Trifluridine_NCI-H1792 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trifluridine perturbation in NCI-H1792 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trifluridine_NCI-H1792 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.140898
TIMP1 TIMP metallopeptidase inhibitor 1 0.131255
AKAP12 A kinase (PRKA) anchor protein 12 0.123447
LOX lysyl oxidase 0.116309
FTH1 ferritin, heavy polypeptide 1 0.115226
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.09861
FN1 fibronectin 1 0.0976509
NTN4 netrin 4 0.0946482
ENO1 enolase 1, (alpha) 0.0858997
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.0851171
CD44 CD44 molecule (Indian blood group) 0.0816644
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0750734
PSD3 pleckstrin and Sec7 domain containing 3 0.0718726
SYT1 synaptotagmin I 0.0712103
ARHGAP5 Rho GTPase activating protein 5 0.0698931
SAMD9 sterile alpha motif domain containing 9 0.0667566
MAP1B microtubule-associated protein 1B 0.0662523
ANGPTL4 angiopoietin-like 4 0.0660734
DDIT3 DNA-damage-inducible transcript 3 0.0660234
FTL ferritin, light polypeptide 0.0631916
IFI6 interferon, alpha-inducible protein 6 0.0575458
RPS12 ribosomal protein S12 0.0570222
LDHA lactate dehydrogenase A 0.0565228
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0553297
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0540744
PLIN2 perilipin 2 0.0539657
HMGA2 high mobility group AT-hook 2 0.0536089
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0514505
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.051407
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0488551
HIPK2 homeodomain interacting protein kinase 2 0.0480842
NDRG1 N-myc downstream regulated 1 0.0464743
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.046391
SQSTM1 sequestosome 1 0.0452931
B2M beta-2-microglobulin 0.0448399
RNASEH2A ribonuclease H2, subunit A 0.0443067
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0421205
CA12 carbonic anhydrase XII 0.0420788
ANXA2 annexin A2 0.0412219
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0379101
AKAP9 A kinase (PRKA) anchor protein 9 0.0374964
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0366359
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0365466
KTN1 kinectin 1 (kinesin receptor) 0.0361388
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0360199
FAM13A family with sequence similarity 13, member A 0.0353139
NAP1L1 nucleosome assembly protein 1-like 1 0.0341824
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.033986
HEG1 heart development protein with EGF-like domains 1 0.0335915
ADD3 adducin 3 (gamma) 0.0331388
MBNL1 muscleblind-like splicing regulator 1 0.0328717
SYNJ2 synaptojanin 2 0.0325616
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0323663
IRAK2 interleukin-1 receptor-associated kinase 2 0.0321917
SOX4 SRY (sex determining region Y)-box 4 0.0320118
ZEB2 zinc finger E-box binding homeobox 2 0.0314195
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 0.0312881
PKM pyruvate kinase, muscle 0.0311954
SRRM2 serine/arginine repetitive matrix 2 0.0293621
DUSP6 dual specificity phosphatase 6 0.0288059
RAB27B RAB27B, member RAS oncogene family 0.0286746
S100A6 S100 calcium binding protein A6 0.0286433
APLP2 amyloid beta (A4) precursor-like protein 2 0.0285689
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0279253
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0278605
HMGA1 high mobility group AT-hook 1 0.0275296
MYADM myeloid-associated differentiation marker 0.0273288
TPT1 tumor protein, translationally-controlled 1 0.0273099
PRSS23 protease, serine, 23 0.0272305
PDIA3 protein disulfide isomerase family A, member 3 0.0271629
GLCCI1 glucocorticoid induced 1 0.0269659
EGR1 early growth response 1 0.0265159
EREG epiregulin 0.0265107
LOC102724023 ES1 protein homolog, mitochondrial 0.0264294
KLF6 Kruppel-like factor 6 0.0263644
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0263622
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0261745
WWTR1 WW domain containing transcription regulator 1 0.026145
IFI16 interferon, gamma-inducible protein 16 0.0259953
EZR ezrin 0.0259414
TOP1 topoisomerase (DNA) I 0.025843
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0255741
HILPDA hypoxia inducible lipid droplet-associated 0.0252849
ZFP36L1 ZFP36 ring finger protein-like 1 0.0252655
KIF13B kinesin family member 13B 0.025141
SLTM SAFB-like, transcription modulator 0.0249437
ALCAM activated leukocyte cell adhesion molecule 0.024642
OS9 osteosarcoma amplified 9, endoplasmic reticulum lectin 0.0246062
JUN jun proto-oncogene 0.0245993
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0245875
GJA1 gap junction protein, alpha 1, 43kDa 0.0244806
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0244594
RAI14 retinoic acid induced 14 0.0243592
HLA-A major histocompatibility complex, class I, A 0.0242816
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0242021
RPS17 ribosomal protein S17 0.0240189
WLS wntless Wnt ligand secretion mediator 0.0236873
KRT19 keratin 19, type I 0.0236482
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 0.0235651
