655
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0306254

decreased expression

Symbol Name Standardized Value
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.178087
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.172677
LMO7 LIM domain 7 -0.15762
HMGA1 high mobility group AT-hook 1 -0.106933
LAMA4 laminin, alpha 4 -0.0927318
F3 coagulation factor III (thromboplastin, tissue factor) -0.089761
TMSB10 thymosin beta 10 -0.0875018
CD44 CD44 molecule (Indian blood group) -0.0791713
EMP1 epithelial membrane protein 1 -0.0774179
EGR1 early growth response 1 -0.0770717
LAMB3 laminin, beta 3 -0.0730923
INTS6 integrator complex subunit 6 -0.0723553
FN1 fibronectin 1 -0.0689945
LAMC2 laminin, gamma 2 -0.0620489
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0605603
NDRG1 N-myc downstream regulated 1 -0.0578239
ACTG1 actin gamma 1 -0.0577427
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0511563
CDCP1 CUB domain containing protein 1 -0.0507366
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0484737
SVIL supervillin -0.0478242
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0466613
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0441062
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0430251
CCND1 cyclin D1 -0.0408849
FOSL1 FOS-like antigen 1 -0.0403294
BACE2 beta-site APP-cleaving enzyme 2 -0.0396215
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0395507
HDAC9 histone deacetylase 9 -0.0395073
EGFR epidermal growth factor receptor -0.0392519
FTL ferritin, light polypeptide -0.0365313
SYT14 synaptotagmin XIV -0.0354414
IL1RAP interleukin 1 receptor accessory protein -0.0353809
PDLIM5 PDZ and LIM domain 5 -0.0352379
SYNGAP1 synaptic Ras GTPase activating protein 1 -0.0346059
HMGA2 high mobility group AT-hook 2 -0.03459
ARHGAP5 Rho GTPase activating protein 5 -0.0341069
SOX4 SRY (sex determining region Y)-box 4 -0.0339438
SH3KBP1 SH3-domain kinase binding protein 1 -0.0339123
THSD4 thrombospondin, type I, domain containing 4 -0.0333591
RAB7A RAB7A, member RAS oncogene family -0.0332662
ITGA6 integrin, alpha 6 -0.0323812
LOC102724023 ES1 protein homolog, mitochondrial -0.0323704
TPM4 tropomyosin 4 -0.0320509
AREG amphiregulin -0.0318978
MT2A metallothionein 2A -0.0305654
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0297024
RPS6 ribosomal protein S6 -0.0295186
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0292072
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0290344
LOC112694756 uncharaterized LOC112694756 -0.0287704
SLC35F3 solute carrier family 35, member F3 -0.0284828
DOCK9 dedicator of cytokinesis 9 -0.0283344
S100A6 S100 calcium binding protein A6 -0.0279355
PLSCR1 phospholipid scramblase 1 -0.0274502
SACK1A scaffolding CK1 anchoring protein A -0.0270363
CLDN4 claudin 4 -0.0268967
MYEOV myeloma overexpressed -0.0262793
AKAP12 A kinase (PRKA) anchor protein 12 -0.0261259
G0S2 G0/G1 switch 2 -0.0257055
EFNB2 ephrin-B2 -0.0255904
BCL2L1 BCL2-like 1 -0.0254396
TGM2 transglutaminase 2 -0.0249141
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 -0.0247687
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0246266
MELTF melanotransferrin -0.0246054
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 -0.0245666
MACF1 microtubule-actin crosslinking factor 1 -0.0244286
LIPH lipase, member H -0.0243802
GNAS GNAS complex locus -0.024365
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0239738
ARHGAP18 Rho GTPase activating protein 18 -0.0239314
FLNB filamin B, beta -0.0237405
BLZF1 basic leucine zipper nuclear factor 1 -0.0237145
MAML3 mastermind-like 3 (Drosophila) -0.023497
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0233091
TGFA transforming growth factor, alpha -0.0232576
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) -0.0231297
SOX9 SRY (sex determining region Y)-box 9 -0.0229213
BCAR3 breast cancer anti-estrogen resistance 3 -0.0229133
THRB thyroid hormone receptor, beta -0.0228053
POTEF POTE ankyrin domain family, member F -0.022326
ANXA2 annexin A2 -0.0221978
MPRIP myosin phosphatase Rho interacting protein -0.0220992
OSMR oncostatin M receptor -0.0220716
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0219668
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0218729
RPS5 ribosomal protein S5 -0.0218688
MAML2 mastermind-like 2 (Drosophila) -0.0217659
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0216791
RPL34 ribosomal protein L34 -0.021564
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0215375
AGO2 argonaute RISC catalytic component 2 -0.0211506
GATAD2A GATA zinc finger domain containing 2A -0.0209633
RASAL2 RAS protein activator like 2 -0.0208987
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0208077
CARD11 caspase recruitment domain family, member 11 -0.0208072
RPS20 ribosomal protein S20 -0.0207775
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0205278
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0201869