Trametinib_NCI-H1792 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trametinib perturbation in NCI-H1792 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trametinib_NCI-H1792 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 0.0913305
AKAP12 A kinase (PRKA) anchor protein 12 0.0747879
TRIO trio Rho guanine nucleotide exchange factor 0.0464522
FBN1 fibrillin 1 0.0337538
DPYSL3 dihydropyrimidinase-like 3 0.0337474
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0313221
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0305982
FAM20C family with sequence similarity 20, member C 0.0304679
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0292718
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0277503
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0273579
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0267187
SOD2 superoxide dismutase 2, mitochondrial 0.0263308
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0259835
GBP2 guanylate binding protein 2, interferon-inducible 0.0227226
DCLK2 doublecortin-like kinase 2 0.0220083
HDAC9 histone deacetylase 9 0.0216121
SAMD4A sterile alpha motif domain containing 4A 0.0210489
GYS1 glycogen synthase 1 (muscle) 0.0205072
LOXL2 lysyl oxidase-like 2 0.0195597
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.0194499
MYH9 myosin, heavy chain 9, non-muscle 0.0191613
TGFBI transforming growth factor, beta-induced, 68kDa 0.0184162
RPL3 ribosomal protein L3 0.0179452
RNF213 ring finger protein 213 0.0178904
PELI1 pellino E3 ubiquitin protein ligase 1 0.0175574
TNFAIP2 tumor necrosis factor, alpha-induced protein 2 0.0173493
ANGPTL4 angiopoietin-like 4 0.0170637
B2M beta-2-microglobulin 0.0170134
PTPRR protein tyrosine phosphatase, receptor type, R 0.0169743
CEP250 centrosomal protein 250kDa 0.0169182
ADD3 adducin 3 (gamma) 0.0168013
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 0.0167692
IFI6 interferon, alpha-inducible protein 6 0.0166944
PNPT1 polyribonucleotide nucleotidyltransferase 1 0.0166778
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0164983
CNOT12 CCR4-NOT transcription complex subunit 12 0.0162614
PRKCSH protein kinase C substrate 80K-H 0.0154561
IFI44L interferon-induced protein 44-like 0.0152711
MYOF myoferlin 0.0150837
MX1 MX dynamin-like GTPase 1 0.0149783
SOX9 SRY (sex determining region Y)-box 9 0.0148087
AMPD3 adenosine monophosphate deaminase 3 0.014697
EFEMP1 EGF containing fibulin-like extracellular matrix protein 1 0.0144926
LIFR leukemia inhibitory factor receptor alpha 0.0141588
DIO2 deiodinase, iodothyronine, type II 0.013894
CFB complement factor B 0.0138897
PFKP phosphofructokinase, platelet 0.0137007
HELZ2 helicase with zinc finger 2, transcriptional coactivator 0.0135941
FLNA filamin A, alpha 0.013453
PTPRB protein tyrosine phosphatase, receptor type, B 0.0133654
FAM219A family with sequence similarity 219, member A 0.0130364
VEGFA vascular endothelial growth factor A 0.0128451
NFE2L1 nuclear factor, erythroid 2-like 1 0.0126697
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0126575
PLK2 polo-like kinase 2 0.0123795
MARS1 methionyl-tRNA synthetase 1 0.0122858
MLPH melanophilin 0.0121267
ANKRD36 ankyrin repeat domain 36 0.0119856
NAV2 neuron navigator 2 0.011981
SAMD9 sterile alpha motif domain containing 9 0.0119624
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 0.0119082
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0118214
PRELID2 PRELI domain containing 2 0.0117468
ADAM12 ADAM metallopeptidase domain 12 0.0117063
IFITM1 interferon induced transmembrane protein 1 0.0115146
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa 0.0114578
C1R complement component 1, r subcomponent 0.0113906
YEATS2 YEATS domain containing 2 0.0113613
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.0112883
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.011242
DSCAM Down syndrome cell adhesion molecule 0.0110743
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0110582
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0108895
MCC mutated in colorectal cancers 0.0108628
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0107791
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0107668
TGFB2 transforming growth factor, beta 2 0.0106365
MAFK v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K 0.0106286
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like 0.0105434
HMCN1 hemicentin 1 0.0104569
ADGRB3 adhesion G protein-coupled receptor B3 0.0103749
ADAR adenosine deaminase, RNA-specific 0.0103517
PTPRK protein tyrosine phosphatase, receptor type, K 0.010152
ZMIZ1 zinc finger, MIZ-type containing 1 0.0101451
OPTN optineurin 0.0099963
IFIH1 interferon induced with helicase C domain 1 0.00998295
NUMA1 nuclear mitotic apparatus protein 1 0.00997159
MRTFA myocardin related transcription factor A 0.00981277
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4 0.00979728
STXBP5 syntaxin binding protein 5 (tomosyn) 0.00972196
IL6R interleukin 6 receptor 0.00961128
UGT1A6 UDP glucuronosyltransferase 1 family, polypeptide A6 0.00959795
ARHGAP17 Rho GTPase activating protein 17 0.00952922
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.00949455
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.00941173
