Trametinib_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trametinib perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trametinib_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.188615
MUC13 mucin 13, cell surface associated 0.116289
MYO1E myosin IE 0.0850397
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.0689483
MYH14 myosin, heavy chain 14, non-muscle 0.0672048
EXT1 exostosin glycosyltransferase 1 0.0668344
MUC6 mucin 6, oligomeric mucus/gel-forming 0.0644311
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0571254
FOXP1 forkhead box P1 0.0552368
SHROOM3 shroom family member 3 0.0549576
CACNB2 calcium channel, voltage-dependent, beta 2 subunit 0.0518116
FTH1 ferritin, heavy polypeptide 1 0.0506396
ZBTB20 zinc finger and BTB domain containing 20 0.0484673
DSPP dentin sialophosphoprotein 0.0481005
PTEN phosphatase and tensin homolog 0.0450456
VEGFA vascular endothelial growth factor A 0.0445872
MYH9 myosin, heavy chain 9, non-muscle 0.0418101
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0416686
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0406826
NALF1 NALCN channel auxiliary factor 1 0.0389864
PARD3B par-3 family cell polarity regulator beta 0.0386277
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0386088
PRELID2 PRELI domain containing 2 0.0383004
RPL3 ribosomal protein L3 0.0379521
POF1B premature ovarian failure, 1B 0.037499
USP54 ubiquitin specific peptidase 54 0.0342383
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0339566
PELI1 pellino E3 ubiquitin protein ligase 1 0.0338137
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0336051
EEF2 eukaryotic translation elongation factor 2 0.0331111
ARHGAP42 Rho GTPase activating protein 42 0.032358
LURAP1L leucine rich adaptor protein 1-like 0.0316197
ATP10B ATPase, class V, type 10B 0.0314303
PDZD8 PDZ domain containing 8 0.0308707
NRXN3 neurexin 3 0.0297997
ARID5B AT rich interactive domain 5B (MRF1-like) 0.0296769
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0295587
PTPRR protein tyrosine phosphatase, receptor type, R 0.0290327
VCL vinculin 0.0278918
PIP5K1B phosphatidylinositol-4-phosphate 5-kinase, type I, beta 0.0277934
MUC17 mucin 17, cell surface associated 0.0269238
DUSP16 dual specificity phosphatase 16 0.0266534
INSIG1 insulin induced gene 1 0.0264914
ADD3 adducin 3 (gamma) 0.0258593
ACTG1 actin gamma 1 0.0256322
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0255014
RNF213 ring finger protein 213 0.0254092
PALLD palladin, cytoskeletal associated protein 0.0253832
ATXN1 ataxin 1 0.0253255
ATP8A1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 0.0252007
ANXA11 annexin A11 0.0251341
SH3RF2 SH3 domain containing ring finger 2 0.0248948
TACC2 transforming, acidic coiled-coil containing protein 2 0.0247708
MECOM MDS1 and EVI1 complex locus 0.024469
RAD51B RAD51 paralog B 0.0242938
STK38L serine/threonine kinase 38 like 0.0242316
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0240839
MYO5B myosin VB 0.023906
MACC1 metastasis associated in colon cancer 1 0.0230931
TMEM45B transmembrane protein 45B 0.0230118
ZNF91 zinc finger protein 91 0.0229098
ETV6 ets variant 6 0.022562
CCSER1 coiled-coil serine-rich protein 1 0.0223942
LOC102724023 ES1 protein homolog, mitochondrial 0.02227
CLOCK clock circadian regulator 0.0220686
ST14 suppression of tumorigenicity 14 (colon carcinoma) 0.0218576
TMPRSS2 transmembrane protease, serine 2 0.0216565
DNM2 dynamin 2 0.0215956
TRPS1 trichorhinophalangeal syndrome I 0.0215602
TSPAN8 tetraspanin 8 0.021427
VAV3 vav 3 guanine nucleotide exchange factor 0.0213067
FHL2 four and a half LIM domains 2 0.0211758
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.0209789
CSTPP1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 0.0206077
TNS3 tensin 3 0.0205397
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0190847
PCSK5 proprotein convertase subtilisin/kexin type 5 0.0188598
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0187978
SORBS1 sorbin and SH3 domain containing 1 0.0187656
ARHGEF10L Rho guanine nucleotide exchange factor (GEF) 10-like 0.0187132
CEMIP2 cell migration inducing hyaluronidase 2 0.0187032
CDK19 cyclin-dependent kinase 19 0.0186727
PRSS23 protease, serine, 23 0.0186442
SAMD4A sterile alpha motif domain containing 4A 0.0186379
SOX4 SRY (sex determining region Y)-box 4 0.0186157
JUN jun proto-oncogene 0.0184994
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0184939
DENND4C DENN/MADD domain containing 4C 0.0181846
CDH17 cadherin 17, LI cadherin (liver-intestine) 0.0181738
MYO1D myosin ID 0.0180752
PDXK pyridoxal (pyridoxine, vitamin B6) kinase 0.0177317
ZC3H12B zinc finger CCCH-type containing 12B 0.0177064
LRATD1 LRAT domain containing 1 0.0176734
CLIC5 chloride intracellular channel 5 0.0176494
PTPRB protein tyrosine phosphatase, receptor type, B 0.0174578
PLXNB2 plexin B2 0.0174254
UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6 0.0173432
ZFP36L2 ZFP36 ring finger protein-like 2 0.0171963
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide 0.0171572
