Trametinib_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trametinib perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trametinib_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MBNL2 muscleblind-like splicing regulator 2 0.0895
NDRG1 N-myc downstream regulated 1 0.0830339
MUC13 mucin 13, cell surface associated 0.0515849
GCLC glutamate-cysteine ligase, catalytic subunit 0.0465368
RNF213 ring finger protein 213 0.0460392
DSCAM Down syndrome cell adhesion molecule 0.0394731
OCLN occludin 0.0326652
EPS8 epidermal growth factor receptor pathway substrate 8 0.032434
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0312915
PDZD8 PDZ domain containing 8 0.0306008
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0302505
DST dystonin 0.0292204
ATP10B ATPase, class V, type 10B 0.0291534
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0231094
GBP2 guanylate binding protein 2, interferon-inducible 0.0227841
PHACTR4 phosphatase and actin regulator 4 0.0224247
KIF16B kinesin family member 16B 0.0217163
LURAP1L leucine rich adaptor protein 1-like 0.0215512
MLPH melanophilin 0.0213626
TRIM2 tripartite motif containing 2 0.0204633
MTUS1 microtubule associated tumor suppressor 1 0.0199767
HKDC1 hexokinase domain containing 1 0.0199289
NEBL nebulette 0.0199089
DPP4 dipeptidyl-peptidase 4 0.0196146
KLF5 Kruppel-like factor 5 (intestinal) 0.0192725
NPEPPS aminopeptidase puromycin sensitive 0.0185427
GOLGA2 golgin A2 0.0172554
SERINC5 serine incorporator 5 0.0169019
FHL2 four and a half LIM domains 2 0.016791
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0167401
TUFT1 tuftelin 1 0.0166781
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0163225
FRK fyn-related Src family tyrosine kinase 0.0162958
PHF3 PHD finger protein 3 0.0162203
GALNT15 polypeptide N-acetylgalactosaminyltransferase 15 0.0159131
CDHR2 cadherin-related family member 2 0.015772
MUC20 mucin 20, cell surface associated 0.0156937
EEF2 eukaryotic translation elongation factor 2 0.015584
MYO1E myosin IE 0.0154739
APOL2 apolipoprotein L, 2 0.0153639
TMC5 transmembrane channel-like 5 0.0149443
ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like 0.0146155
USP12 ubiquitin specific peptidase 12 0.0145755
CGN cingulin 0.0144737
MYO5B myosin VB 0.0141652
FNBP4 formin binding protein 4 0.0140588
CLOCK clock circadian regulator 0.0138732
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0138505
RPAIN RPA interacting protein 0.0138481
NFE2L1 nuclear factor, erythroid 2-like 1 0.0138023
DUSP10 dual specificity phosphatase 10 0.0137141
RAB6A RAB6A, member RAS oncogene family 0.0136597
RPL3 ribosomal protein L3 0.013469
JMY junction mediating and regulatory protein, p53 cofactor 0.0134044
VEGFA vascular endothelial growth factor A 0.0133487
TSPYL2 TSPY-like 2 0.0132937
UBL3 ubiquitin-like 3 0.0132698
HDLBP high density lipoprotein binding protein 0.0132608
TMEM51 transmembrane protein 51 0.0130755
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0128351
FNIP2 folliculin interacting protein 2 0.012715
TSPAN3 tetraspanin 3 0.0126831
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0125709
RBM47 RNA binding motif protein 47 0.0123767
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0122645
DAND5 DAN domain family member 5, BMP antagonist 0.0121953
AARS1 alanyl-tRNA synthetase 1 0.0121656
CDKN2A cyclin-dependent kinase inhibitor 2A 0.0121331
ERBB3 erb-b2 receptor tyrosine kinase 3 0.0118584
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0118042
SLC3A2 solute carrier family 3 (amino acid transporter heavy chain), member 2 0.01174
PIP5K1B phosphatidylinositol-4-phosphate 5-kinase, type I, beta 0.0116112
ATF3 activating transcription factor 3 0.0115375
GOLGA3 golgin A3 0.0114105
IGFBP3 insulin-like growth factor binding protein 3 0.0113051
BNIP5 BCL2 interacting protein 5 0.0112658
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor) 0.0112258
PNPLA7 patatin-like phospholipase domain containing 7 0.0111612
XPOT exportin, tRNA 0.0109277
TENT5A terminal nucleotidyltransferase 5A 0.0108476
ARFGAP1 ADP-ribosylation factor GTPase activating protein 1 0.0107649
GIGYF2 GRB10 interacting GYF protein 2 0.0106714
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0106688
RASSF6 Ras association (RalGDS/AF-6) domain family member 6 0.0105824
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 0.0105507
TRIM31 tripartite motif containing 31 0.0105159
MACC1 metastasis associated in colon cancer 1 0.0104063
CLCN3 chloride channel, voltage-sensitive 3 0.0103703
EXPH5 exophilin 5 0.0103546
UGDH UDP-glucose 6-dehydrogenase 0.0102734
CFB complement factor B 0.0100792
KAZN kazrin, periplakin interacting protein 0.0100611
CLIP1 CAP-GLY domain containing linker protein 1 0.0100479
CDK5RAP3 CDK5 regulatory subunit associated protein 3 0.00999561
MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 0.00994167
MYH9 myosin, heavy chain 9, non-muscle 0.00991161
RBM33 RNA binding motif protein 33 0.00982738
PALLD palladin, cytoskeletal associated protein 0.00980902
