Trifluridine_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trifluridine perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trifluridine_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.149412
BACE2 beta-site APP-cleaving enzyme 2 0.139313
KYNU kynureninase 0.126309
LMO7 LIM domain 7 0.111132
MT2A metallothionein 2A 0.098244
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0956349
EGFR epidermal growth factor receptor 0.091208
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0832524
FTL ferritin, light polypeptide 0.0784884
ELL2 elongation factor, RNA polymerase II, 2 0.0766345
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0746742
RAD51B RAD51 paralog B 0.0738827
RIGI RNA sensor RIG-I 0.0705776
MYO10 myosin X 0.0698601
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0689852
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0688675
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0680668
BZW1 basic leucine zipper and W2 domains 1 0.0648403
FTH1 ferritin, heavy polypeptide 1 0.0600968
VIM vimentin 0.0593389
ANO6 anoctamin 6 0.0593056
USP53 ubiquitin specific peptidase 53 0.0592462
RPS12 ribosomal protein S12 0.0577171
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0576516
VGLL3 vestigial-like family member 3 0.0574425
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0573808
RPS17 ribosomal protein S17 0.0571401
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0567222
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.055809
NDRG1 N-myc downstream regulated 1 0.0556429
AREG amphiregulin 0.0506245
ARHGAP5 Rho GTPase activating protein 5 0.0499195
ENO1 enolase 1, (alpha) 0.0475772
BTG1 B-cell translocation gene 1, anti-proliferative 0.0469769
B2M beta-2-microglobulin 0.0468039
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0465802
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0463481
IGF1R insulin-like growth factor 1 receptor 0.0458852
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0452698
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0451589
MCL1 myeloid cell leukemia 1 0.0436806
STK17A serine/threonine kinase 17a 0.0436263
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0432958
RSAD2 radical S-adenosyl methionine domain containing 2 0.0431064
LIMCH1 LIM and calponin homology domains 1 0.0426247
TM4SF1 transmembrane 4 L six family member 1 0.0424246
IGF2 insulin-like growth factor 2 0.0421393
S100P S100 calcium binding protein P 0.0418786
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0418238
AKAP12 A kinase (PRKA) anchor protein 12 0.0417557
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0410255
RPS24 ribosomal protein S24 0.0409466
OASL 2'-5'-oligoadenylate synthetase-like 0.0408807
CXCL8 chemokine (C-X-C motif) ligand 8 0.0408486
MACC1 metastasis associated in colon cancer 1 0.0403807
LOC102724023 ES1 protein homolog, mitochondrial 0.0400211
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0392935
C6ORF132 chromosome 6 open reading frame 132 0.0392001
STC1 stanniocalcin 1 0.0388012
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0387783
RPL5 ribosomal protein L5 0.0384815
ARMH4 armadillo like helical domain containing 4 0.0383228
THSD4 thrombospondin, type I, domain containing 4 0.0381299
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0378704
RNF213 ring finger protein 213 0.0377069
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8 0.0371528
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0371046
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0368583
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0362148
ALCAM activated leukocyte cell adhesion molecule 0.0361008
LAMA4 laminin, alpha 4 0.036062
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0359971
RND3 Rho family GTPase 3 0.0359758
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0358242
RPL37 ribosomal protein L37 0.0357082
PARP4 poly (ADP-ribose) polymerase family, member 4 0.0355958
CLIP1 CAP-GLY domain containing linker protein 1 0.035213
AKAP13 A kinase (PRKA) anchor protein 13 0.0348761
PERP PERP, TP53 apoptosis effector 0.0347483
BHLHE40 basic helix-loop-helix family, member e40 0.0344998
AEBP2 AE binding protein 2 0.0344709
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0341861
WWC1 WW and C2 domain containing 1 0.033738
SAMD4A sterile alpha motif domain containing 4A 0.0333045
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 0.0332798
PHF3 PHD finger protein 3 0.0330293
CSNK1A1 casein kinase 1, alpha 1 0.0326679
NPAS2 neuronal PAS domain protein 2 0.03251
FMN1 formin 1 0.0324119
TJP1 tight junction protein 1 0.0322166
ZNF654 zinc finger protein 654 0.0320482
ASPH aspartate beta-hydroxylase 0.031822
GSK3B glycogen synthase kinase 3 beta 0.0317447
RPS16 ribosomal protein S16 0.0317015
TMSB10 thymosin beta 10 0.0314824
RPL28 ribosomal protein L28 0.0314063
R3HDM2 R3H domain containing 2 0.0312782
UGCG UDP-glucose ceramide glucosyltransferase 0.0311245
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.0311012
PRKCA protein kinase C, alpha 0.0310814

decreased expression

Symbol Name Standardized Value
