Trifluridine_NCI-H596 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trifluridine perturbation in NCI-H596 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trifluridine_NCI-H596 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
JMJD1C jumonji domain containing 1C 0.156209
MT2A metallothionein 2A 0.137081
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.133814
PGK1 phosphoglycerate kinase 1 0.115949
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.112463
NKD1 naked cuticle homolog 1 (Drosophila) 0.112421
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.110547
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.108057
GPC6 glypican 6 0.106327
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.105688
AFF4 AF4/FMR2 family, member 4 0.104376
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0976175
CSNK1A1 casein kinase 1, alpha 1 0.0967414
RPL26 ribosomal protein L26 0.0952984
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0888712
PSD3 pleckstrin and Sec7 domain containing 3 0.0873035
RPS12 ribosomal protein S12 0.0856908
ENO1 enolase 1, (alpha) 0.0823525
PDE4D phosphodiesterase 4D, cAMP-specific 0.0812805
FMN1 formin 1 0.0811929
FMNL2 formin-like 2 0.0783825
PKM pyruvate kinase, muscle 0.0757575
NALF1 NALCN channel auxiliary factor 1 0.0738834
TPT1 tumor protein, translationally-controlled 1 0.0709537
FTH1 ferritin, heavy polypeptide 1 0.0707408
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0702535
EXT1 exostosin glycosyltransferase 1 0.0691321
AOPEP aminopeptidase O (putative) 0.0689218
BACE2 beta-site APP-cleaving enzyme 2 0.0677449
SMC5 structural maintenance of chromosomes 5 0.0648566
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0645897
RPS3 ribosomal protein S3 0.0641062
VIM vimentin 0.062015
MON2 MON2 homolog (S. cerevisiae) 0.059077
FTL ferritin, light polypeptide 0.0577961
RPL18 ribosomal protein L18 0.0570784
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0566642
PRKCE protein kinase C, epsilon 0.0545994
SBF2 SET binding factor 2 0.0537701
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0528279
RPL37A ribosomal protein L37a 0.0526837
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.05173
ZBTB20 zinc finger and BTB domain containing 20 0.0514443
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) 0.0476639
SMYD3 SET and MYND domain containing 3 0.0458469
NLGN1 neuroligin 1 0.0452546
RB1CC1 RB1-inducible coiled-coil 1 0.0438587
FRMD4A FERM domain containing 4A 0.0436377
UBE2R2 ubiquitin-conjugating enzyme E2R 2 0.043572
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0434549
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0433944
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0404599
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0404454
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0380553
RPS25 ribosomal protein S25 0.0379891
FNDC3A fibronectin type III domain containing 3A 0.0378175
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0373228
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0373084
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0371965
B2M beta-2-microglobulin 0.0371781
RPS6 ribosomal protein S6 0.0366025
MATR3 matrin 3 0.0360741
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0356165
TRIP12 thyroid hormone receptor interactor 12 0.0353029
RAB7A RAB7A, member RAS oncogene family 0.0353001
USP34 ubiquitin specific peptidase 34 0.0342432
IGF2 insulin-like growth factor 2 0.034152
PDIA3 protein disulfide isomerase family A, member 3 0.0335047
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0334751
PTPRM protein tyrosine phosphatase, receptor type, M 0.0332884
ERBIN erbb2 interacting protein 0.0328942
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0321169
ACTG1 actin gamma 1 0.0318085
RPLP2 ribosomal protein, large, P2 0.0305658
TXNRD1 thioredoxin reductase 1 0.0299693
GOLGB1 golgin B1 0.0296263
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0276508
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0265115
PIBF1 progesterone immunomodulatory binding factor 1 0.0264032
H3-3B H3.3 histone B 0.0247609
FRYL FRY-like 0.0221754
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0220996
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0217032
PDE10A phosphodiesterase 10A 0.0211657
EZR ezrin 0.021148
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0209943
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0178794
ARRDC3 arrestin domain containing 3 0.0175609
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0173191
RPL27A ribosomal protein L27a 0.0172634
ZFAND3 zinc finger, AN1-type domain 3 0.0165997
RPL31 ribosomal protein L31 0.015946
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.015772
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0132744
MBOAT2 membrane bound O-acyltransferase domain containing 2 0.0131059
PTMA prothymosin, alpha 0.0120673
ZNF292 zinc finger protein 292 0.0118365
SOX5 SRY (sex determining region Y)-box 5 0.0113574
