Trametinib_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trametinib perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trametinib_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.220797
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.192578
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.1276
RNF213 ring finger protein 213 0.110224
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.10116
LMO7 LIM domain 7 0.0990317
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0937273
IGFBP3 insulin-like growth factor binding protein 3 0.0907275
AKR1C1 aldo-keto reductase family 1, member C1 0.0765203
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0764967
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0758792
MYOF myoferlin 0.0719148
CAV1 caveolin 1, caveolae protein, 22kDa 0.069997
IGFBP5 insulin-like growth factor binding protein 5 0.0685401
LRP1B low density lipoprotein receptor-related protein 1B 0.066996
RAB27B RAB27B, member RAS oncogene family 0.0663727
GCLC glutamate-cysteine ligase, catalytic subunit 0.0638809
DSPP dentin sialophosphoprotein 0.053308
PDE4D phosphodiesterase 4D, cAMP-specific 0.0493494
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0468144
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0450606
B2M beta-2-microglobulin 0.0449325
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.0433332
ADAM9 ADAM metallopeptidase domain 9 0.0423352
CST3 cystatin C 0.0410279
KRT7 keratin 7, type II 0.0383623
NTN4 netrin 4 0.0373347
CTNND1 catenin (cadherin-associated protein), delta 1 0.036577
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38 0.0359852
CAV2 caveolin 2 0.0356753
LIMCH1 LIM and calponin homology domains 1 0.0346039
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 0.0344592
IFI6 interferon, alpha-inducible protein 6 0.0342022
TJP1 tight junction protein 1 0.0332858
LDHA lactate dehydrogenase A 0.0331442
CCSER1 coiled-coil serine-rich protein 1 0.0329817
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0324437
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0321233
PM20D1 peptidase M20 domain containing 1 0.0319313
ADGRF1 adhesion G protein-coupled receptor F1 0.0317589
OSMR oncostatin M receptor 0.0300628
MGAT4C MGAT4 family, member C 0.029711
CP ceruloplasmin (ferroxidase) 0.0287244
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0284241
ZMYND8 zinc finger, MYND-type containing 8 0.0283748
CPEB2 cytoplasmic polyadenylation element binding protein 2 0.0283242
FTH1 ferritin, heavy polypeptide 1 0.0276196
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0273414
RAB10 RAB10, member RAS oncogene family 0.0272529
PRDX1 peroxiredoxin 1 0.027026
MYO1B myosin IB 0.0270166
MGST1 microsomal glutathione S-transferase 1 0.0265126
GPAT3 glycerol-3-phosphate acyltransferase 3 0.0262617
SLC38A1 solute carrier family 38, member 1 0.0261186
TSC22D2 TSC22 domain family, member 2 0.0256091
PTEN phosphatase and tensin homolog 0.0255639
KIAA0319 KIAA0319 0.0254002
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0253883
KRT80 keratin 80, type II 0.0250767
CPE carboxypeptidase E 0.0249166
ALPK1 alpha-kinase 1 0.0248786
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0247959
TMSB10 thymosin beta 10 0.0247807
HACD2 3-hydroxyacyl-CoA dehydratase 2 0.024778
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0246693
JAK1 Janus kinase 1 0.0246268
TES testin LIM domain protein 0.0243469
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0242065
MACC1 metastasis associated in colon cancer 1 0.02368
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) 0.0234491
TAOK3 TAO kinase 3 0.0233969
SPTSSA serine palmitoyltransferase, small subunit A 0.0231164
ALCAM activated leukocyte cell adhesion molecule 0.0230893
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.0229928
STC2 stanniocalcin 2 0.0229204
DSCAM Down syndrome cell adhesion molecule 0.022596
AHR aryl hydrocarbon receptor 0.0225548
CLIP1 CAP-GLY domain containing linker protein 1 0.022338
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0220715
NCOA3 nuclear receptor coactivator 3 0.0220064
ST14 suppression of tumorigenicity 14 (colon carcinoma) 0.0218444
RBM47 RNA binding motif protein 47 0.0207776
PDE8A phosphodiesterase 8A 0.0204638
DAPP1 dual adaptor of phosphotyrosine and 3-phosphoinositides 0.0202043
RPL3 ribosomal protein L3 0.0200521
UGDH UDP-glucose 6-dehydrogenase 0.0197331
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0194676
JUP junction plakoglobin 0.0194408
POTEF POTE ankyrin domain family, member F 0.019365
RHOV ras homolog family member V 0.0190804
ACTG1 actin gamma 1 0.0190292
NEBL nebulette 0.0185013
ARRDC3 arrestin domain containing 3 0.0184697
CTSL cathepsin L 0.0182109
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0181754
TMOD3 tropomodulin 3 (ubiquitous) 0.0181497
CABLES1 Cdk5 and Abl enzyme substrate 1 0.0179288
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0179058
GABARAPL1 GABA(A) receptor-associated protein like 1 0.01759
LPGAT1 lysophosphatidylglycerol acyltransferase 1 0.0175898

