Trifluridine_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trifluridine perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trifluridine_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.207285
MT2A metallothionein 2A 0.164815
VIM vimentin 0.145985
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.132122
LDHA lactate dehydrogenase A 0.119123
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.106236
S100A6 S100 calcium binding protein A6 0.10158
PDE4D phosphodiesterase 4D, cAMP-specific 0.0907646
PYGL phosphorylase, glycogen, liver 0.0801779
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0791993
MCL1 myeloid cell leukemia 1 0.0771132
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.070865
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0689153
ANGPTL4 angiopoietin-like 4 0.0660262
RPS8 ribosomal protein S8 0.0650531
STC1 stanniocalcin 1 0.0648919
FMNL2 formin-like 2 0.062193
FAM107B family with sequence similarity 107, member B 0.0594538
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0584495
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0580405
DHRS7 dehydrogenase/reductase (SDR family) member 7 0.0528311
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0527344
ARHGAP26 Rho GTPase activating protein 26 0.0513787
TPI1 triosephosphate isomerase 1 0.0506155
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0505176
BASP1 brain abundant, membrane attached signal protein 1 0.0502917
IGFBP3 insulin-like growth factor binding protein 3 0.050053
RPS3 ribosomal protein S3 0.048978
TPT1 tumor protein, translationally-controlled 1 0.0469285
FLNB filamin B, beta 0.0467721
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0464696
FNDC3B fibronectin type III domain containing 3B 0.0457181
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0456039
LOC102724023 ES1 protein homolog, mitochondrial 0.0450317
HLA-A major histocompatibility complex, class I, A 0.0442903
WAC WW domain containing adaptor with coiled-coil 0.041695
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0409484
SVIL supervillin 0.0392311
RPS2 ribosomal protein S2 0.0386163
THSD4 thrombospondin, type I, domain containing 4 0.0373434
PDIA3 protein disulfide isomerase family A, member 3 0.0357936
CSNK1A1 casein kinase 1, alpha 1 0.0353468
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0353185
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.034888
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0348454
MAML3 mastermind-like 3 (Drosophila) 0.0336504
TPM3 tropomyosin 3 0.0334109
CALR calreticulin 0.0333794
SQSTM1 sequestosome 1 0.0331875
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0325844
MYOF myoferlin 0.0321367
SFTPA2 surfactant protein A2 0.0317752
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0316324
ZBTB20 zinc finger and BTB domain containing 20 0.0315448
NDRG1 N-myc downstream regulated 1 0.0313747
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0313463
PKM pyruvate kinase, muscle 0.0311148
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0310727
RAB7A RAB7A, member RAS oncogene family 0.0308888
MYADM myeloid-associated differentiation marker 0.0304699
ANXA1 annexin A1 0.0301483
CHD1L chromodomain helicase DNA binding protein 1-like 0.0299457
FNBP1L formin binding protein 1-like 0.0276637
MYO1E myosin IE 0.0275314
DDIT4 DNA-damage-inducible transcript 4 0.027488
B2M beta-2-microglobulin 0.0274731
JMJD1C jumonji domain containing 1C 0.0274705
ALCAM activated leukocyte cell adhesion molecule 0.0271731
PDE10A phosphodiesterase 10A 0.0268428
SH3KBP1 SH3-domain kinase binding protein 1 0.0266947
TIMP1 TIMP metallopeptidase inhibitor 1 0.0266543
SAMD4A sterile alpha motif domain containing 4A 0.0266526
CDCP1 CUB domain containing protein 1 0.0265826
NAP1L1 nucleosome assembly protein 1-like 1 0.0263829
HYOU1 hypoxia up-regulated 1 0.026133
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0258517
ENO1 enolase 1, (alpha) 0.0252118
MACF1 microtubule-actin crosslinking factor 1 0.0248133
NEBL nebulette 0.0245505
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0244668
KIAA0319 KIAA0319 0.0243223
ZSWIM6 zinc finger, SWIM-type containing 6 0.0242073
IGF2 insulin-like growth factor 2 0.0239722
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0239158
SLMAP sarcolemma associated protein 0.023763
BAIAP2L1 BAI1-associated protein 2-like 1 0.0236311
RPS12 ribosomal protein S12 0.0232401
JUN jun proto-oncogene 0.0231822
RPS7 ribosomal protein S7 0.0230196
TRIO trio Rho guanine nucleotide exchange factor 0.0229769
BZW1 basic leucine zipper and W2 domains 1 0.0229373
CAVIN1 caveolae associated protein 1 0.0229324
CCNY cyclin Y 0.0228728
ARPC1B actin related protein 2/3 complex, subunit 1B, 41kDa 0.0226657
FLNA filamin A, alpha 0.0221536
EGR1 early growth response 1 0.0215194
SBF2 SET binding factor 2 0.0212536
KIF13A kinesin family member 13A 0.0211389
HLA-B major histocompatibility complex, class I, B 0.0207302
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.020689

