ULK-101_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ULK-101 perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ULK-101_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0879919
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0767753
AREG amphiregulin 0.062007
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0569654
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0479267
VMP1 vacuole membrane protein 1 0.0438539
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0435384
INTS6 integrator complex subunit 6 0.0419306
RAB7A RAB7A, member RAS oncogene family 0.0390172
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0355068
ERRFI1 ERBB receptor feedback inhibitor 1 0.0346376
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0343218
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0340168
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0314974
ZSWIM6 zinc finger, SWIM-type containing 6 0.0314277
CSNK1A1 casein kinase 1, alpha 1 0.0312077
BIRC3 baculoviral IAP repeat containing 3 0.0310748
EIF1 eukaryotic translation initiation factor 1 0.0306539
IPO7 importin 7 0.0304796
EGR1 early growth response 1 0.030391
TXNRD1 thioredoxin reductase 1 0.0302079
DENND5A DENN/MADD domain containing 5A 0.0300094
JMJD1C jumonji domain containing 1C 0.030009
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0293215
ASPH aspartate beta-hydroxylase 0.0292839
YAP1 Yes-associated protein 1 0.0290513
ADIPOR2 adiponectin receptor 2 0.028111
PTGES3 prostaglandin E synthase 3 (cytosolic) 0.0280529
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0258833
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.025737
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0250763
RRM2 ribonucleotide reductase M2 0.0244313
FTL ferritin, light polypeptide 0.0243373
PCBP2 poly(rC) binding protein 2 0.0241097
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0235665
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 0.0235326
RPL7 ribosomal protein L7 0.0235204
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0231817
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0228233
LRRC23 leucine rich repeat containing 23 0.0228098
YBX1 Y box binding protein 1 0.0216711
APLP2 amyloid beta (A4) precursor-like protein 2 0.0211695
MBD5 methyl-CpG binding domain protein 5 0.0207928
CAMKMT calmodulin-lysine N-methyltransferase 0.0206568
EIF4A2 eukaryotic translation initiation factor 4A2 0.0205351
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0196806
SQSTM1 sequestosome 1 0.0195282
USP9X ubiquitin specific peptidase 9, X-linked 0.0193532
C6ORF62 chromosome 6 open reading frame 62 0.0192282
VIM vimentin 0.0189503
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0188682
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0188433
OSBPL8 oxysterol binding protein-like 8 0.0187053
RPLP0 ribosomal protein, large, P0 0.018703
RCOR1 REST corepressor 1 0.0185361
RACK1 receptor for activated C kinase 1 0.0183921
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma) 0.0183443
ERBIN erbb2 interacting protein 0.0183147
AKAP9 A kinase (PRKA) anchor protein 9 0.0181163
HOMER1 homer scaffolding protein 1 0.0178833
ZEB1 zinc finger E-box binding homeobox 1 0.0178158
HMGA2 high mobility group AT-hook 2 0.0175124
GPBP1 GC-rich promoter binding protein 1 0.0173167
TAOK1 TAO kinase 1 0.0172189
ANKRD17 ankyrin repeat domain 17 0.0171371
PHC3 polyhomeotic homolog 3 (Drosophila) 0.0169269
CAMK2D calcium/calmodulin-dependent protein kinase II delta 0.0168253
MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3 0.0167393
AP3S1 adaptor-related protein complex 3, sigma 1 subunit 0.0167162
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0165706
TNRC6B trinucleotide repeat containing 6B 0.016567
PGK1 phosphoglycerate kinase 1 0.0161342
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0161111
MED13 mediator complex subunit 13 0.0161061
ZFAND3 zinc finger, AN1-type domain 3 0.0159192
UBC ubiquitin C 0.0158779
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0157985
RB1CC1 RB1-inducible coiled-coil 1 0.0157411
VPS8 vacuolar protein sorting 8 homolog (S. cerevisiae) 0.0155511
EEF2 eukaryotic translation elongation factor 2 0.0153128
SCFD1 sec1 family domain containing 1 0.0150097
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.0148667
INTS4 integrator complex subunit 4 0.0148037
ABI2 abl-interactor 2 0.0143674
FXR1 fragile X mental retardation, autosomal homolog 1 0.0143634
USP15 ubiquitin specific peptidase 15 0.0143001
USP47 ubiquitin specific peptidase 47 0.0142284
AGO3 argonaute RISC catalytic component 3 0.014173
MAP3K13 mitogen-activated protein kinase kinase kinase 13 0.0141111
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.014105
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.014067
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0140044
NEK7 NIMA-related kinase 7 0.0139972
SPDYA speedy/RINGO cell cycle regulator family member A 0.0139194
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0139116
RPL32 ribosomal protein L32 0.0139073
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0137991
