Tranilast_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tranilast perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tranilast_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MUC6 mucin 6, oligomeric mucus/gel-forming 0.0405945
VCL vinculin 0.0283355
FTH1 ferritin, heavy polypeptide 1 0.0133321
GOLGB1 golgin B1 0.0130905
MYO1E myosin IE 0.0129656
RPL3 ribosomal protein L3 0.0129141
PDLIM5 PDZ and LIM domain 5 0.0115644
N4BP2L2 NEDD4 binding protein 2-like 2 0.0112362
CATSPERB catsper channel auxiliary subunit beta 0.0111983
LAMA4 laminin, alpha 4 0.0106423
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.00936257
MUC13 mucin 13, cell surface associated 0.00897801
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough 0.0087677
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.00839104
VEGFA vascular endothelial growth factor A 0.00827565
APLP2 amyloid beta (A4) precursor-like protein 2 0.00801587
MARCHF3 membrane associated ring-CH-type finger 3 0.00768592
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.00765984
INTS6 integrator complex subunit 6 0.0074949
MCL1 myeloid cell leukemia 1 0.00744581
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) 0.00739214
NABP1 nucleic acid binding protein 1 0.00711076
MUC3B mucin 3B, cell surface associated 0.00697815
EGR1 early growth response 1 0.00696511
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38 0.00685444
AREG amphiregulin 0.00668527
LRATD1 LRAT domain containing 1 0.00664224
EXT1 exostosin glycosyltransferase 1 0.00657632
ZFP36L1 ZFP36 ring finger protein-like 1 0.00650468
C6ORF62 chromosome 6 open reading frame 62 0.00642105
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0062774
PFKL phosphofructokinase, liver 0.00613283
PALLD palladin, cytoskeletal associated protein 0.00603654
POTEF POTE ankyrin domain family, member F 0.00589172
PRR5L proline rich 5 like 0.00575853
PTPRB protein tyrosine phosphatase, receptor type, B 0.00570597
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 0.00567858
CFAP44 cilia and flagella associated protein 44 0.00562774
TMF1 TATA element modulatory factor 1 0.00555993
PCNX4 pecanex 4 0.00551488
EIF5 eukaryotic translation initiation factor 5 0.00550241
HBEGF heparin-binding EGF-like growth factor 0.00546462
B4GALNT3 beta-1,4-N-acetyl-galactosaminyl transferase 3 0.00542712
SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 0.00535636
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.00529422
ZFP36 ZFP36 ring finger protein 0.00524579
SETX senataxin 0.00513693
ZSWIM6 zinc finger, SWIM-type containing 6 0.00511531
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.00508197
LYST lysosomal trafficking regulator 0.00496843
WNT2B wingless-type MMTV integration site family, member 2B 0.00496117
FBXW10B F-box and WD repeat domain containing 10B 0.00495718
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.004938
LURAP1L leucine rich adaptor protein 1-like 0.00491731
DSTN destrin (actin depolymerizing factor) 0.00491444
RIGI RNA sensor RIG-I 0.00487074
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.00483077
HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 0.00481562
ANXA3 annexin A3 0.00472828
HDGF hepatoma-derived growth factor 0.00465775
EPC2 enhancer of polycomb homolog 2 (Drosophila) 0.00463419
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.00458611
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.00455156
IFI44 interferon-induced protein 44 0.00454753
ZNF75D zinc finger protein 75D 0.00451137
SETD1B SET domain containing 1B 0.00450459
RPL21 ribosomal protein L21 0.00449394
STAU2 staufen double-stranded RNA binding protein 2 0.00449351
ERN1 endoplasmic reticulum to nucleus signaling 1 0.00448313
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.00446347
BAG6 BCL2-associated athanogene 6 0.00442794
PCF11 PCF11 cleavage and polyadenylation factor subunit 0.00442008
HNF4G hepatocyte nuclear factor 4, gamma 0.00438127
SEC16A SEC16 homolog A (S. cerevisiae) 0.00436805
MSN moesin 0.00434645
UBAP2 ubiquitin associated protein 2 0.00434345
BCL9L B-cell CLL/lymphoma 9-like 0.00434075
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.00434029
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1) 0.00431053
PHC2 polyhomeotic homolog 2 (Drosophila) 0.00430524
SRSF4 serine/arginine-rich splicing factor 4 0.00427912
MBD6 methyl-CpG binding domain protein 6 0.00427615
KIAA2026 KIAA2026 0.00426075
CHMP4C charged multivesicular body protein 4C 0.00424026
CDK2AP2 cyclin-dependent kinase 2 associated protein 2 0.00420256
CFAP161 cilia and flagella associated protein 161 0.00420255
SNX3 sorting nexin 3 0.00420125
GTPBP1 GTP binding protein 1 0.00419028
BET1 Bet1 golgi vesicular membrane trafficking protein 0.00418834
CYTH2 cytohesin 2 0.00416273
RAB8A RAB8A, member RAS oncogene family 0.00413719
BCL3 B-cell CLL/lymphoma 3 0.00413401
GLRX glutaredoxin (thioltransferase) 0.00411698
SRSF11 serine/arginine-rich splicing factor 11 0.00408998
KMT2D lysine (K)-specific methyltransferase 2D 0.00408082
TLNRD1 talin rod domain containing 1 0.00407974
IFI27 interferon, alpha-inducible protein 27 0.00407695
