Trametinib_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trametinib perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trametinib_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.106065
KYNU kynureninase 0.0901628
PDE4D phosphodiesterase 4D, cAMP-specific 0.0873013
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0666782
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0635403
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0606421
KRT17 keratin 17, type I 0.0603676
PLEC plectin 0.0594747
SAMD4A sterile alpha motif domain containing 4A 0.0593145
DSCAM Down syndrome cell adhesion molecule 0.0579584
MYH9 myosin, heavy chain 9, non-muscle 0.05469
PM20D1 peptidase M20 domain containing 1 0.0545743
MTUS1 microtubule associated tumor suppressor 1 0.0534177
PNISR PNN-interacting serine/arginine-rich protein 0.051135
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0499158
TJP1 tight junction protein 1 0.0471596
MYOF myoferlin 0.0469272
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0458713
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0446944
KATNBL1 katanin p80 subunit B-like 1 0.043717
TENM1 teneurin transmembrane protein 1 0.043277
PDE10A phosphodiesterase 10A 0.042411
CMIP c-Maf inducing protein 0.0420864
IRS2 insulin receptor substrate 2 0.0416066
DSPP dentin sialophosphoprotein 0.0405406
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0405336
NCKAP1 NCK-associated protein 1 0.0401615
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0389174
AKR1C2 aldo-keto reductase family 1, member C2 0.038585
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0379252
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0375684
NALF1 NALCN channel auxiliary factor 1 0.0370743
MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2) 0.0370109
HOOK2 hook microtubule-tethering protein 2 0.0357672
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0355456
DLGAP4 discs, large (Drosophila) homolog-associated protein 4 0.0355381
TRAM1 translocation associated membrane protein 1 0.035454
TULP4 tubby like protein 4 0.0352618
SON SON DNA binding protein 0.0351451
UBE2K ubiquitin-conjugating enzyme E2K 0.0348041
SRSF4 serine/arginine-rich splicing factor 4 0.0343418
FAM107B family with sequence similarity 107, member B 0.0340531
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0339882
FNDC3A fibronectin type III domain containing 3A 0.0337871
NEBL nebulette 0.0337612
RPL3 ribosomal protein L3 0.0336767
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0336676
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0334518
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0333068
COL1A1 collagen, type I, alpha 1 0.03319
EIF4B eukaryotic translation initiation factor 4B 0.0331033
SERINC5 serine incorporator 5 0.0328737
AGTPBP1 ATP/GTP binding protein 1 0.0328132
MBNL2 muscleblind-like splicing regulator 2 0.0327913
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0327857
NFE2L2 nuclear factor, erythroid 2-like 2 0.0323643
PMM2 phosphomannomutase 2 0.0321472
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0320372
ARHGAP42 Rho GTPase activating protein 42 0.0319392
TGFBI transforming growth factor, beta-induced, 68kDa 0.0319009
TENT5A terminal nucleotidyltransferase 5A 0.0318281
NFE2L1 nuclear factor, erythroid 2-like 1 0.031684
ATF4 activating transcription factor 4 0.0314682
INHBA inhibin, beta A 0.0310637
MCU mitochondrial calcium uniporter 0.0309363
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0307723
SEPTIN9 septin 9 0.0307524
HMBOX1 homeobox containing 1 0.0305762
CDK19 cyclin-dependent kinase 19 0.0304415
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0304242
TIMP3 TIMP metallopeptidase inhibitor 3 0.0302699
TENT2 terminal nucleotidyltransferase 2 0.0301117
SIK3 SIK family kinase 3 0.0300005
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 0.0297144
ISG15 ISG15 ubiquitin-like modifier 0.0296992
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 0.0296698
RPL13A ribosomal protein L13a 0.0296141
CAMKMT calmodulin-lysine N-methyltransferase 0.0295735
LIMCH1 LIM and calponin homology domains 1 0.0295163
HSPA8 heat shock 70kDa protein 8 0.0294522
USP47 ubiquitin specific peptidase 47 0.0293381
RPS8 ribosomal protein S8 0.0293198
EIF1 eukaryotic translation initiation factor 1 0.0291932
RPL4 ribosomal protein L4 0.0290775
BAZ1A bromodomain adjacent to zinc finger domain, 1A 0.0289855
EEF2 eukaryotic translation elongation factor 2 0.0287157
WNK1 WNK lysine deficient protein kinase 1 0.0285324
NKD1 naked cuticle homolog 1 (Drosophila) 0.0285278
CUL4A cullin 4A 0.028495
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0283712
GOLGA4 golgin A4 0.0283438
LCOR ligand dependent nuclear receptor corepressor 0.0282966
OSBPL8 oxysterol binding protein-like 8 0.0282297
MACC1 metastasis associated in colon cancer 1 0.0282131
APLP2 amyloid beta (A4) precursor-like protein 2 0.0279468
ERLEC1 endoplasmic reticulum lectin 1 0.0278798
PRPF8 pre-mRNA processing factor 8 0.0277696
SOS1 son of sevenless homolog 1 (Drosophila) 0.027565
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast) 0.0273701
