Trifluridine_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trifluridine perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trifluridine_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.140684
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.123377
MT2A metallothionein 2A 0.121433
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.110256
LDHA lactate dehydrogenase A 0.10522
B2M beta-2-microglobulin 0.0936981
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0878567
CD44 CD44 molecule (Indian blood group) 0.0866487
ANXA2 annexin A2 0.075218
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0711513
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0666749
CSTB cystatin B (stefin B) 0.0662209
CAVIN1 caveolae associated protein 1 0.0655678
LOX lysyl oxidase 0.065017
SAMD9 sterile alpha motif domain containing 9 0.0647295
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0631874
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0604058
ENO1 enolase 1, (alpha) 0.0584136
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0559911
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0554491
SMC4 structural maintenance of chromosomes 4 0.0522307
DST dystonin 0.0494929
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0494152
NFE2L1 nuclear factor, erythroid 2-like 1 0.0491572
SH3KBP1 SH3-domain kinase binding protein 1 0.0479336
MKI67 marker of proliferation Ki-67 0.0469638
HMGB2 high mobility group box 2 0.04647
KLF6 Kruppel-like factor 6 0.0456348
STC1 stanniocalcin 1 0.0444907
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0439602
CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3 0.0416053
SQSTM1 sequestosome 1 0.0412717
RTN4 reticulon 4 0.0395992
CSNK1A1 casein kinase 1, alpha 1 0.0394848
SRRM2 serine/arginine repetitive matrix 2 0.0383405
THBS2 thrombospondin 2 0.0372896
COL3A1 collagen, type III, alpha 1 0.0367898
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0364922
SEPTIN7 septin 7 0.0358085
TUBB4B tubulin, beta 4B class IVb 0.0348855
NAP1L1 nucleosome assembly protein 1-like 1 0.0337462
TPR translocated promoter region, nuclear basket protein 0.0335243
TPM3 tropomyosin 3 0.0334524
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0331921
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0328277
GOLGA4 golgin A4 0.03243
BZW1 basic leucine zipper and W2 domains 1 0.0324232
HDAC9 histone deacetylase 9 0.0324111
APP amyloid beta (A4) precursor protein 0.0323043
FNDC3B fibronectin type III domain containing 3B 0.0320263
IQGAP1 IQ motif containing GTPase activating protein 1 0.0319285
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0316762
IFI6 interferon, alpha-inducible protein 6 0.0315046
PRRC2C proline-rich coiled-coil 2C 0.031263
ALCAM activated leukocyte cell adhesion molecule 0.0307729
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0306123
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0301283
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0300661
IFITM3 interferon induced transmembrane protein 3 0.0296306
ELL2 elongation factor, RNA polymerase II, 2 0.0295763
CEP350 centrosomal protein 350kDa 0.0295694
OGA O-GlcNAcase 0.0295546
RHOBTB3 Rho-related BTB domain containing 3 0.0292433
RPS3 ribosomal protein S3 0.0289636
PDIA3 protein disulfide isomerase family A, member 3 0.0287917
ANLN anillin, actin binding protein 0.028341
PLAUR plasminogen activator, urokinase receptor 0.0280298
PSD3 pleckstrin and Sec7 domain containing 3 0.0279089
DIAPH3 diaphanous-related formin 3 0.0274271
AFF4 AF4/FMR2 family, member 4 0.0270945
SON SON DNA binding protein 0.0270043
GLIS3 GLIS family zinc finger 3 0.0267852
IFI16 interferon, gamma-inducible protein 16 0.0267118
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0267051
PKM pyruvate kinase, muscle 0.0266034
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0263796
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0262728
CENPF centromere protein F, 350/400kDa 0.0261733
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0257812
PRSS23 protease, serine, 23 0.0256158
RAI14 retinoic acid induced 14 0.0253923
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0251316
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0248473
ITGA6 integrin, alpha 6 0.0245701
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B 0.0245048
SET SET nuclear proto-oncogene 0.0243957
MYADM myeloid-associated differentiation marker 0.024185
ATP13A3 ATPase type 13A3 0.0240412
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0240133
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0240097
MAP1B microtubule-associated protein 1B 0.024006
MIB1 mindbomb E3 ubiquitin protein ligase 1 0.0236722
ITSN2 intersectin 2 0.0235688
SRSF11 serine/arginine-rich splicing factor 11 0.0234241
KIF5B kinesin family member 5B 0.0233982
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.0233745
TXNRD1 thioredoxin reductase 1 0.0229755
RPS12 ribosomal protein S12 0.0228275