PPP1R3B protein phosphatase 1, regulatory subunit 3B 0.00974089
TMED2 transmembrane emp24 domain trafficking protein 2 0.00970129

decreased expression

Symbol Name Standardized Value
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.139735
EGR1 early growth response 1 -0.125772
ANXA2 annexin A2 -0.122563
GMDS GDP-mannose 4,6-dehydratase -0.11184
ITGA6 integrin, alpha 6 -0.0987334
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.090769
PRKCA protein kinase C, alpha -0.0893489
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0881007
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0878156
B2M beta-2-microglobulin -0.0871177
TPT1 tumor protein, translationally-controlled 1 -0.0834536
RUNX1 runt-related transcription factor 1 -0.0834045
LCN2 lipocalin 2 -0.0793518
ARHGAP26 Rho GTPase activating protein 26 -0.0788002
AREG amphiregulin -0.0759776
ZMYND8 zinc finger, MYND-type containing 8 -0.0759274
EFNB2 ephrin-B2 -0.0752906
PKM pyruvate kinase, muscle -0.0709122
ASPH aspartate beta-hydroxylase -0.0706778
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.069238
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0692002
PTMA prothymosin, alpha -0.0684016
PERP PERP, TP53 apoptosis effector -0.06834
EPSTI1 epithelial stromal interaction 1 (breast) -0.0656446
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 -0.0620013
INTS6 integrator complex subunit 6 -0.0598817
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0596043
LOC102724023 ES1 protein homolog, mitochondrial -0.0539796
MSI2 musashi RNA-binding protein 2 -0.0529723
RAB7A RAB7A, member RAS oncogene family -0.0523575
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0518279
C6ORF132 chromosome 6 open reading frame 132 -0.051077
MAML2 mastermind-like 2 (Drosophila) -0.0502864
STS steroid sulfatase (microsomal), isozyme S -0.0499053
LYZ lysozyme -0.048639
MEIS2 Meis homeobox 2 -0.0483845
EZR ezrin -0.0481506
ANKRD10 ankyrin repeat domain 10 -0.0478353
EPHB2 EPH receptor B2 -0.0474274
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0461321
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0455081
ABHD2 abhydrolase domain containing 2 -0.0453634
MAP7 microtubule-associated protein 7 -0.0446174
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.043399
LAMA4 laminin, alpha 4 -0.0431989
TXNIP thioredoxin interacting protein -0.0422143
SHB Src homology 2 domain containing adaptor protein B -0.0419022
IFI6 interferon, alpha-inducible protein 6 -0.0418573
ATP11A ATPase, class VI, type 11A -0.0416511
HLA-B major histocompatibility complex, class I, B -0.0415708
IFI27 interferon, alpha-inducible protein 27 -0.0405964
NF1 neurofibromin 1 -0.040455
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0402272
MCTP1 multiple C2 domains, transmembrane 1 -0.0401261
NCKAP5 NCK-associated protein 5 -0.0398778
SDC4 syndecan 4 -0.0398647
ABLIM1 actin binding LIM protein 1 -0.0394589
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0385843
PTBP3 polypyrimidine tract binding protein 3 -0.0372223
TMSB10 thymosin beta 10 -0.0368897
NPSR1 neuropeptide S receptor 1 -0.0365867
ERBIN erbb2 interacting protein -0.0359673
TRERF1 transcriptional regulating factor 1 -0.0358335
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.0357258
RHOBTB3 Rho-related BTB domain containing 3 -0.0352433
ENO1 enolase 1, (alpha) -0.0348961
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.034638
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0345762
S100A10 S100 calcium binding protein A10 -0.0343557
PLSCR1 phospholipid scramblase 1 -0.0343048
TM4SF19 transmembrane 4 L six family member 19 -0.0341133
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0338348
RIGI RNA sensor RIG-I -0.0337156
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0335079
SPRED1 sprouty-related, EVH1 domain containing 1 -0.0333296
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0324071
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0318969
MCL1 myeloid cell leukemia 1 -0.0317648
SP100 SP100 nuclear antigen -0.0317353
IRS2 insulin receptor substrate 2 -0.0315732
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0313531
PDIA3 protein disulfide isomerase family A, member 3 -0.0312161
VCL vinculin -0.0300832
S100A6 S100 calcium binding protein A6 -0.0300526
SMAD3 SMAD family member 3 -0.0300334
RPL35A ribosomal protein L35a -0.030023
TSHZ2 teashirt zinc finger homeobox 2 -0.0299193
POTEF POTE ankyrin domain family, member F -0.0297375
PTK2 protein tyrosine kinase 2 -0.0294996
TNS4 tensin 4 -0.0292953
SQSTM1 sequestosome 1 -0.0291534
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.028789
CCNL1 cyclin L1 -0.0286539
PATJ PATJ crumbs cell polarity complex component -0.0285883
SORBS1 sorbin and SH3 domain containing 1 -0.0282368
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0276798
FNDC3B fibronectin type III domain containing 3B -0.0268825
PARD3 par-3 family cell polarity regulator -0.0267972
SLC38A1 solute carrier family 38, member 1 -0.0267023
CD46 CD46 molecule, complement regulatory protein -0.0266003