PDLIM5 PDZ and LIM domain 5 0.0170591

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.23482
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.231282
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.139351
ANXA2 annexin A2 -0.13015
CEMIP cell migration inducing protein, hyaluronan binding -0.121214
TNS4 tensin 4 -0.100326
ANTXR2 anthrax toxin receptor 2 -0.0876199
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0777218
GMDS GDP-mannose 4,6-dehydratase -0.0745363
ASPH aspartate beta-hydroxylase -0.0735117
ONECUT3 one cut homeobox 3 -0.0718224
GOLGA4 golgin A4 -0.0670067
FLNB filamin B, beta -0.0660186
PTMA prothymosin, alpha -0.0623672
GREB1L growth regulation by estrogen in breast cancer-like -0.0616645
H1-0 H1.0 linker histone -0.0582461
CADPS Ca++-dependent secretion activator -0.0575337
CANX calnexin -0.0572588
KIF5B kinesin family member 5B -0.0568285
FAT1 FAT atypical cadherin 1 -0.0527235
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.05237
BIRC6 baculoviral IAP repeat containing 6 -0.0518669
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0483782
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0470151
KRT18 keratin 18, type I -0.0468156
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 -0.0467139
MED13L mediator complex subunit 13-like -0.0461506
TPT1 tumor protein, translationally-controlled 1 -0.0454105
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.044051
LMO7 LIM domain 7 -0.0431932
AGR2 anterior gradient 2 -0.0421001
FERMT1 fermitin family member 1 -0.0419237
IARS1 isoleucyl-tRNA synthetase 1 -0.0417262
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase -0.0416699
EIF1 eukaryotic translation initiation factor 1 -0.0409206
ARHGAP5 Rho GTPase activating protein 5 -0.0406414
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0393514
ZFAND3 zinc finger, AN1-type domain 3 -0.0389547
GPHN gephyrin -0.0385426
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0377105
TOP1 topoisomerase (DNA) I -0.0375697
TPM4 tropomyosin 4 -0.037491
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic) -0.037064
SEC31A SEC31 homolog A (S. cerevisiae) -0.0369512
SPRED1 sprouty-related, EVH1 domain containing 1 -0.0368111
GDF15 growth differentiation factor 15 -0.0367487
KDM3A lysine (K)-specific demethylase 3A -0.036732
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0362773
RBM39 RNA binding motif protein 39 -0.0361412
EHBP1 EH domain binding protein 1 -0.0355274
TMSB10 thymosin beta 10 -0.0354917
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) -0.0353327
RAB1A RAB1A, member RAS oncogene family -0.0351751
ITPRID2 ITPR interacting domain containing 2 -0.0350685
NFIA nuclear factor I/A -0.0350292
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.034952
FOXO1 forkhead box O1 -0.0344183
NCOR1 nuclear receptor corepressor 1 -0.0341022
RPS6 ribosomal protein S6 -0.0338357
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0338213
CCND1 cyclin D1 -0.0338087
GCC2 GRIP and coiled-coil domain containing 2 -0.0338079
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0336511
PDIA4 protein disulfide isomerase family A, member 4 -0.0335008
PGK1 phosphoglycerate kinase 1 -0.0334589
RNF145 ring finger protein 145 -0.0333106
ARF1 ADP-ribosylation factor 1 -0.0318099
RPLP1 ribosomal protein, large, P1 -0.0317241
GARS1 glycyl-tRNA synthetase 1 -0.031449
PDIA3 protein disulfide isomerase family A, member 3 -0.03133
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0308358
RAD21 RAD21 homolog (S. pombe) -0.0308197
SLC38A1 solute carrier family 38, member 1 -0.0307827
WDR45B WD repeat domain 45B -0.0306615
BZW1 basic leucine zipper and W2 domains 1 -0.0305064
SLC38A2 solute carrier family 38, member 2 -0.0303601
TANC1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 -0.0300947
RRBP1 ribosome binding protein 1 -0.0289618
ESYT2 extended synaptotagmin-like protein 2 -0.0287807
S100P S100 calcium binding protein P -0.0285474
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0285181
PKM pyruvate kinase, muscle -0.0285016
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0279893
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0276912
PPP2R5C protein phosphatase 2, regulatory subunit B', gamma -0.0276142
FNDC3B fibronectin type III domain containing 3B -0.027588
TTC3 tetratricopeptide repeat domain 3 -0.0275313
MON2 MON2 homolog (S. cerevisiae) -0.0272967
ARHGAP12 Rho GTPase activating protein 12 -0.0272279
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0272009
DSCAM Down syndrome cell adhesion molecule -0.0270627
NAP1L1 nucleosome assembly protein 1-like 1 -0.0270032
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0269269
SHB Src homology 2 domain containing adaptor protein B -0.0268083
SETD5 SET domain containing 5 -0.0268082
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0267763
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0267487
BACE2 beta-site APP-cleaving enzyme 2 -0.0266954
RREB1 ras responsive element binding protein 1 -0.0266318
OGA O-GlcNAcase -0.0265666