SPAG9 sperm associated antigen 9 0.0106326
RPLP1 ribosomal protein, large, P1 0.0104622

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.36187
NDRG1 N-myc downstream regulated 1 -0.15831
EGFR epidermal growth factor receptor -0.152391
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.134495
MYOF myoferlin -0.132174
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.121702
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.109016
MACF1 microtubule-actin crosslinking factor 1 -0.104345
FN1 fibronectin 1 -0.102935
MYO1E myosin IE -0.101904
YAP1 Yes-associated protein 1 -0.0963077
HMGA2 high mobility group AT-hook 2 -0.0893753
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0883729
PRKCA protein kinase C, alpha -0.0868345
SLTM SAFB-like, transcription modulator -0.0862954
NAMPT nicotinamide phosphoribosyltransferase -0.0818127
FHIT fragile histidine triad -0.0801857
ARHGAP26 Rho GTPase activating protein 26 -0.0792985
EFNA5 ephrin-A5 -0.0787161
ALCAM activated leukocyte cell adhesion molecule -0.0784206
CANX calnexin -0.0770153
TRIO trio Rho guanine nucleotide exchange factor -0.0729556
TM9SF3 transmembrane 9 superfamily member 3 -0.0707382
CD44 CD44 molecule (Indian blood group) -0.0682415
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0682117
HDAC9 histone deacetylase 9 -0.0667931
MYO6 myosin VI -0.0661892
TMSB10 thymosin beta 10 -0.0655581
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0644381
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0614462
EIF1 eukaryotic translation initiation factor 1 -0.061384
PARD3 par-3 family cell polarity regulator -0.0570114
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0562711
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.053628
SND1 staphylococcal nuclease and tudor domain containing 1 -0.0524745
RPS13 ribosomal protein S13 -0.0501839
RAD51B RAD51 paralog B -0.050168
CUL3 cullin 3 -0.0496229
CHD9 chromodomain helicase DNA binding protein 9 -0.0478149
RUNX1 runt-related transcription factor 1 -0.0476496
LAMA4 laminin, alpha 4 -0.0464942
TPM4 tropomyosin 4 -0.0434865
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0404874
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0398057
FLNB filamin B, beta -0.0396174
MAP4 microtubule-associated protein 4 -0.0392067
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0380286
TNRC6B trinucleotide repeat containing 6B -0.0365454
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0346663
MCL1 myeloid cell leukemia 1 -0.0346594
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0337425
PIAS1 protein inhibitor of activated STAT, 1 -0.0332587
PRELID2 PRELI domain containing 2 -0.0331945
PICALM phosphatidylinositol binding clathrin assembly protein -0.0328055
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0320297
TTC3 tetratricopeptide repeat domain 3 -0.0320059
GLS2 glutaminase 2 (liver, mitochondrial) -0.0315284
KTN1 kinectin 1 (kinesin receptor) -0.0304759
PDE8A phosphodiesterase 8A -0.030291
EGR1 early growth response 1 -0.0295115
BIRC6 baculoviral IAP repeat containing 6 -0.0281109
RPL37 ribosomal protein L37 -0.0276092
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0275793
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0253134
RPS19 ribosomal protein S19 -0.024608
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0229335
RPS8 ribosomal protein S8 -0.0227774
FNIP1 folliculin interacting protein 1 -0.0218656
ASPH aspartate beta-hydroxylase -0.021857
DST dystonin -0.0203671
MYO10 myosin X -0.0192681
INHBA inhibin, beta A -0.0179411
RSF1 remodeling and spacing factor 1 -0.017871
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0178545
FBXO11 F-box protein 11 -0.0177115
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0176567
SAMD4A sterile alpha motif domain containing 4A -0.017538
LMO7 LIM domain 7 -0.0165156
BBX bobby sox homolog (Drosophila) -0.0156927
LIMCH1 LIM and calponin homology domains 1 -0.0154151
KMT2C lysine (K)-specific methyltransferase 2C -0.0150578
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0147789
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0147373
ANKRD12 ankyrin repeat domain 12 -0.0143809
SLIT2 slit homolog 2 (Drosophila) -0.0136515
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0133449
MAML3 mastermind-like 3 (Drosophila) -0.0127259
COPA coatomer protein complex, subunit alpha -0.0124092
RTN4 reticulon 4 -0.011983
YBX3 Y box binding protein 3 -0.0102475
TBC1D22A TBC1 domain family, member 22A -0.00986425
PDLIM5 PDZ and LIM domain 5 -0.0094736
ADNP activity-dependent neuroprotector homeobox -0.0079123
SEC31A SEC31 homolog A (S. cerevisiae) -0.00773801
GOLGA4 golgin A4 -0.007284
LPP LIM domain containing preferred translocation partner in lipoma -0.00652189
HLA-B major histocompatibility complex, class I, B -0.00643739
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 -0.00633336
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.00527621
LDHA lactate dehydrogenase A -0.0045476