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.127945
THSD4 thrombospondin, type I, domain containing 4 -0.126184
MT2A metallothionein 2A -0.119189
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.117146
EGFR epidermal growth factor receptor -0.114315
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.109174
PTPRM protein tyrosine phosphatase, receptor type, M -0.100298
MCTP1 multiple C2 domains, transmembrane 1 -0.0981451
AGO2 argonaute RISC catalytic component 2 -0.0920377
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0890183
SHANK2 SH3 and multiple ankyrin repeat domains 2 -0.0871124
MCL1 myeloid cell leukemia 1 -0.0853833
TOP1 topoisomerase (DNA) I -0.0816799
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0782151
SLTM SAFB-like, transcription modulator -0.0766386
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0755871
LAMC2 laminin, gamma 2 -0.0731014
TPT1 tumor protein, translationally-controlled 1 -0.071708
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0691984
NABP1 nucleic acid binding protein 1 -0.0659449
NPAS2 neuronal PAS domain protein 2 -0.0653616
INTS6 integrator complex subunit 6 -0.0622012
RPLP1 ribosomal protein, large, P1 -0.0579931
STC1 stanniocalcin 1 -0.0504679
SMAD3 SMAD family member 3 -0.0486453
RUNX1 runt-related transcription factor 1 -0.0478688
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0464422
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0464124
PTMA prothymosin, alpha -0.0459619
CANX calnexin -0.0456959
H1-0 H1.0 linker histone -0.0448963
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.044637
RAB7A RAB7A, member RAS oncogene family -0.0446032
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0438385
NAMPT nicotinamide phosphoribosyltransferase -0.0431678
PTPRJ protein tyrosine phosphatase, receptor type, J -0.0420593
TBC1D22A TBC1 domain family, member 22A -0.0412785
SOD2 superoxide dismutase 2, mitochondrial -0.0403956
EIF1 eukaryotic translation initiation factor 1 -0.039812
CDCP1 CUB domain containing protein 1 -0.0397055
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0383748
USP34 ubiquitin specific peptidase 34 -0.0378149
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0375952
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0367689
BZW1 basic leucine zipper and W2 domains 1 -0.0362515
RPLP0 ribosomal protein, large, P0 -0.0361852
MORF4L2 mortality factor 4 like 2 -0.0350087
EFNA5 ephrin-A5 -0.0349965
UVRAG UV radiation resistance associated -0.0349569
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0345124
RPS24 ribosomal protein S24 -0.0341455
CEMIP cell migration inducing protein, hyaluronan binding -0.0338075
RPS8 ribosomal protein S8 -0.0334725
RPL35A ribosomal protein L35a -0.0334424
GPATCH2L G patch domain containing 2-like -0.0329073
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0327823
SMYD3 SET and MYND domain containing 3 -0.032493
ASPH aspartate beta-hydroxylase -0.0323809
ZC3H11A zinc finger CCCH-type containing 11A -0.0320212
BTG1 B-cell translocation gene 1, anti-proliferative -0.0318675
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0317327
RPS6 ribosomal protein S6 -0.0315984
BLZF1 basic leucine zipper nuclear factor 1 -0.0312713
NIPBL Nipped-B homolog (Drosophila) -0.0312116
JMJD1C jumonji domain containing 1C -0.0311409
EGR1 early growth response 1 -0.031058
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0308448
IER3 immediate early response 3 -0.0307116
CD163L1 CD163 molecule-like 1 -0.0300864
RPS25 ribosomal protein S25 -0.030034
NTSR1 neurotensin receptor 1 (high affinity) -0.0296026
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0293358
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0293195
NF1 neurofibromin 1 -0.0293012
ATG7 autophagy related 7 -0.0287937
RPS3 ribosomal protein S3 -0.0286412
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0285568
ANKRD37 ankyrin repeat domain 37 -0.0284181
HOMER1 homer scaffolding protein 1 -0.0283646
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0278465
RNMT RNA (guanine-7-) methyltransferase -0.0277355
ATP13A3 ATPase type 13A3 -0.027436
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0273685
ENSA endosulfine alpha -0.0272891
FBXO11 F-box protein 11 -0.0271335
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0269576
ELL2 elongation factor, RNA polymerase II, 2 -0.0269377
TAS2R14 taste receptor, type 2, member 14 -0.0268307
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 -0.0262174
BACE2 beta-site APP-cleaving enzyme 2 -0.0261132
RASA2 RAS p21 protein activator 2 -0.026051
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0259603
RPL34 ribosomal protein L34 -0.0257201
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0255132
CCNL1 cyclin L1 -0.0255052
AHNAK AHNAK nucleoprotein -0.0254325
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0252891
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.025238
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0251368
SQSTM1 sequestosome 1 -0.0249975