Trifluridine_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trifluridine perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trifluridine_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.247086
MACC1 metastasis associated in colon cancer 1 0.155096
LCN2 lipocalin 2 0.132773
B2M beta-2-microglobulin 0.124426
MYO1E myosin IE 0.116448
ANXA2 annexin A2 0.0958591
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0944462
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0918859
C6ORF132 chromosome 6 open reading frame 132 0.0709692
CXCL8 chemokine (C-X-C motif) ligand 8 0.0686423
IFI6 interferon, alpha-inducible protein 6 0.0654338
EPS8 epidermal growth factor receptor pathway substrate 8 0.0618291
AREG amphiregulin 0.0600709
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0574111
EFNB2 ephrin-B2 0.0569526
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0564773
RUNX1 runt-related transcription factor 1 0.0509442
KLF6 Kruppel-like factor 6 0.0506171
NEBL nebulette 0.0475553
PERP PERP, TP53 apoptosis effector 0.0463524
TJP1 tight junction protein 1 0.0447701
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.0435897
EREG epiregulin 0.0432206
CLDN4 claudin 4 0.0424023
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0423814
SQSTM1 sequestosome 1 0.042063
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0420337
TXNRD1 thioredoxin reductase 1 0.0406219
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0405913
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0403731
KLF5 Kruppel-like factor 5 (intestinal) 0.0398652
ENO1 enolase 1, (alpha) 0.0386639
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0385853
DSPP dentin sialophosphoprotein 0.0376946
ZFP36L1 ZFP36 ring finger protein-like 1 0.0373128
VMP1 vacuole membrane protein 1 0.037097
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0369706
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0364256
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0354365
SOX9 SRY (sex determining region Y)-box 9 0.0353863
MX2 MX dynamin-like GTPase 2 0.0346472
FTL ferritin, light polypeptide 0.0341183
ARHGAP5 Rho GTPase activating protein 5 0.0337204
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0337042
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0336739
PTBP3 polypyrimidine tract binding protein 3 0.0336372
ARGLU1 arginine and glutamate rich 1 0.0325407
IFNGR1 interferon gamma receptor 1 0.0324958
FNDC3A fibronectin type III domain containing 3A 0.0314907
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0314881
ZNF292 zinc finger protein 292 0.0313397
DUSP16 dual specificity phosphatase 16 0.0310723
ST14 suppression of tumorigenicity 14 (colon carcinoma) 0.0305263
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0304978
HKDC1 hexokinase domain containing 1 0.0304478
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0301265
IFI27 interferon, alpha-inducible protein 27 0.0296115
PRSS3 protease, serine, 3 0.0287989
USP54 ubiquitin specific peptidase 54 0.028673
PLAUR plasminogen activator, urokinase receptor 0.0286547
FTH1 ferritin, heavy polypeptide 1 0.0282882
LIMA1 LIM domain and actin binding 1 0.0282534
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0281101
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0280842
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0279225
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0274488
LDHA lactate dehydrogenase A 0.0274301
ITGA6 integrin, alpha 6 0.0273181
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0270127
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.026592
KLF3 Kruppel-like factor 3 (basic) 0.0265429
B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 0.0264079
BCL2L1 BCL2-like 1 0.0259219
HLA-A major histocompatibility complex, class I, A 0.025513
SLK STE20-like kinase 0.025415
RPS3 ribosomal protein S3 0.0251137
DST dystonin 0.0249569
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0243599
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0242741
SAMD9 sterile alpha motif domain containing 9 0.0235196
LURAP1L leucine rich adaptor protein 1-like 0.0235137
TES testin LIM domain protein 0.0231217
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0230851
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.02308
ETV6 ets variant 6 0.0230736
YBX3 Y box binding protein 3 0.023039
ERRFI1 ERBB receptor feedback inhibitor 1 0.0229141
SDCBP2 syndecan binding protein (syntenin) 2 0.0226329
IRS2 insulin receptor substrate 2 0.0225112
ANKRD12 ankyrin repeat domain 12 0.0224418
EHF ets homologous factor 0.0222863
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0220072
TACSTD2 tumor-associated calcium signal transducer 2 0.0219346
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0217394
ITGB8 integrin, beta 8 0.0214376
LAMC2 laminin, gamma 2 0.0214158
NTN4 netrin 4 0.0211246
MEIS2 Meis homeobox 2 0.0210705
FAT1 FAT atypical cadherin 1 0.0210469
BLZF1 basic leucine zipper nuclear factor 1 0.0210326

decreased expression