SERINC1 serine incorporator 1 0.0137695
RLF rearranged L-myc fusion 0.0137479
TEX14 testis expressed 14 0.013679

decreased expression

Symbol Name Standardized Value
NLGN1 neuroligin 1 -0.185949
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0772438
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 -0.0604484
PTMA prothymosin, alpha -0.058374
ANKRD12 ankyrin repeat domain 12 -0.0574863
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0565828
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0553561
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0519566
TMSB10 thymosin beta 10 -0.0518396
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0439945
CELF2 CUGBP, Elav-like family member 2 -0.0438081
MKI67 marker of proliferation Ki-67 -0.0413839
MYL12B myosin, light chain 12B, regulatory -0.0402577
DST dystonin -0.0395017
DLC1 DLC1 Rho GTPase activating protein -0.0380287
TENM3 teneurin transmembrane protein 3 -0.0377371
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0373215
NR5A2 nuclear receptor subfamily 5, group A, member 2 -0.0362433
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0330781
SMC4 structural maintenance of chromosomes 4 -0.0330565
CENPF centromere protein F, 350/400kDa -0.0327391
NEBL nebulette -0.0317587
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0316538
MMP12 matrix metallopeptidase 12 -0.0312301
CNRIP1 cannabinoid receptor interacting protein 1 -0.0310047
ANKRD28 ankyrin repeat domain 28 -0.0309497
SNCA synuclein, alpha (non A4 component of amyloid precursor) -0.0308609
DPYD dihydropyrimidine dehydrogenase -0.0302736
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0301596
LARP1 La ribonucleoprotein domain family, member 1 -0.0294835
NHSL1 NHS-like 1 -0.0285957
RPL35A ribosomal protein L35a -0.0283067
NAP1L1 nucleosome assembly protein 1-like 1 -0.0273653
PCDH7 protocadherin 7 -0.0272737
RPL37A ribosomal protein L37a -0.0268075
SYT1 synaptotagmin I -0.0266125
KIF18B kinesin family member 18B -0.0263756
CCND1 cyclin D1 -0.0262001
BCHE butyrylcholinesterase -0.0261714
TMEM41B transmembrane protein 41B -0.0258417
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0256599
PDE4D phosphodiesterase 4D, cAMP-specific -0.0252495
CLPTM1L CLPTM1-like -0.0252488
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1 -0.0248388
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.024102
MAP1B microtubule-associated protein 1B -0.0240572
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.023814
IFIH1 interferon induced with helicase C domain 1 -0.0237071
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0236768
CMIP c-Maf inducing protein -0.0234648
KPNB1 karyopherin (importin) beta 1 -0.0234279
PTMS parathymosin -0.0228792
PDGFC platelet derived growth factor C -0.0225306
TGM2 transglutaminase 2 -0.0223201
PRR11 proline rich 11 -0.0217089
ATP5F1B ATP synthase F1 subunit beta -0.0216687
CLDN1 claudin 1 -0.0216056
LMO7 LIM domain 7 -0.0209419
P3H2 prolyl 3-hydroxylase 2 -0.0205874
CENPE centromere protein E, 312kDa -0.0202012
TPT1 tumor protein, translationally-controlled 1 -0.0201677
AXIN2 axin 2 -0.0199568
FSTL5 follistatin-like 5 -0.0199009
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0195088
CALR calreticulin -0.0193513
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0190948
ZNF804A zinc finger protein 804A -0.0189144
HMGA1 high mobility group AT-hook 1 -0.0187102
EHBP1 EH domain binding protein 1 -0.0187092
EIF5B eukaryotic translation initiation factor 5B -0.018658
HLTF helicase-like transcription factor -0.0184372
CDK6 cyclin-dependent kinase 6 -0.0181395
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) -0.0178983
TMEM131 transmembrane protein 131 -0.0177574
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0176013
TUBB tubulin, beta class I -0.0175187
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0174138
CCN2 cellular communication network factor 2 -0.017348
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.017136
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0168751
TWSG1 twisted gastrulation BMP signaling modulator 1 -0.0168059
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1 -0.0167863
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.016771
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0167596
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) -0.0166101
XPO1 exportin 1 -0.0165914
ANXA1 annexin A1 -0.0165585
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.0165276
AKAP12 A kinase (PRKA) anchor protein 12 -0.0165124
GCG glucagon -0.0165124
ATP9A ATPase, class II, type 9A -0.0163888
NCAPD2 non-SMC condensin I complex, subunit D2 -0.0162388
RPS21 ribosomal protein S21 -0.0161998
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0161761
ANKRD11 ankyrin repeat domain 11 -0.0161622
TPR translocated promoter region, nuclear basket protein -0.0160501
AFG3L2 AFG3-like AAA ATPase 2 -0.0159211
THSD7A thrombospondin, type I, domain containing 7A -0.0158731
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0156593
SMC3 structural maintenance of chromosomes 3 -0.0155668