RBBP6 retinoblastoma binding protein 6 0.0094095
PARP9 poly (ADP-ribose) polymerase family, member 9 0.00939979
CADM1 cell adhesion molecule 1 0.00939002
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.00931305

decreased expression

Symbol Name Standardized Value
CD44 CD44 molecule (Indian blood group) -0.184723
NAMPT nicotinamide phosphoribosyltransferase -0.1512
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.135235
CXCL8 chemokine (C-X-C motif) ligand 8 -0.124049
EFNA5 ephrin-A5 -0.106892
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.104797
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.101881
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0975977
HMGA2 high mobility group AT-hook 2 -0.0947182
VIM vimentin -0.0934827
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0865869
STC1 stanniocalcin 1 -0.0794354
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0715408
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0688862
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0672742
CDH13 cadherin 13 -0.0661655
GLCCI1 glucocorticoid induced 1 -0.0656733
SIPA1L1 signal-induced proliferation-associated 1 like 1 -0.0651638
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0648407
GOLGA4 golgin A4 -0.0615032
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0583615
NRP1 neuropilin 1 -0.0580561
OSMR oncostatin M receptor -0.0565966
PDE4D phosphodiesterase 4D, cAMP-specific -0.055723
TMSB10 thymosin beta 10 -0.0534583
RBM39 RNA binding motif protein 39 -0.0533365
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0528417
CDCP1 CUB domain containing protein 1 -0.0522189
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0517463
FTL ferritin, light polypeptide -0.0511859
EGR1 early growth response 1 -0.051094
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0503226
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0479094
AKAP13 A kinase (PRKA) anchor protein 13 -0.0476828
ELL2 elongation factor, RNA polymerase II, 2 -0.0475268
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0475028
GRB10 growth factor receptor-bound protein 10 -0.0469033
ANTXR2 anthrax toxin receptor 2 -0.0465054
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.045828
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0442522
PDIA3 protein disulfide isomerase family A, member 3 -0.0442436
RAP1B RAP1B, member of RAS oncogene family -0.0435124
CAMK1D calcium/calmodulin-dependent protein kinase ID -0.0434493
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0433618
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0427853
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0426551
RAB27B RAB27B, member RAS oncogene family -0.0423817
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0413355
PTMA prothymosin, alpha -0.040949
PARP8 poly (ADP-ribose) polymerase family, member 8 -0.0401281
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0399853
KDM2A lysine (K)-specific demethylase 2A -0.0398101
HMGA1 high mobility group AT-hook 1 -0.0395095
LMAN1 lectin, mannose-binding, 1 -0.0383236
MSRB3 methionine sulfoxide reductase B3 -0.0376914
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0370022
NRG1 neuregulin 1 -0.0364184
IER3 immediate early response 3 -0.0361952
LOX lysyl oxidase -0.035804
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0354315
RIOK3 RIO kinase 3 -0.0352372
NPC1 Niemann-Pick disease, type C1 -0.0344254
KMT2E lysine (K)-specific methyltransferase 2E -0.0341579
SETD5 SET domain containing 5 -0.0339696
CANX calnexin -0.0339344
NPAS2 neuronal PAS domain protein 2 -0.0338407
JMJD1C jumonji domain containing 1C -0.0334594
ARHGAP5 Rho GTPase activating protein 5 -0.0331716
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0329287
PARD3 par-3 family cell polarity regulator -0.0325957
PCBP2 poly(rC) binding protein 2 -0.032539
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0323048
ZFAND3 zinc finger, AN1-type domain 3 -0.0321142
MAP1B microtubule-associated protein 1B -0.0318039
RPS6 ribosomal protein S6 -0.0316327
SYAP1 synapse associated protein 1 -0.0315353
TOP1 topoisomerase (DNA) I -0.0309398
ANXA2 annexin A2 -0.0308375
RPLP1 ribosomal protein, large, P1 -0.0308085
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0307396
USP3 ubiquitin specific peptidase 3 -0.0300342
RAB1A RAB1A, member RAS oncogene family -0.0296119
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0294765
RPL35A ribosomal protein L35a -0.0294183
PSD3 pleckstrin and Sec7 domain containing 3 -0.0292701
DDIT3 DNA-damage-inducible transcript 3 -0.0290909
ZC3H12C zinc finger CCCH-type containing 12C -0.028522
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0277902
OXSR1 oxidative stress responsive 1 -0.0276618
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0275387
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0274928
SPAG9 sperm associated antigen 9 -0.0269147
NF1 neurofibromin 1 -0.0269132
EIF1 eukaryotic translation initiation factor 1 -0.0264798
FTH1 ferritin, heavy polypeptide 1 -0.0264592
MEF2A myocyte enhancer factor 2A -0.0264523
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.0262838
FBXO11 F-box protein 11 -0.0261915
ECE1 endothelin converting enzyme 1 -0.0261347
USP34 ubiquitin specific peptidase 34 -0.0261022