LGALS1 lectin, galactoside-binding, soluble, 1 0.023367

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.202258
SDK1 sidekick cell adhesion molecule 1 -0.152818
IGFBP3 insulin-like growth factor binding protein 3 -0.146106
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.119296
NAMPT nicotinamide phosphoribosyltransferase -0.118815
PDE4D phosphodiesterase 4D, cAMP-specific -0.114281
CXCL8 chemokine (C-X-C motif) ligand 8 -0.11265
NRG1 neuregulin 1 -0.0904848
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0856843
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0781334
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0781303
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0774509
RPL35A ribosomal protein L35a -0.0758378
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0749058
USP34 ubiquitin specific peptidase 34 -0.0740642
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0699141
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0649176
ZMYND8 zinc finger, MYND-type containing 8 -0.0646184
RBM39 RNA binding motif protein 39 -0.0645129
CDH13 cadherin 13 -0.0617256
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0609286
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0597978
EIF1 eukaryotic translation initiation factor 1 -0.059328
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0583747
LMAN1 lectin, mannose-binding, 1 -0.0573825
OSMR oncostatin M receptor -0.0554691
C15ORF48 chromosome 15 open reading frame 48 -0.0543451
MTSS1 metastasis suppressor 1 -0.0526242
VRK2 vaccinia related kinase 2 -0.0511371
AHNAK AHNAK nucleoprotein -0.0508613
AKAP13 A kinase (PRKA) anchor protein 13 -0.0496616
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0483768
EFNA5 ephrin-A5 -0.04764
RPS19 ribosomal protein S19 -0.0468949
UBC ubiquitin C -0.046338
TM4SF1 transmembrane 4 L six family member 1 -0.0463238
NAV2 neuron navigator 2 -0.0449774
ATG7 autophagy related 7 -0.0440982
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0437325
FAM20C family with sequence similarity 20, member C -0.0434816
PTK2 protein tyrosine kinase 2 -0.042661
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0424366
DPYD dihydropyrimidine dehydrogenase -0.0420882
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0418883
NUMB numb homolog (Drosophila) -0.0417384
SREBF2 sterol regulatory element binding transcription factor 2 -0.0415798
BASP1 brain abundant, membrane attached signal protein 1 -0.0411516
RPL34 ribosomal protein L34 -0.0409472
PID1 phosphotyrosine interaction domain containing 1 -0.0407371
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.040627
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) -0.0390906
DOCK5 dedicator of cytokinesis 5 -0.0390065
BMAL2 basic helix-loop-helix ARNT like 2 -0.0379069
ACTG1 actin gamma 1 -0.0373544
DNER delta/notch-like EGF repeat containing -0.0373044
MAML3 mastermind-like 3 (Drosophila) -0.036962
RPS21 ribosomal protein S21 -0.0369044
FRMD4A FERM domain containing 4A -0.0365481
ITCH itchy E3 ubiquitin protein ligase -0.0359887
TFPI2 tissue factor pathway inhibitor 2 -0.0358851
GRB10 growth factor receptor-bound protein 10 -0.0354356
TMEM165 transmembrane protein 165 -0.0351087
ZNF638 zinc finger protein 638 -0.0346967
RPS6 ribosomal protein S6 -0.0340273
ABCA6 ATP-binding cassette, sub-family A (ABC1), member 6 -0.0336393
RPL23 ribosomal protein L23 -0.0335457
RPL32 ribosomal protein L32 -0.0333698
KYNU kynureninase -0.0332812
TBC1D22A TBC1 domain family, member 22A -0.0331779
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0327291
ZBTB20 zinc finger and BTB domain containing 20 -0.0321309
RPS11 ribosomal protein S11 -0.0319788
RPS23 ribosomal protein S23 -0.031892
CFDP1 craniofacial development protein 1 -0.0317038
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0316342
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0314477
ADAM28 ADAM metallopeptidase domain 28 -0.0313104
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0312127
TRIO trio Rho guanine nucleotide exchange factor -0.0308805
DIAPH2 diaphanous-related formin 2 -0.030707
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0302703
PYGL phosphorylase, glycogen, liver -0.0299868
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0299739
KDM2A lysine (K)-specific demethylase 2A -0.0298514
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0296532
TAS2R14 taste receptor, type 2, member 14 -0.0295813
IGF1R insulin-like growth factor 1 receptor -0.0289191
TMEM263 transmembrane protein 263 -0.0287999
LIMCH1 LIM and calponin homology domains 1 -0.0285163
NAV3 neuron navigator 3 -0.0283135
S100A10 S100 calcium binding protein A10 -0.028286
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0282229
UGP2 UDP-glucose pyrophosphorylase 2 -0.0282009
ETV6 ets variant 6 -0.0280658
BTBD9 BTB (POZ) domain containing 9 -0.0279761
DLG1 discs, large homolog 1 (Drosophila) -0.0278444
NHSL1 NHS-like 1 -0.0275092
PPIB peptidylprolyl isomerase B (cyclophilin B) -0.0274606
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0273465
CANX calnexin -0.0270271