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0227042
FLNA filamin A, alpha 0.0226651

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.510179
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.176329
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.142796
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.127138
SUCNR1 succinate receptor 1 -0.110715
S100A10 S100 calcium binding protein A10 -0.10773
TMSB10 thymosin beta 10 -0.105326
CDH13 cadherin 13 -0.103579
AHNAK AHNAK nucleoprotein -0.0983666
SLC39A11 solute carrier family 39, member 11 -0.0939152
AKAP12 A kinase (PRKA) anchor protein 12 -0.0815296
COL5A1 collagen, type V, alpha 1 -0.0774607
PLAT plasminogen activator, tissue -0.0755161
NAV1 neuron navigator 1 -0.0705448
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0685403
ABI3BP ABI family, member 3 (NESH) binding protein -0.0641956
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 -0.0639503
CD99 CD99 molecule -0.063911
CUX1 cut-like homeobox 1 -0.0578764
FN1 fibronectin 1 -0.0576709
MSI2 musashi RNA-binding protein 2 -0.0524902
TPM1 tropomyosin 1 (alpha) -0.0483299
ACTG1 actin gamma 1 -0.0433428
POTEF POTE ankyrin domain family, member F -0.0426519
AUTS2 autism susceptibility candidate 2 -0.0424252
KRT81 keratin 81, type II -0.042365
DIRAS3 DIRAS family, GTP-binding RAS-like 3 -0.0413766
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 -0.0411668
COL8A1 collagen, type VIII, alpha 1 -0.0402514
DGKG diacylglycerol kinase, gamma 90kDa -0.0392108
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0376363
FLT1 fms-related tyrosine kinase 1 -0.0368361
MRPS6 mitochondrial ribosomal protein S6 -0.0344315
RPL35A ribosomal protein L35a -0.0343737
EGFR epidermal growth factor receptor -0.0336216
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0329647
LY6E lymphocyte antigen 6 complex, locus E -0.0317751
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0316482
SORBS2 sorbin and SH3 domain containing 2 -0.0300473
CYTH3 cytohesin 3 -0.0298693
TNS3 tensin 3 -0.0296453
INSIG1 insulin induced gene 1 -0.0296358
UBC ubiquitin C -0.0283101
EFNA5 ephrin-A5 -0.0280545
VEGFC vascular endothelial growth factor C -0.0279675
MT1X metallothionein 1X -0.0274295
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0260318
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.025764
COL5A2 collagen, type V, alpha 2 -0.0240057
ASTN2 astrotactin 2 -0.0237216
COL1A1 collagen, type I, alpha 1 -0.0233636
DLG1 discs, large homolog 1 (Drosophila) -0.0231685
TAPBP TAP binding protein (tapasin) -0.0229237
RPS15 ribosomal protein S15 -0.0225635
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0225314
INTS6 integrator complex subunit 6 -0.0225264
C12ORF75 chromosome 12 open reading frame 75 -0.0223065
CCND1 cyclin D1 -0.0221645
NDRG1 N-myc downstream regulated 1 -0.0218538
OAZ1 ornithine decarboxylase antizyme 1 -0.0216158
RPL34 ribosomal protein L34 -0.0215177
DCLK2 doublecortin-like kinase 2 -0.0215117
RPS19 ribosomal protein S19 -0.0207045
FBXO11 F-box protein 11 -0.0205531
NCOR2 nuclear receptor corepressor 2 -0.0200691
RPL28 ribosomal protein L28 -0.0194802
RPS23 ribosomal protein S23 -0.0192764
PBX3 pre-B-cell leukemia homeobox 3 -0.0191687
AFF3 AF4/FMR2 family, member 3 -0.0185833
RPS11 ribosomal protein S11 -0.0184756
VEGFA vascular endothelial growth factor A -0.0184281
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0180648
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0179553
IL32 interleukin 32 -0.0178517
SASH1 SAM and SH3 domain containing 1 -0.017447
FBXL7 F-box and leucine-rich repeat protein 7 -0.0174033
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit -0.017284
OBSCN obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF -0.0172396
RHOA ras homolog family member A -0.0172216
LHFPL2 lipoma HMGIC fusion partner-like 2 -0.0171736
GNB4 guanine nucleotide binding protein (G protein), beta polypeptide 4 -0.0171479
MX2 MX dynamin-like GTPase 2 -0.0168511
JAZF1 JAZF zinc finger 1 -0.0167527
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.016707
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0165573
N4BP2L2 NEDD4 binding protein 2-like 2 -0.016379
SAMD9L sterile alpha motif domain containing 9-like -0.0163189
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0160101
TOX thymocyte selection-associated high mobility group box -0.0159371
CD63 CD63 molecule -0.0158104
RUNX1 runt-related transcription factor 1 -0.0157792
HLA-B major histocompatibility complex, class I, B -0.0155669
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0155663
XKR6 XK, Kell blood group complex subunit-related family, member 6 -0.0153004
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) -0.0152773
THY1 Thy-1 cell surface antigen -0.0151165
GSE1 Gse1 coiled-coil protein -0.0150671
TNRC18 trinucleotide repeat containing 18 -0.0149663
S100A6 S100 calcium binding protein A6 -0.0149317
PPARD peroxisome proliferator-activated receptor delta -0.0149026