Tucidinostat_NCI-H1792 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Tucidinostat perturbation in NCI-H1792 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Tucidinostat_NCI-H1792 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GRB10 growth factor receptor-bound protein 10 0.0788592
IGFBP3 insulin-like growth factor binding protein 3 0.0655535
FN1 fibronectin 1 0.0620102
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0567831
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0554855
NRG1 neuregulin 1 0.0498137
CXCL8 chemokine (C-X-C motif) ligand 8 0.0426284
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.0419478
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.037809
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0334938
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0325513
HMGA2 high mobility group AT-hook 2 0.0310059
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0304404
FAM20C family with sequence similarity 20, member C 0.0278168
DOCK5 dedicator of cytokinesis 5 0.0253679
LRMDA leucine rich melanocyte differentiation associated 0.0242084
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0240497
COL7A1 collagen, type VII, alpha 1 0.0233655
INTS6 integrator complex subunit 6 0.0231857
SYT1 synaptotagmin I 0.0225227
WLS wntless Wnt ligand secretion mediator 0.0221311
MAML3 mastermind-like 3 (Drosophila) 0.0220389
AUTS2 autism susceptibility candidate 2 0.0212374
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 0.0201205
NEBL nebulette 0.0189959
LOXL2 lysyl oxidase-like 2 0.0185786
ZSWIM6 zinc finger, SWIM-type containing 6 0.0183891
AADAC arylacetamide deacetylase 0.0179308
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 0.0178917
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0176059
MEF2A myocyte enhancer factor 2A 0.017536
PSD3 pleckstrin and Sec7 domain containing 3 0.0175279
PTPRB protein tyrosine phosphatase, receptor type, B 0.0172223
RHCG Rh family, C glycoprotein 0.0172116
CCSER1 coiled-coil serine-rich protein 1 0.0170747
EFCAB13 EF-hand calcium binding domain 13 0.0166143
FTH1 ferritin, heavy polypeptide 1 0.0164128
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0159415
ATXN1 ataxin 1 0.0154262
NFATC2 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 0.0152436
PLIN2 perilipin 2 0.0151959
MTSS1 metastasis suppressor 1 0.0146403
FBN1 fibrillin 1 0.0144105
SLC44A5 solute carrier family 44, member 5 0.0139427
BHLHE40 basic helix-loop-helix family, member e40 0.0138158
CDK14 cyclin-dependent kinase 14 0.0136143
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0136006
FLRT2 fibronectin leucine rich transmembrane protein 2 0.0135868
GLIS3 GLIS family zinc finger 3 0.0134514
TNS1 tensin 1 0.0132058
MSRB3 methionine sulfoxide reductase B3 0.0131391
ERRFI1 ERBB receptor feedback inhibitor 1 0.0130698
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0130109
TPST1 tyrosylprotein sulfotransferase 1 0.0129722
TGFB1 transforming growth factor, beta 1 0.0127548
ZFYVE28 zinc finger, FYVE domain containing 28 0.0126019
NAV1 neuron navigator 1 0.0124524
GRIK5 glutamate receptor, ionotropic, kainate 5 0.0123412
HMCN1 hemicentin 1 0.0121437
H1-0 H1.0 linker histone 0.0120432
GREB1L growth regulation by estrogen in breast cancer-like 0.0120045
ANGPTL4 angiopoietin-like 4 0.0119136
RIMS2 regulating synaptic membrane exocytosis 2 0.0118172
NCOR2 nuclear receptor corepressor 2 0.0116656
TMTC1 transmembrane and tetratricopeptide repeat containing 1 0.0116023
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0114423
CNIH3 cornichon family AMPA receptor auxiliary protein 3 0.0114321
HDAC4 histone deacetylase 4 0.0113979
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0113335
AVIL advillin 0.0113271
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0112891
FAM219A family with sequence similarity 219, member A 0.0112851
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0112738
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0112106
MECOM MDS1 and EVI1 complex locus 0.0110209
CDH13 cadherin 13 0.0109851
DST dystonin 0.0108898
SKIL SKI-like proto-oncogene 0.0108875
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0108408
PDGFB platelet-derived growth factor beta polypeptide 0.0107484
COL8A1 collagen, type VIII, alpha 1 0.0102636
POU6F2 POU class 6 homeobox 2 0.0102298
PALLD palladin, cytoskeletal associated protein 0.0101965
BICC1 BicC family RNA binding protein 1 0.0101239
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0100702
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0100511
SLIT2 slit homolog 2 (Drosophila) 0.00997529
THRB thyroid hormone receptor, beta 0.00987537
CA12 carbonic anhydrase XII 0.00985997
SVIL supervillin 0.009825
RPL4 ribosomal protein L4 0.00966131
PCNX2 pecanex 2 0.00962914
TIMP3 TIMP metallopeptidase inhibitor 3 0.00957539
DOCK3 dedicator of cytokinesis 3 0.00947507
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.00946611
ZNF804A zinc finger protein 804A 0.00942588
PCSK5 proprotein convertase subtilisin/kexin type 5 0.00941133
CLMN calmin (calponin-like, transmembrane) 0.00933828
