Trifluridine_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Trifluridine perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Trifluridine_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.135325
CD44 CD44 molecule (Indian blood group) 0.0939787
BIRC3 baculoviral IAP repeat containing 3 0.0914433
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0798277
SMAD3 SMAD family member 3 0.0616553
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0600904
TXNRD1 thioredoxin reductase 1 0.0596625
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0571408
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0570759
YBX3 Y box binding protein 3 0.056651
RTN4 reticulon 4 0.0561334
FTH1 ferritin, heavy polypeptide 1 0.054411
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0540931
ITSN2 intersectin 2 0.0520062
CSNK1A1 casein kinase 1, alpha 1 0.0518458
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0512821
SQSTM1 sequestosome 1 0.0504593
ANKRD28 ankyrin repeat domain 28 0.0497372
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0494306
BAZ2B bromodomain adjacent to zinc finger domain, 2B 0.047468
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0467458
RIGI RNA sensor RIG-I 0.0463881
PKM pyruvate kinase, muscle 0.04543
ANGPTL4 angiopoietin-like 4 0.0444685
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0435681
DGKD diacylglycerol kinase, delta 130kDa 0.0412053
YAP1 Yes-associated protein 1 0.0405701
MT2A metallothionein 2A 0.0405153
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0401696
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.039912
VMP1 vacuole membrane protein 1 0.0383874
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB 0.038286
VEZT vezatin, adherens junctions transmembrane protein 0.0381869
SVIL supervillin 0.0380041
EIF2S2 eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa 0.0375271
WSB1 WD repeat and SOCS box containing 1 0.0374806
RNASEH2A ribonuclease H2, subunit A 0.0374212
FMNL2 formin-like 2 0.0370685
MATR3 matrin 3 0.0364789
RPS12 ribosomal protein S12 0.0363999
SEPTIN7 septin 7 0.0358532
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0343142
HILPDA hypoxia inducible lipid droplet-associated 0.0340596
ANO6 anoctamin 6 0.0338923
CWF19L2 CWF19-like 2, cell cycle control (S. pombe) 0.0335724
NAV3 neuron navigator 3 0.0329576
DIAPH1 diaphanous-related formin 1 0.0325942
CHD1 chromodomain helicase DNA binding protein 1 0.032427
JMJD1C jumonji domain containing 1C 0.0318528
ASXL1 additional sex combs like transcriptional regulator 1 0.0318506
IRAK2 interleukin-1 receptor-associated kinase 2 0.0316143
FNDC3B fibronectin type III domain containing 3B 0.0309938
NSD1 nuclear receptor binding SET domain protein 1 0.0309843
PPIG peptidylprolyl isomerase G (cyclophilin G) 0.0309535
HDAC9 histone deacetylase 9 0.0308167
FOSL1 FOS-like antigen 1 0.0303772
SLCO4A1 solute carrier organic anion transporter family, member 4A1 0.0303103
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0297566
MSN moesin 0.0294465
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0291685
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0291583
H3-3B H3.3 histone B 0.0289932
HDAC8 histone deacetylase 8 0.0289185
SLMAP sarcolemma associated protein 0.0288924
ANXA2 annexin A2 0.0288705
KTN1 kinectin 1 (kinesin receptor) 0.0286856
UGCG UDP-glucose ceramide glucosyltransferase 0.0286657
PLAUR plasminogen activator, urokinase receptor 0.0283687
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0282849
DGKH diacylglycerol kinase, eta 0.0282777
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0280936
SCAPER S-phase cyclin A-associated protein in the ER 0.027993
AKAP12 A kinase (PRKA) anchor protein 12 0.0277859
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0275244
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.0274114
EFNA5 ephrin-A5 0.0273516
PLCB4 phospholipase C, beta 4 0.0271554
CENPE centromere protein E, 312kDa 0.0271285
BCLAF1 BCL2-associated transcription factor 1 0.027071
FAM3C family with sequence similarity 3, member C 0.0265794
DENND4A DENN/MADD domain containing 4A 0.0265035
SET SET nuclear proto-oncogene 0.0263956
NAV2 neuron navigator 2 0.0263798
PRSS23 protease, serine, 23 0.0261487
TMEM87A transmembrane protein 87A 0.0261355
SRSF11 serine/arginine-rich splicing factor 11 0.0261007
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0259939
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0258611
STK24 serine/threonine kinase 24 0.0254437
ZNF292 zinc finger protein 292 0.0253643
MRE11 MRE11 homolog, double strand break repair nuclease 0.0253627
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0252214
PNISR PNN-interacting serine/arginine-rich protein 0.0252191
STK38L serine/threonine kinase 38 like 0.0251326
WDPCP WD repeat containing planar cell polarity effector 0.0250045
ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1 0.0249589
CXCL8 chemokine (C-X-C motif) ligand 8 0.0248599
MIB1 mindbomb E3 ubiquitin protein ligase 1 0.0247479
