Tranilast_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tranilast perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tranilast_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RPS4Y1 ribosomal protein S4, Y-linked 1 0.041608
THBS1 thrombospondin 1 0.0300408
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0275453
PTK2 protein tyrosine kinase 2 0.0251298
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0225618
DENND4A DENN/MADD domain containing 4A 0.021939
NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit 0.0215173
HSPA8 heat shock 70kDa protein 8 0.019263
TFRC transferrin receptor 0.0190898
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0188057
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0187366
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0186129
HNRNPL heterogeneous nuclear ribonucleoprotein L 0.0185825
BRD2 bromodomain containing 2 0.0174754
OSBPL9 oxysterol binding protein-like 9 0.0170655
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0168321
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0166722
ETV3 ets variant 3 0.0164031
CYRIB CYFIP related Rac1 interactor B 0.0163346
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0160922
USP15 ubiquitin specific peptidase 15 0.0160171
NUP93 nucleoporin 93kDa 0.0158939
EIF1 eukaryotic translation initiation factor 1 0.0157129
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0153167
NEK7 NIMA-related kinase 7 0.0152032
SIK3 SIK family kinase 3 0.0150579
SCFD1 sec1 family domain containing 1 0.0149333
EIF4A3 eukaryotic translation initiation factor 4A3 0.0148822
ELOVL5 ELOVL fatty acid elongase 5 0.0145582
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0144149
FLNB filamin B, beta 0.0141419
PTGES2 prostaglandin E synthase 2 0.0139812
PUM1 pumilio RNA-binding family member 1 0.0138186
NXF1 nuclear RNA export factor 1 0.0137767
NUDT21 nudix (nucleoside diphosphate linked moiety X)-type motif 21 0.0137669
SOD2 superoxide dismutase 2, mitochondrial 0.0135556
ELOA elongin A 0.0135309
ZFAT zinc finger and AT hook domain containing 0.0135159
EXT1 exostosin glycosyltransferase 1 0.0134607
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0133995
AMFR autocrine motility factor receptor, E3 ubiquitin protein ligase 0.012951
RPS7 ribosomal protein S7 0.0129362
SMAD2 SMAD family member 2 0.0129321
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0129014
DHX38 DEAH (Asp-Glu-Ala-His) box polypeptide 38 0.012767
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0127408
RPRD1B regulation of nuclear pre-mRNA domain containing 1B 0.0126939
ARF4 ADP-ribosylation factor 4 0.0126229
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 0.0126034
P4HB prolyl 4-hydroxylase, beta polypeptide 0.012549
GRB10 growth factor receptor-bound protein 10 0.0124687
MAPK8 mitogen-activated protein kinase 8 0.0123909
MYO1B myosin IB 0.0123662
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0123386
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0123066
DSCAM Down syndrome cell adhesion molecule 0.0121759
RPL3 ribosomal protein L3 0.0120351
UIMC1 ubiquitin interaction motif containing 1 0.012032
TPD52 tumor protein D52 0.0118688
CDC50A cell division cycle 50 P4-ATPase accessory subunit A 0.0117459
FLNA filamin A, alpha 0.0117276
GRB14 growth factor receptor-bound protein 14 0.0116308
CAB39 calcium binding protein 39 0.0115604
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0115203
BCAR3 breast cancer anti-estrogen resistance 3 0.0115096
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.0112173
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0111798
KPNA1 karyopherin alpha 1 (importin alpha 5) 0.0110014
KANK1 KN motif and ankyrin repeat domains 1 0.0109713
CHN1 chimerin 1 0.0109133
SAR1A secretion associated, Ras related GTPase 1A 0.0108496
CTNNBL1 catenin, beta like 1 0.0108309
IGF2R insulin-like growth factor 2 receptor 0.0107606
ZNF335 zinc finger protein 335 0.0107202
SRSF4 serine/arginine-rich splicing factor 4 0.010632
AGO3 argonaute RISC catalytic component 3 0.0105337
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0104922
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0104837
BMPR1B bone morphogenetic protein receptor, type IB 0.0104647
AUH AU RNA binding protein/enoyl-CoA hydratase 0.0104352
RPL34 ribosomal protein L34 0.010363
KAT6B K(lysine) acetyltransferase 6B 0.0103202
MTMR3 myotubularin related protein 3 0.0102234
GPATCH8 G patch domain containing 8 0.0102182
RPL32 ribosomal protein L32 0.0102109
BLZF1 basic leucine zipper nuclear factor 1 0.0101836
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0101087
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0101057
COBLL1 cordon-bleu WH2 repeat protein-like 1 0.0100937
SMG7 SMG7 nonsense mediated mRNA decay factor 0.010083
CASC3 cancer susceptibility candidate 3 0.0100427
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.00997235
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.00993637
ATP6V1A ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A 0.00993292
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.00992107
SGMS1 sphingomyelin synthase 1 0.00989024