FRMD6 FERM domain containing 6 0.0093293
GABRE gamma-aminobutyric acid (GABA) A receptor, epsilon 0.0093105

decreased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase -0.182181
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.148969
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.148673
TMSB10 thymosin beta 10 -0.129915
GOLGA4 golgin A4 -0.102979
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0965246
VIM vimentin -0.091554
RBM39 RNA binding motif protein 39 -0.0866504
USP34 ubiquitin specific peptidase 34 -0.0856721
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0840111
KDM2A lysine (K)-specific demethylase 2A -0.0823166
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0768409
FTL ferritin, light polypeptide -0.0753512
PTMA prothymosin, alpha -0.0707331
MT2A metallothionein 2A -0.0695562
ELL2 elongation factor, RNA polymerase II, 2 -0.0669461
PCBP2 poly(rC) binding protein 2 -0.0661488
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0582024
EIF1 eukaryotic translation initiation factor 1 -0.0578487
PRRC2C proline-rich coiled-coil 2C -0.0574086
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0554382
KDM3A lysine (K)-specific demethylase 3A -0.0520004
KMT2C lysine (K)-specific methyltransferase 2C -0.0496546
LMAN1 lectin, mannose-binding, 1 -0.0494437
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0493542
OGA O-GlcNAcase -0.0478919
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0465521
FNDC3B fibronectin type III domain containing 3B -0.0451639
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0448123
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0424011
OSMR oncostatin M receptor -0.0419168
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0418462
NPC1 Niemann-Pick disease, type C1 -0.0417944
AKAP9 A kinase (PRKA) anchor protein 9 -0.0408163
PDIA3 protein disulfide isomerase family A, member 3 -0.0406624
CD44 CD44 molecule (Indian blood group) -0.040426
NIPBL Nipped-B homolog (Drosophila) -0.0402283
B2M beta-2-microglobulin -0.0394586
SPAG9 sperm associated antigen 9 -0.039097
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0387391
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0381104
RPLP1 ribosomal protein, large, P1 -0.0380258
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.037957
ARHGAP5 Rho GTPase activating protein 5 -0.0374425
NRP1 neuropilin 1 -0.0368662
SMAD3 SMAD family member 3 -0.0368087
CANX calnexin -0.035793
RPS19 ribosomal protein S19 -0.0354097
SBF2 SET binding factor 2 -0.0353783
ZNF292 zinc finger protein 292 -0.035346
RPS21 ribosomal protein S21 -0.0351555
C15ORF48 chromosome 15 open reading frame 48 -0.0351102
PARD3 par-3 family cell polarity regulator -0.0348145
COG5 component of oligomeric golgi complex 5 -0.0347921
ITCH itchy E3 ubiquitin protein ligase -0.034588
TFPI2 tissue factor pathway inhibitor 2 -0.0341937
TPT1 tumor protein, translationally-controlled 1 -0.0336274
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0332847
KIF5B kinesin family member 5B -0.0327584
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0327441
RAP1B RAP1B, member of RAS oncogene family -0.0326424
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0326401
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0319218
BIRC6 baculoviral IAP repeat containing 6 -0.0314331
NF1 neurofibromin 1 -0.0313289
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0310747
WSB1 WD repeat and SOCS box containing 1 -0.0306278
PCNX1 pecanex 1 -0.0305975
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0303128
XPO1 exportin 1 -0.0301243
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 -0.0300505
RB1CC1 RB1-inducible coiled-coil 1 -0.0300181
RIOK3 RIO kinase 3 -0.0300174
AKAP13 A kinase (PRKA) anchor protein 13 -0.0298956
GLG1 golgi glycoprotein 1 -0.0298585
ATP13A3 ATPase type 13A3 -0.0298341
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0297479
CNOT2 CCR4-NOT transcription complex, subunit 2 -0.0295461
CLTC clathrin, heavy chain (Hc) -0.0294868
EEF2 eukaryotic translation elongation factor 2 -0.0293954
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 -0.0291918
MARCHF6 membrane associated ring-CH-type finger 6 -0.0290859
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0289228
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0288925
CALR calreticulin -0.0288353
BASP1 brain abundant, membrane attached signal protein 1 -0.0287874
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0287514
WDR45B WD repeat domain 45B -0.0285902
JMJD1C jumonji domain containing 1C -0.0285677
WAC WW domain containing adaptor with coiled-coil -0.02851
TM4SF1 transmembrane 4 L six family member 1 -0.0284768
ZMYND8 zinc finger, MYND-type containing 8 -0.0284681
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.028393
NBAS neuroblastoma amplified sequence -0.0283774
KTN1 kinectin 1 (kinesin receptor) -0.0281767
RBM25 RNA binding motif protein 25 -0.0281306
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0280554
TXNRD1 thioredoxin reductase 1 -0.0280019
RAB1A RAB1A, member RAS oncogene family -0.0279558
RPL35A ribosomal protein L35a -0.0279535