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0246053
MSH3 mutS homolog 3 0.0245457

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.359457
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.114104
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.100025
AHNAK AHNAK nucleoprotein -0.0939515
IGFBP3 insulin-like growth factor binding protein 3 -0.0787679
TPT1 tumor protein, translationally-controlled 1 -0.068296
PTMA prothymosin, alpha -0.0680239
INTS6 integrator complex subunit 6 -0.0553693
HMGA2 high mobility group AT-hook 2 -0.0552914
IARS1 isoleucyl-tRNA synthetase 1 -0.0526471
ATM ATM serine/threonine kinase -0.05043
CANX calnexin -0.049876
RALY RALY heterogeneous nuclear ribonucleoprotein -0.0475273
PRELID2 PRELI domain containing 2 -0.0465574
LOC112694756 uncharaterized LOC112694756 -0.0465478
DENND1A DENN/MADD domain containing 1A -0.0459968
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0441803
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0438008
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0430632
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0424271
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0412864
CALU calumenin -0.0407796
RNF213 ring finger protein 213 -0.0391247
RPL35A ribosomal protein L35a -0.0387649
ASPH aspartate beta-hydroxylase -0.0385341
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0359708
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0345799
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.033551
GOLGA3 golgin A3 -0.0333823
SPDYA speedy/RINGO cell cycle regulator family member A -0.0332902
PCNX4 pecanex 4 -0.0332737
HOOK2 hook microtubule-tethering protein 2 -0.0331512
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0329115
NUP98 nucleoporin 98kDa -0.0329007
CDH4 cadherin 4, type 1, R-cadherin (retinal) -0.0328265
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0324571
TM4SF1 transmembrane 4 L six family member 1 -0.032395
LCORL ligand dependent nuclear receptor corepressor-like -0.0318903
ERCC6L2 excision repair cross-complementation group 6-like 2 -0.031513
ZBTB20 zinc finger and BTB domain containing 20 -0.0314686
SNX14 sorting nexin 14 -0.031372
PRR16 proline rich 16 -0.0312929
GNAS GNAS complex locus -0.0311018
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0306793
FLNB filamin B, beta -0.0305717
FAM114A1 family with sequence similarity 114, member A1 -0.0305085
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0303816
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0302317
AEBP2 AE binding protein 2 -0.0299977
APOLD1 apolipoprotein L domain containing 1 -0.0298201
FMN1 formin 1 -0.0295514
RAB1A RAB1A, member RAS oncogene family -0.0291637
OSMR oncostatin M receptor -0.0290721
EIF1 eukaryotic translation initiation factor 1 -0.028806
JAZF1 JAZF zinc finger 1 -0.0286036
IER3 immediate early response 3 -0.0285183
DEK DEK proto-oncogene -0.0284219
SENP5 SUMO1/sentrin specific peptidase 5 -0.0284073
RPL32 ribosomal protein L32 -0.0280955
EEF2 eukaryotic translation elongation factor 2 -0.0279782
ARF1 ADP-ribosylation factor 1 -0.0277464
GOLGB1 golgin B1 -0.0277413
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0276907
UBC ubiquitin C -0.0275284
ACTG1 actin gamma 1 -0.0274999
RPS15 ribosomal protein S15 -0.0273916
CLIP1 CAP-GLY domain containing linker protein 1 -0.0273622
TAOK1 TAO kinase 1 -0.0273264
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0269496
PRKCA protein kinase C, alpha -0.026808
LPP LIM domain containing preferred translocation partner in lipoma -0.0266591
DOCK3 dedicator of cytokinesis 3 -0.0265996
ATG7 autophagy related 7 -0.0265744
CTTN cortactin -0.0259321
DNAH14 dynein, axonemal, heavy chain 14 -0.0258361
CCDC138 coiled-coil domain containing 138 -0.0257261
RIN2 Ras and Rab interactor 2 -0.025607
CLINT1 clathrin interactor 1 -0.0254238
GLRX glutaredoxin (thioltransferase) -0.0252271
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0251462
SCFD1 sec1 family domain containing 1 -0.0251038
RPS21 ribosomal protein S21 -0.0251035
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0250079
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0250069
NDRG1 N-myc downstream regulated 1 -0.02499
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0246759
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0245445
CCNH cyclin H -0.0245314
PYGL phosphorylase, glycogen, liver -0.0244736
TAS2R14 taste receptor, type 2, member 14 -0.0244304
NCOR1 nuclear receptor corepressor 1 -0.0240767
ZFYVE28 zinc finger, FYVE domain containing 28 -0.0237677
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0237332
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0235213
ANKMY1 ankyrin repeat and MYND domain containing 1 -0.0234086
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 -0.0233686
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0233637
USP53 ubiquitin specific peptidase 53 -0.023282
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 -0.0232387
ATXN1 ataxin 1 -0.0230103