Tubulin inhibitor 6_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tubulin inhibitor 6 perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tubulin inhibitor 6_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FRMD6 FERM domain containing 6 0.237194
HDAC9 histone deacetylase 9 0.159209
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.15273
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.093186
ACTG1 actin gamma 1 0.0931363
HMGA2 high mobility group AT-hook 2 0.0893298
NAV3 neuron navigator 3 0.0789508
ZNF438 zinc finger protein 438 0.0759667
ARHGAP22 Rho GTPase activating protein 22 0.0748725
NABP1 nucleic acid binding protein 1 0.0709013
EXT1 exostosin glycosyltransferase 1 0.0644322
SAMD4A sterile alpha motif domain containing 4A 0.0615441
FRMD4A FERM domain containing 4A 0.0608346
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0607636
RPS12 ribosomal protein S12 0.0603725
INTS6 integrator complex subunit 6 0.0603287
ZEB1 zinc finger E-box binding homeobox 1 0.0591363
ZSWIM6 zinc finger, SWIM-type containing 6 0.0517026
DGKI diacylglycerol kinase, iota 0.0506917
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0476801
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0468085
TPT1 tumor protein, translationally-controlled 1 0.0461299
FNIP1 folliculin interacting protein 1 0.0451198
WNT2B wingless-type MMTV integration site family, member 2B 0.0444941
RCOR1 REST corepressor 1 0.0435248
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0429024
RPS3 ribosomal protein S3 0.0415331
AGO2 argonaute RISC catalytic component 2 0.0405578
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0397304
SGMS2 sphingomyelin synthase 2 0.0383588
GPATCH2L G patch domain containing 2-like 0.0381045
NAV2 neuron navigator 2 0.037668
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0364701
IARS1 isoleucyl-tRNA synthetase 1 0.0357871
PTPRG protein tyrosine phosphatase, receptor type, G 0.0342987
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0342716
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 0.0338678
SND1 staphylococcal nuclease and tudor domain containing 1 0.0338677
RAD51B RAD51 paralog B 0.0323338
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0320052
FKBP15 FK506 binding protein 15, 133kDa 0.0300967
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0295864
MAPKAP1 mitogen-activated protein kinase associated protein 1 0.0295093
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0294401
PBX3 pre-B-cell leukemia homeobox 3 0.0294387
GOLGA2 golgin A2 0.028848
BPTF bromodomain PHD finger transcription factor 0.0287308
RPL35A ribosomal protein L35a 0.02856
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0284007
EXOC4 exocyst complex component 4 0.0281742
JMJD1C jumonji domain containing 1C 0.0273487
LARP4B La ribonucleoprotein domain family, member 4B 0.0272184
HM13 histocompatibility (minor) 13 0.0263798
PCNX4 pecanex 4 0.026208
MCTP1 multiple C2 domains, transmembrane 1 0.0262047
VPS13B vacuolar protein sorting 13 homolog B (yeast) 0.0260555
GDI2 GDP dissociation inhibitor 2 0.0259432
AKAP9 A kinase (PRKA) anchor protein 9 0.0256483
CAPRIN2 caprin family member 2 0.0253775
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0250215
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0245102
CAST calpastatin 0.0242513
SP100 SP100 nuclear antigen 0.0241958
GOLGB1 golgin B1 0.0241021
ANKRD17 ankyrin repeat domain 17 0.0239954
SMYD3 SET and MYND domain containing 3 0.0238786
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0237488
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0236596
AEBP2 AE binding protein 2 0.0228299
RAB7A RAB7A, member RAS oncogene family 0.0221624
SETX senataxin 0.0214993
FNDC3B fibronectin type III domain containing 3B 0.0214457
SEC24D SEC24 family member D 0.0211645
DDR2 discoidin domain receptor tyrosine kinase 2 0.0210899
UBAP2 ubiquitin associated protein 2 0.0210001
TMED3 transmembrane emp24 protein transport domain containing 3 0.0208999
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0208912
SCFD1 sec1 family domain containing 1 0.0208589
MTHFD2L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like 0.0208494
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0205367
DENND1A DENN/MADD domain containing 1A 0.0204559
SQSTM1 sequestosome 1 0.020344
PGM3 phosphoglucomutase 3 0.0201629
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0200443
RPL13A ribosomal protein L13a 0.0197814
GOSR2 golgi SNAP receptor complex member 2 0.0196816
CLIP1 CAP-GLY domain containing linker protein 1 0.0196749
RPL26 ribosomal protein L26 0.0196347
MSH4 mutS homolog 4 0.0195595
RALY RALY heterogeneous nuclear ribonucleoprotein 0.0195188
N4BP2L2 NEDD4 binding protein 2-like 2 0.01949
EIF4B eukaryotic translation initiation factor 4B 0.0194853
PMM2 phosphomannomutase 2 0.0194403
ZCCHC7 zinc finger, CCHC domain containing 7 0.0193446
TAS2R14 taste receptor, type 2, member 14 0.019236
CMIP c-Maf inducing protein 0.0192089