Symbol Name Standardized Value
LYZ lysozyme -0.237181
EPSTI1 epithelial stromal interaction 1 (breast) -0.166319
N4BP2L2 NEDD4 binding protein 2-like 2 -0.127792
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.105944
ZMYND8 zinc finger, MYND-type containing 8 -0.103034
RPL35A ribosomal protein L35a -0.0836654
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0823551
GMDS GDP-mannose 4,6-dehydratase -0.0716186
RABGAP1L RAB GTPase activating protein 1-like -0.0698559
PTMA prothymosin, alpha -0.0692408
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0690577
RAD51B RAD51 paralog B -0.0680278
NPSR1 neuropeptide S receptor 1 -0.0671952
BTBD9 BTB (POZ) domain containing 9 -0.0651467
IGFBP3 insulin-like growth factor binding protein 3 -0.0644205
XAF1 XIAP associated factor 1 -0.0631949
PRKCA protein kinase C, alpha -0.0602046
STS steroid sulfatase (microsomal), isozyme S -0.0592426
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0570743
RPL34 ribosomal protein L34 -0.054699
RIGI RNA sensor RIG-I -0.0544529
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0542531
INTS6 integrator complex subunit 6 -0.0503879
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like -0.0484594
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0476174
MAML2 mastermind-like 2 (Drosophila) -0.0458011
ACTG1 actin gamma 1 -0.0451236
TM4SF1 transmembrane 4 L six family member 1 -0.0450346
TRIO trio Rho guanine nucleotide exchange factor -0.0449528
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0447195
TXNIP thioredoxin interacting protein -0.0438421
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.043803
ZNF609 zinc finger protein 609 -0.0435553
HLA-B major histocompatibility complex, class I, B -0.043198
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0429785
SSH2 slingshot protein phosphatase 2 -0.0422308
TNS4 tensin 4 -0.0417568
PLSCR2 phospholipid scramblase 2 -0.0410259
MAP7 microtubule-associated protein 7 -0.0407112
PATJ PATJ crumbs cell polarity complex component -0.0393733
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0392862
ATXN1 ataxin 1 -0.038561
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0380973
DSCAML1 Down syndrome cell adhesion molecule like 1 -0.0380222
EPHB2 EPH receptor B2 -0.0373029
EGLN3 egl-9 family hypoxia-inducible factor 3 -0.0367694
NF1 neurofibromin 1 -0.0363932
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0359351
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0354879
UBC ubiquitin C -0.0343377
PTK2 protein tyrosine kinase 2 -0.0343167
ASPH aspartate beta-hydroxylase -0.0341836
PLSCR1 phospholipid scramblase 1 -0.0328612
ANKRD10 ankyrin repeat domain 10 -0.0327775
SP100 SP100 nuclear antigen -0.0323397
DENND1A DENN/MADD domain containing 1A -0.0310804
RPS6 ribosomal protein S6 -0.0309694
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0306304
TSHZ2 teashirt zinc finger homeobox 2 -0.0302248
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.0297692
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0293036
KDM4C lysine (K)-specific demethylase 4C -0.0292483
POU2F2 POU class 2 homeobox 2 -0.0290998
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2 -0.0289082
MX1 MX dynamin-like GTPase 1 -0.0288455
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0285056
ARL4C ADP-ribosylation factor-like 4C -0.028363
SORBS1 sorbin and SH3 domain containing 1 -0.0283497
MED13L mediator complex subunit 13-like -0.0282216
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0279836
FNDC3B fibronectin type III domain containing 3B -0.0279139
TAOK3 TAO kinase 3 -0.0278678
APOL6 apolipoprotein L, 6 -0.0278676
CANX calnexin -0.0275795
PMP22 peripheral myelin protein 22 -0.0273822
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0273618
EIF1 eukaryotic translation initiation factor 1 -0.0272696
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0270799
NKD1 naked cuticle homolog 1 (Drosophila) -0.0269727
CUX1 cut-like homeobox 1 -0.0267469
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0266471
PHF20 PHD finger protein 20 -0.0265094
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0263866
HSPH1 heat shock 105kDa/110kDa protein 1 -0.026189
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0261262
MPHOSPH8 M-phase phosphoprotein 8 -0.0259998
PHF3 PHD finger protein 3 -0.0259839
TBC1D22A TBC1 domain family, member 22A -0.0258689
UBE2R2 ubiquitin-conjugating enzyme E2R 2 -0.0257555
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0256317
GOSR2 golgi SNAP receptor complex member 2 -0.0254169
CYRIB CYFIP related Rac1 interactor B -0.0251731
EXT1 exostosin glycosyltransferase 1 -0.0250548
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0248312
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0244051
NUMB numb homolog (Drosophila) -0.0239451
PTGR1 prostaglandin reductase 1 -0.0238287
NCOR1 nuclear receptor corepressor 1 -0.0236595
AFF1 AF4/FMR2 family, member 1 -0.0235666
TAS2R14 taste receptor, type 2, member 14 -0.023516