U-118-MG Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description Human neuronal glioblastoma (grade III) cell line. (BRENDA Tissue and Enzyme Source Ontology, BTO_0004605)
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Genes

54 genes with high or low copy number in U-118-MG relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value

low copy number

Symbol Name Standardized Value
MIR3612 microRNA 3612 -3.24687
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase -3.24687
GOPC golgi-associated PDZ and coiled-coil motif containing -3.24687
DCBLD1 discoidin, CUB and LCCL domain containing 1 -3.24687
CRYZ crystallin, zeta (quinone reductase) -3.14331
TYW3 tRNA-yW synthesizing protein 3 homolog (S. cerevisiae) -3.14331
TNNI3K TNNI3 interacting kinase -3.14331
FPGT-TNNI3K FPGT-TNNI3K readthrough -3.06578
LRRIQ3 leucine-rich repeats and IQ motif containing 3 -3.06578
FPGT fucose-1-phosphate guanylyltransferase -3.06578
OR52N5 olfactory receptor, family 52, subfamily N, member 5 -2.84224
MIR876 microRNA 876 -2.84034
MIR873 microRNA 873 -2.83605
C9ORF72 chromosome 9 open reading frame 72 -2.83538
IFNK interferon, kappa -2.83538
EQTN equatorin, sperm acrosome associated -2.83167
MOB3B MOB kinase activator 3B -2.83114
LINC00032 long intergenic non-protein coding RNA 32 -2.82909
MIR4473 microRNA 4473 -2.82708
LRRC19 leucine rich repeat containing 19 -2.82668
CAAP1 caspase activity and apoptosis inhibitor 1 -2.82318
TEK TEK tyrosine kinase, endothelial -2.82318
PLAA phospholipase A2-activating protein -2.82318
IFT74 intraflagellar transport 74 -2.82083
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 -2.81841
MIR4474 microRNA 4474 -2.81559
MIR491 microRNA 491 -2.80395
SNORA30 small nucleolar RNA, H/ACA box 30 -2.79995
LINGO2 leucine rich repeat and Ig domain containing 2 -2.79933
LOC100506422 putative deoxyuridine 5'-triphosphate nucleotidohydrolase-like protein FLJ16323 -2.79871
TUSC1 tumor suppressor candidate 1 -2.78941
FOCAD focadhesin -2.7828
HACD4 3-hydroxyacyl-CoA dehydratase 4 -2.78237
IFNB1 interferon, beta 1, fibroblast -2.77588
IFNW1 interferon, omega 1 -2.77446
IZUMO3 IZUMO family member 3 -2.77409
IFNA21 interferon, alpha 21 -2.77074
IFNA4 interferon, alpha 4 -2.7694
IFNA16 interferon, alpha 16 -2.76453
IFNA17 interferon, alpha 17 -2.76453
IFNA14 interferon, alpha 14 -2.75972
IFNA10 interferon, alpha 10 -2.75972
IFNA7 interferon, alpha 7 -2.75972
IFNA22P interferon, alpha 22, pseudogene -2.75555
IFNA5 interferon, alpha 5 -2.74973
KLHL9 kelch-like family member 9 -2.74526
ELAVL2 ELAV like neuron-specific RNA binding protein 2 -2.74526
IFNA6 interferon, alpha 6 -2.74032
IFNA13 interferon, alpha 13 -2.73798
IFNA2 interferon, alpha 2 -2.73608
OR52N1 olfactory receptor, family 52, subfamily N, member 1 -2.73524
IFNA8 interferon, alpha 8 -2.73024
IFNA1 interferon, alpha 1 -2.72828
IFNE interferon, epsilon -2.72466