PUM3 pumilio RNA binding family member 3 0.0190319
FHIT fragile histidine triad 0.0187768
TRIP12 thyroid hormone receptor interactor 12 0.0187473
EPC2 enhancer of polycomb homolog 2 (Drosophila) 0.0187456

decreased expression

Symbol Name Standardized Value
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.156657
MT2A metallothionein 2A -0.122298
UBC ubiquitin C -0.113382
TMSB10 thymosin beta 10 -0.105396
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.095955
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0927723
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.084518
TXNRD1 thioredoxin reductase 1 -0.0725827
EEF2 eukaryotic translation elongation factor 2 -0.0686482
JUN jun proto-oncogene -0.0666809
HMGA1 high mobility group AT-hook 1 -0.0653888
RPL8 ribosomal protein L8 -0.064835
PKM pyruvate kinase, muscle -0.0633268
STC1 stanniocalcin 1 -0.0608756
UPP1 uridine phosphorylase 1 -0.0603855
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0587317
RPS27A ribosomal protein S27a -0.0540041
ELL2 elongation factor, RNA polymerase II, 2 -0.0519088
RPLP1 ribosomal protein, large, P1 -0.0500344
PTMA prothymosin, alpha -0.049026
AHNAK AHNAK nucleoprotein -0.0478887
PRRC2C proline-rich coiled-coil 2C -0.0478863
FTL ferritin, light polypeptide -0.0473889
RPL23 ribosomal protein L23 -0.0467506
PTK2 protein tyrosine kinase 2 -0.0464048
LOC112694756 uncharaterized LOC112694756 -0.0453346
RTN4 reticulon 4 -0.0450969
USP3 ubiquitin specific peptidase 3 -0.0442741
RPL32 ribosomal protein L32 -0.043471
TOP1 topoisomerase (DNA) I -0.0424996
TPD52 tumor protein D52 -0.0424738
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0402672
PDIA3 protein disulfide isomerase family A, member 3 -0.0399525
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0396551
PFN1 profilin 1 -0.0390104
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0386867
RPS19 ribosomal protein S19 -0.0382938
NAMPT nicotinamide phosphoribosyltransferase -0.0380369
CAPN2 calpain 2, (m/II) large subunit -0.0371434
C2CD2 C2 calcium-dependent domain containing 2 -0.0370713
KDM3A lysine (K)-specific demethylase 3A -0.0356092
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0354052
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0352918
FOSL1 FOS-like antigen 1 -0.0352078
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0345816
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.034578
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0341689
RPS21 ribosomal protein S21 -0.0338215
CD44 CD44 molecule (Indian blood group) -0.0336829
RPS6 ribosomal protein S6 -0.0330636
PGK1 phosphoglycerate kinase 1 -0.0324947
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0322006
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0321876
RBM25 RNA binding motif protein 25 -0.031593
MATR3 matrin 3 -0.0313306
RAD21 RAD21 homolog (S. pombe) -0.0310945
ENO1 enolase 1, (alpha) -0.0302406
PHIP pleckstrin homology domain interacting protein -0.0295267
S100A9 S100 calcium binding protein A9 -0.0290987
TRIO trio Rho guanine nucleotide exchange factor -0.0288263
ATAD2 ATPase family, AAA domain containing 2 -0.0285958
FOXO3 forkhead box O3 -0.028213
RPS24 ribosomal protein S24 -0.0281753
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0281468
RPS5 ribosomal protein S5 -0.0279061
RBM39 RNA binding motif protein 39 -0.0276509
ANTXR2 anthrax toxin receptor 2 -0.0275876
FLNB filamin B, beta -0.0271236
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0269746
SNX9 sorting nexin 9 -0.0268353
SRPK2 SRSF protein kinase 2 -0.0267625
KMT2C lysine (K)-specific methyltransferase 2C -0.0264954
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0263244
PNISR PNN-interacting serine/arginine-rich protein -0.0262971
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0262408
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0260793
NOP58 NOP58 ribonucleoprotein -0.026058
TPX2 TPX2, microtubule-associated -0.0260393
GNAS GNAS complex locus -0.0258611
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0257536
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0257375
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0256441
FHL2 four and a half LIM domains 2 -0.0255216
G0S2 G0/G1 switch 2 -0.0255081
LAMB3 laminin, beta 3 -0.0255
UBE2K ubiquitin-conjugating enzyme E2K -0.0254341
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0254337
LDHB lactate dehydrogenase B -0.0252697
ZNF292 zinc finger protein 292 -0.0252473
RNF145 ring finger protein 145 -0.0249905
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme -0.0246109
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) -0.0245253
XPO1 exportin 1 -0.0244814
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.024187
TPM4 tropomyosin 4 -0.0240853
TMEM123 transmembrane protein 123 -0.0239378
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0238461
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0236384
PALM2AKAP2 PALM2 and AKAP2 fusion -0.023628
NIPBL Nipped-B homolog (Drosophila) -0.023532