PDIA4 protein disulfide isomerase family A, member 4 0.00988886
CKAP5 cytoskeleton associated protein 5 0.00983814
RPS10 ribosomal protein S10 0.00980972
ATP6V1D ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D 0.00976917

decreased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.241933
VIM vimentin -0.233596
PM20D1 peptidase M20 domain containing 1 -0.193559
PDE4D phosphodiesterase 4D, cAMP-specific -0.193534
GRAMD1B GRAM domain containing 1B -0.190312
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.184669
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0917468
MT2A metallothionein 2A -0.0904242
TM4SF1 transmembrane 4 L six family member 1 -0.0882691
TMSB10 thymosin beta 10 -0.0864908
FTL ferritin, light polypeptide -0.0848633
AKAP12 A kinase (PRKA) anchor protein 12 -0.0843373
TFPI2 tissue factor pathway inhibitor 2 -0.0826425
THSD4 thrombospondin, type I, domain containing 4 -0.074484
PTMA prothymosin, alpha -0.0721174
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0661864
KIF5B kinesin family member 5B -0.0660441
WWOX WW domain containing oxidoreductase -0.0633054
BIRC3 baculoviral IAP repeat containing 3 -0.0619563
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0609295
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) -0.0601767
STC1 stanniocalcin 1 -0.0552848
CMIP c-Maf inducing protein -0.0515153
RPLP0 ribosomal protein, large, P0 -0.0510722
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0472341
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.047213
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0455646
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0433288
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0418263
NR4A2 nuclear receptor subfamily 4, group A, member 2 -0.0413609
MYOF myoferlin -0.0409149
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0400107
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0381781
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0375398
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0367079
RTN4 reticulon 4 -0.0362046
RPLP1 ribosomal protein, large, P1 -0.0357067
ERBIN erbb2 interacting protein -0.0345511
FGB fibrinogen beta chain -0.0341947
FNDC3B fibronectin type III domain containing 3B -0.0341252
FGG fibrinogen gamma chain -0.0338742
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0327615
TTC28 tetratricopeptide repeat domain 28 -0.0327518
TXNRD1 thioredoxin reductase 1 -0.032665
RBM25 RNA binding motif protein 25 -0.0325563
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0325337
DOCK5 dedicator of cytokinesis 5 -0.0322834
NCEH1 neutral cholesterol ester hydrolase 1 -0.0321822
ACTG1 actin gamma 1 -0.0319105
BASP1 brain abundant, membrane attached signal protein 1 -0.0315959
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.031505
ZFHX3 zinc finger homeobox 3 -0.031476
KTN1 kinectin 1 (kinesin receptor) -0.0309595
TPM3 tropomyosin 3 -0.0308977
TNPO1 transportin 1 -0.0306629
PRRC2C proline-rich coiled-coil 2C -0.0306023
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0305947
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0304044
MAML3 mastermind-like 3 (Drosophila) -0.0303997
ELL2 elongation factor, RNA polymerase II, 2 -0.0303813
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0303725
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0302545
MIS18BP1 MIS18 binding protein 1 -0.0297265
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0296682
GLIS3 GLIS family zinc finger 3 -0.0295087
RRM2 ribonucleotide reductase M2 -0.0295069
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0294971
MCL1 myeloid cell leukemia 1 -0.0294271
S100A6 S100 calcium binding protein A6 -0.0294186
CENPF centromere protein F, 350/400kDa -0.029247
NHSL1 NHS-like 1 -0.0292357
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.0291093
RAD51B RAD51 paralog B -0.0290322
SLC38A2 solute carrier family 38, member 2 -0.0289666
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.028895
ASPH aspartate beta-hydroxylase -0.0282984
DST dystonin -0.0281724
NEBL nebulette -0.0279393
HMGB1 high mobility group box 1 -0.0277236
PDE8A phosphodiesterase 8A -0.0272689
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0271326
TOP1 topoisomerase (DNA) I -0.0270448
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0268303
C15ORF48 chromosome 15 open reading frame 48 -0.026642
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0264369
LOC102724023 ES1 protein homolog, mitochondrial -0.026218
KMT2C lysine (K)-specific methyltransferase 2C -0.0261688
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.025936
TPM4 tropomyosin 4 -0.0258794
RPL8 ribosomal protein L8 -0.0258692
EIF5B eukaryotic translation initiation factor 5B -0.0258138
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0257838
FBXO11 F-box protein 11 -0.0256638
TPX2 TPX2, microtubule-associated -0.0256496
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0255637
PDIA3 protein disulfide isomerase family A, member 3 -0.0254024
YY1 YY1 transcription factor -0.0252472
ANXA2 annexin A2 -0.0252321
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0250899
MTDH metadherin -0.0249005