CARS1 cysteinyl-tRNA synthetase 1 0.026833

decreased expression

Symbol Name Standardized Value
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.163548
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.155702
MYO1E myosin IE -0.118067
VIM vimentin -0.0869073
GRB10 growth factor receptor-bound protein 10 -0.0843759
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.081476
BACE2 beta-site APP-cleaving enzyme 2 -0.078761
FTL ferritin, light polypeptide -0.0750269
TMSB10 thymosin beta 10 -0.0746342
CEMIP cell migration inducing protein, hyaluronan binding -0.067643
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0662047
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0635217
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.061294
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0587514
EXT1 exostosin glycosyltransferase 1 -0.0571008
PTMA prothymosin, alpha -0.0566074
SNX9 sorting nexin 9 -0.056453
PELI1 pellino E3 ubiquitin protein ligase 1 -0.0563723
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0559477
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.055695
NDRG1 N-myc downstream regulated 1 -0.0545155
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0543246
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0529125
SRPK2 SRSF protein kinase 2 -0.0521756
KMT2C lysine (K)-specific methyltransferase 2C -0.0518188
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.05143
PTPRM protein tyrosine phosphatase, receptor type, M -0.0499347
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0497513
ERBIN erbb2 interacting protein -0.0497349
GPC6 glypican 6 -0.0494103
IGF1R insulin-like growth factor 1 receptor -0.0486052
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0482848
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.047836
RPS6 ribosomal protein S6 -0.0473117
MYO5B myosin VB -0.0450381
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0446749
AKAP12 A kinase (PRKA) anchor protein 12 -0.0445524
RAB1A RAB1A, member RAS oncogene family -0.0429726
TOP1 topoisomerase (DNA) I -0.0427938
MT2A metallothionein 2A -0.0426224
MAST4 microtubule associated serine/threonine kinase family member 4 -0.0425304
EGR1 early growth response 1 -0.041884
ACTG1 actin gamma 1 -0.0417386
RAB8B RAB8B, member RAS oncogene family -0.0415332
PLAUR plasminogen activator, urokinase receptor -0.0414786
ATP11B ATPase, class VI, type 11B -0.0400893
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0395856
RCOR1 REST corepressor 1 -0.0394367
EPS8 epidermal growth factor receptor pathway substrate 8 -0.039419
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0392733
PGK1 phosphoglycerate kinase 1 -0.0389813
ANTXR2 anthrax toxin receptor 2 -0.0389782
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 -0.0388385
BTG1 B-cell translocation gene 1, anti-proliferative -0.0380627
KDM5B lysine (K)-specific demethylase 5B -0.0376724
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0375858
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0375651
SH3KBP1 SH3-domain kinase binding protein 1 -0.0373092
FOXO3 forkhead box O3 -0.0357641
SPAG9 sperm associated antigen 9 -0.035618
NAMPT nicotinamide phosphoribosyltransferase -0.0351851
FBXO11 F-box protein 11 -0.0347561
RUNX1 runt-related transcription factor 1 -0.0345406
IFIH1 interferon induced with helicase C domain 1 -0.0343427
DLG1 discs, large homolog 1 (Drosophila) -0.0339866
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0339443
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0337333
FTH1 ferritin, heavy polypeptide 1 -0.0337199
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0333795
RPL11 ribosomal protein L11 -0.0331269
RNF145 ring finger protein 145 -0.0328313
BZW1 basic leucine zipper and W2 domains 1 -0.0328252
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0327126
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0327079
HMGA1 high mobility group AT-hook 1 -0.0323099
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0322685
STC1 stanniocalcin 1 -0.0320833
ZNF292 zinc finger protein 292 -0.0318415
FMN1 formin 1 -0.0316655
NPTN neuroplastin -0.0311214
CDCP1 CUB domain containing protein 1 -0.0307604
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0306777
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0305628
NHSL1 NHS-like 1 -0.030437
SVIL supervillin -0.0303561
MED13L mediator complex subunit 13-like -0.0298438
JMJD1C jumonji domain containing 1C -0.0297757
YAP1 Yes-associated protein 1 -0.0296894
ARHGAP12 Rho GTPase activating protein 12 -0.0295508
WASL Wiskott-Aldrich syndrome-like -0.0293949
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.029216
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0289349
ASPH aspartate beta-hydroxylase -0.028849
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0287328
RNF24 ring finger protein 24 -0.0287213
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0285511
KDM7A lysine (K)-specific demethylase 7A -0.0285452
FAM13A family with sequence similarity 13, member A -0.0285439
HBP1 HMG-box transcription factor 1 -0.0284889
ZFAND3 zinc finger, AN1-type domain 3 -0.0284872