GRB10 growth factor receptor-bound protein 10 -0.191589
PDE4D phosphodiesterase 4D, cAMP-specific -0.185942
IGFBP3 insulin-like growth factor binding protein 3 -0.128856
AHNAK AHNAK nucleoprotein -0.115062
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.101559
ERRFI1 ERBB receptor feedback inhibitor 1 -0.073323
MAML2 mastermind-like 2 (Drosophila) -0.0707396
CEMIP cell migration inducing protein, hyaluronan binding -0.0696213
ESYT2 extended synaptotagmin-like protein 2 -0.0666881
ATOSA atos homolog A -0.0654244
FDPS farnesyl diphosphate synthase -0.0614216
ABCG1 ATP-binding cassette, sub-family G (WHITE), member 1 -0.0608242
SHB Src homology 2 domain containing adaptor protein B -0.0598198
CD2AP CD2-associated protein -0.0564278
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0564138
IQGAP1 IQ motif containing GTPase activating protein 1 -0.0556515
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0550277
RIOK3 RIO kinase 3 -0.0548915
PTPRM protein tyrosine phosphatase, receptor type, M -0.0529128
WARS1 tryptophanyl-tRNA synthetase 1 -0.0525465
FAM13A family with sequence similarity 13, member A -0.051792
MMP1 matrix metallopeptidase 1 -0.0491868
COL6A3 collagen, type VI, alpha 3 -0.0491391
SND1 staphylococcal nuclease and tudor domain containing 1 -0.0487871
ADGRB3 adhesion G protein-coupled receptor B3 -0.0487312
MYOF myoferlin -0.0485304
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0477999
SF3B2 splicing factor 3b, subunit 2, 145kDa -0.0474696
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0474412
GARS1 glycyl-tRNA synthetase 1 -0.0466518
BRWD1 bromodomain and WD repeat domain containing 1 -0.0463571
SETD5 SET domain containing 5 -0.0462442
HELZ helicase with zinc finger -0.0459646
MIDN midnolin -0.0458658
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.045214
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0451
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0450645
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0448552
ARHGAP32 Rho GTPase activating protein 32 -0.0443363
MXD1 MAX dimerization protein 1 -0.0440382
PLAUR plasminogen activator, urokinase receptor -0.0440347
S100A8 S100 calcium binding protein A8 -0.0440302
GRB7 growth factor receptor-bound protein 7 -0.0438994
TRA2A transformer 2 alpha homolog (Drosophila) -0.0438854
MAST4 microtubule associated serine/threonine kinase family member 4 -0.0433755
TC2N tandem C2 domains, nuclear -0.0428707
TMEM41B transmembrane protein 41B -0.0427809
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0426464
HOMER1 homer scaffolding protein 1 -0.0415976
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0406032
SREBF2 sterol regulatory element binding transcription factor 2 -0.0405413
ANXA1 annexin A1 -0.0396665
KDM3A lysine (K)-specific demethylase 3A -0.0396215
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0394934
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0391365
FRMD5 FERM domain containing 5 -0.039119
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0391103
SRPK2 SRSF protein kinase 2 -0.0390252
KMT2C lysine (K)-specific methyltransferase 2C -0.0384683
ITGB4 integrin, beta 4 -0.0376893
THOC2 THO complex 2 -0.0375189
USP3 ubiquitin specific peptidase 3 -0.0368757
ANKRD28 ankyrin repeat domain 28 -0.0367235
AGFG1 ArfGAP with FG repeats 1 -0.0363665
ZNF609 zinc finger protein 609 -0.0362332
CA12 carbonic anhydrase XII -0.036214
RREB1 ras responsive element binding protein 1 -0.0357372
CDYL chromodomain protein, Y-like -0.03571
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0347633
DIAPH2 diaphanous-related formin 2 -0.0347345
NCOA3 nuclear receptor coactivator 3 -0.034642
TACC2 transforming, acidic coiled-coil containing protein 2 -0.0345639
PSD3 pleckstrin and Sec7 domain containing 3 -0.0342551
ATP13A3 ATPase type 13A3 -0.0341202
FBXO34 F-box protein 34 -0.0341068
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0336985
RBM39 RNA binding motif protein 39 -0.0335845
WASF2 WAS protein family, member 2 -0.0334076
PAIP2 poly(A) binding protein interacting protein 2 -0.0331769
TAS2R14 taste receptor, type 2, member 14 -0.0327689
CLINT1 clathrin interactor 1 -0.0327572
PAPOLA poly(A) polymerase alpha -0.0327477
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0326589
PDS5A PDS5 cohesin associated factor A -0.0324792
KDM7A lysine (K)-specific demethylase 7A -0.0319741
CDH13 cadherin 13 -0.0317763
USP15 ubiquitin specific peptidase 15 -0.0313927
PCBP2 poly(rC) binding protein 2 -0.0311581
HPCAL1 hippocalcin-like 1 -0.0310122
CD44 CD44 molecule (Indian blood group) -0.0309249
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) -0.0307621
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) -0.0306752
TMEM123 transmembrane protein 123 -0.0306632
SDK1 sidekick cell adhesion molecule 1 -0.0306238
OSBPL10 oxysterol binding protein-like 10 -0.0303284
ZBTB20 zinc finger and BTB domain containing 20 -0.0302848
JUP junction plakoglobin -0.0300155
TMEM263 transmembrane protein 263 -0.0297134
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0296896
ZNF638 zinc finger protein 638 -0.0296383