decreased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 -0.122035
TMSB10 thymosin beta 10 -0.0957561
PM20D1 peptidase M20 domain containing 1 -0.0950441
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0937128
TM4SF1 transmembrane 4 L six family member 1 -0.0869758
FGB fibrinogen beta chain -0.0730968
CENPF centromere protein F, 350/400kDa -0.070229
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0662319
GRAMD1B GRAM domain containing 1B -0.0644018
RPS19 ribosomal protein S19 -0.0614411
WDR43 WD repeat domain 43 -0.0589332
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0554689
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) -0.0546515
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0538382
BIRC3 baculoviral IAP repeat containing 3 -0.0534644
MKI67 marker of proliferation Ki-67 -0.0527858
RPS21 ribosomal protein S21 -0.0519422
RPS29 ribosomal protein S29 -0.050676
RAD21 RAD21 homolog (S. pombe) -0.0483954
EIF1 eukaryotic translation initiation factor 1 -0.047856
RPL35A ribosomal protein L35a -0.0451588
MIS18BP1 MIS18 binding protein 1 -0.0450087
NRG1 neuregulin 1 -0.0427768
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0416379
RPL36 ribosomal protein L36 -0.0403609
SLC38A2 solute carrier family 38, member 2 -0.0396744
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0394861
NFE2L2 nuclear factor, erythroid 2-like 2 -0.0389208
KLF6 Kruppel-like factor 6 -0.0386564
RPL32 ribosomal protein L32 -0.0386381
ATP5F1B ATP synthase F1 subunit beta -0.0368304
RAB10 RAB10, member RAS oncogene family -0.036223
ANLN anillin, actin binding protein -0.0350002
DEK DEK proto-oncogene -0.0348936
RPLP1 ribosomal protein, large, P1 -0.0343198
RPL23 ribosomal protein L23 -0.0338897
TPX2 TPX2, microtubule-associated -0.0335184
KHDC4 KH domain containing 4, pre-mRNA splicing factor -0.0332091
WTAP Wilms tumor 1 associated protein -0.0329507
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 -0.0325338
RTN4 reticulon 4 -0.0321507
RHEB Ras homolog enriched in brain -0.0318581
AHNAK AHNAK nucleoprotein -0.0318345
CENPE centromere protein E, 312kDa -0.0308181
ACTG1 actin gamma 1 -0.0307861
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0304517
G2E3 G2/M-phase specific E3 ubiquitin protein ligase -0.030408
SP3 Sp3 transcription factor -0.0302797
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0300851
RPS15 ribosomal protein S15 -0.0299407
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0299024
RPS5 ribosomal protein S5 -0.0298557
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0295883
FGG fibrinogen gamma chain -0.0292123
TRMT112 tRNA methyltransferase 11-2 homolog (S. cerevisiae) -0.0289592
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0288619
BIRC2 baculoviral IAP repeat containing 2 -0.0285024
MARCHF7 membrane associated ring-CH-type finger 7 -0.0278856
MAP3K20 mitogen-activated protein kinase kinase kinase 20 -0.0277803
RPS16 ribosomal protein S16 -0.027557
HMGB1 high mobility group box 1 -0.0274807
NUSAP1 nucleolar and spindle associated protein 1 -0.0273163
RPL34 ribosomal protein L34 -0.0268528
YBX1 Y box binding protein 1 -0.0268289
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0267719
FGD6 FYVE, RhoGEF and PH domain containing 6 -0.0267062
COG5 component of oligomeric golgi complex 5 -0.0264348
RPS20 ribosomal protein S20 -0.0264258
NAMPT nicotinamide phosphoribosyltransferase -0.0264086
RRM2 ribonucleotide reductase M2 -0.0263756
ECT2 epithelial cell transforming 2 -0.0263661
MATR3 matrin 3 -0.0261518
RSL1D1 ribosomal L1 domain containing 1 -0.0257674
NCEH1 neutral cholesterol ester hydrolase 1 -0.0256073
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0254674
BICC1 BicC family RNA binding protein 1 -0.0254543
FAM168A family with sequence similarity 168, member A -0.025412
ATP5F1E ATP synthase F1 subunit epsilon -0.0253541
AGO2 argonaute RISC catalytic component 2 -0.0250739
TRIP12 thyroid hormone receptor interactor 12 -0.0248167
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0247895
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0247692
RASAL2 RAS protein activator like 2 -0.0245063
CYRIB CYFIP related Rac1 interactor B -0.0244187
MARCHF6 membrane associated ring-CH-type finger 6 -0.0241926
GLG1 golgi glycoprotein 1 -0.0241259
FGA fibrinogen alpha chain -0.0240448
DIAPH3 diaphanous-related formin 3 -0.0239682
HBS1L HBS1-like translational GTPase -0.0239288
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0239228
OLA1 Obg-like ATPase 1 -0.0238319
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0237495
TFG TRK-fused gene -0.0237357
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0236814
SGO2 shugoshin 2 -0.0236469
ACIN1 apoptotic chromatin condensation inducer 1 -0.0235602
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.023557
TMPO thymopoietin -0.0235208
ACTR3 ARP3 actin-related protein 3 homolog (yeast) -0.0233151
BHLHE40 basic helix-loop-helix family, member e40 -0.0232478