TOB1 transducer of ERBB2, 1 0.00407082
ZNF432 zinc finger protein 432 0.00405514
PPP1R13L protein phosphatase 1, regulatory subunit 13 like 0.00405149

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.134277
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0864104
TMSB10 thymosin beta 10 -0.0850165
TPT1 tumor protein, translationally-controlled 1 -0.0836942
PTMA prothymosin, alpha -0.0654583
PGK1 phosphoglycerate kinase 1 -0.0571409
ANXA2 annexin A2 -0.0544826
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0483011
ITGA6 integrin, alpha 6 -0.0478327
ZFAND3 zinc finger, AN1-type domain 3 -0.0452307
MED13L mediator complex subunit 13-like -0.0441296
KDM3A lysine (K)-specific demethylase 3A -0.0425453
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0412848
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0405948
EREG epiregulin -0.0404522
AHNAK AHNAK nucleoprotein -0.0397435
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 -0.039716
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0394466
EZR ezrin -0.0389733
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0387762
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0375943
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0358717
RAB1A RAB1A, member RAS oncogene family -0.0358682
RPS6 ribosomal protein S6 -0.0357746
FNBP1L formin binding protein 1-like -0.0356505
GPHN gephyrin -0.0356285
RPLP1 ribosomal protein, large, P1 -0.03557
FAM13A family with sequence similarity 13, member A -0.0355394
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0351512
RPL35A ribosomal protein L35a -0.0347157
LDHA lactate dehydrogenase A -0.0345647
ZNF292 zinc finger protein 292 -0.0345556
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0340341
KRT18 keratin 18, type I -0.0338927
RPS24 ribosomal protein S24 -0.0337912
RBM39 RNA binding motif protein 39 -0.0336016
PPARG peroxisome proliferator-activated receptor gamma -0.0335973
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0332932
LOC112694756 uncharaterized LOC112694756 -0.032544
FLNB filamin B, beta -0.0324155
NDRG1 N-myc downstream regulated 1 -0.0318487
WAC WW domain containing adaptor with coiled-coil -0.0317398
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0312814
PUM1 pumilio RNA-binding family member 1 -0.0310572
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0310068
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0302085
MARCHF6 membrane associated ring-CH-type finger 6 -0.0300345
PIGR polymeric immunoglobulin receptor -0.0298077
LMO7 LIM domain 7 -0.0296723
CEMIP cell migration inducing protein, hyaluronan binding -0.0294672
NPSR1 neuropeptide S receptor 1 -0.0293372
FNDC3B fibronectin type III domain containing 3B -0.0292152
PARD3 par-3 family cell polarity regulator -0.0282236
CD2AP CD2-associated protein -0.0279293
CANX calnexin -0.0278916
RNF145 ring finger protein 145 -0.0272905
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0270388
MED13 mediator complex subunit 13 -0.0268894
SERINC5 serine incorporator 5 -0.0267569
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0267381
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0266253
ANKRD11 ankyrin repeat domain 11 -0.0263177
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0262688
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0260598
KMT2E lysine (K)-specific methyltransferase 2E -0.0260101
FTL ferritin, light polypeptide -0.0258433
OGA O-GlcNAcase -0.0258352
HDLBP high density lipoprotein binding protein -0.0252514
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0251332
TFG TRK-fused gene -0.0251199
NF1 neurofibromin 1 -0.0251021
GNAQ guanine nucleotide binding protein (G protein), q polypeptide -0.0250827
NALF1 NALCN channel auxiliary factor 1 -0.024973
RREB1 ras responsive element binding protein 1 -0.0248007
BIRC6 baculoviral IAP repeat containing 6 -0.0247991
USP3 ubiquitin specific peptidase 3 -0.024714
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0246594
ACTG1 actin gamma 1 -0.0245729
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0244261
GMDS GDP-mannose 4,6-dehydratase -0.0240439
UBE2H ubiquitin-conjugating enzyme E2H -0.0238609
PUM2 pumilio RNA-binding family member 2 -0.02382
ONECUT3 one cut homeobox 3 -0.0238179
NCOR1 nuclear receptor corepressor 1 -0.0237275
ACTN4 actinin, alpha 4 -0.0236131
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0234145
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.0233812
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0233584
ESYT2 extended synaptotagmin-like protein 2 -0.0233172
RPL34 ribosomal protein L34 -0.0232611
JMJD1C jumonji domain containing 1C -0.0230731
CCNY cyclin Y -0.0230042
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0228133
S100A6 S100 calcium binding protein A6 -0.022418
TM9SF3 transmembrane 9 superfamily member 3 -0.0223706
RLF rearranged L-myc fusion -0.022269
MBNL2 muscleblind-like splicing regulator 2 -0.0221838
ALCAM activated leukocyte cell adhesion molecule -0.0221187
RPLP0 ribosomal protein, large, P0 -0.0218632
LPP LIM domain containing preferred translocation partner in lipoma -0.0218108