ULK-101_H4 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ULK-101 perturbation in H4 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ULK-101_H4 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0933981
STC1 stanniocalcin 1 0.0894154
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0808234
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0612852
FNDC3B fibronectin type III domain containing 3B 0.055578
NDRG1 N-myc downstream regulated 1 0.0545683
BACE2 beta-site APP-cleaving enzyme 2 0.0541819
AKAP12 A kinase (PRKA) anchor protein 12 0.052527
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0471406
ZSWIM6 zinc finger, SWIM-type containing 6 0.0439703
HMGA2 high mobility group AT-hook 2 0.0367761
EGFR epidermal growth factor receptor 0.0352373
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0346637
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0339851
ELL2 elongation factor, RNA polymerase II, 2 0.0319778
DTNA dystrobrevin, alpha 0.0318926
SMAD3 SMAD family member 3 0.0318701
FAM13A family with sequence similarity 13, member A 0.0315821
HELZ helicase with zinc finger 0.0308875
ZNF638 zinc finger protein 638 0.0304897
ERRFI1 ERBB receptor feedback inhibitor 1 0.0288468
JARID2 jumonji, AT rich interactive domain 2 0.0277452
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0266545
EGR1 early growth response 1 0.0262247
LOC112694756 uncharaterized LOC112694756 0.0255984
SRP54 signal recognition particle 54kDa 0.0244616
AKAP9 A kinase (PRKA) anchor protein 9 0.0243661
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0241754
NAMPT nicotinamide phosphoribosyltransferase 0.0240663
GOLGA4 golgin A4 0.0237195
C1S complement component 1, s subcomponent 0.023565
COPB1 coatomer protein complex, subunit beta 1 0.0223603
MCTP1 multiple C2 domains, transmembrane 1 0.0222826
PRELID2 PRELI domain containing 2 0.0222348
SFTPA2 surfactant protein A2 0.0221979
ZNF841 zinc finger protein 841 0.0219983
KYNU kynureninase 0.021893
ASPH aspartate beta-hydroxylase 0.0210796
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog 0.0210617
GLS2 glutaminase 2 (liver, mitochondrial) 0.0210576
ZNF395 zinc finger protein 395 0.020917
GLIS3 GLIS family zinc finger 3 0.0206827
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0206444
JMJD1C jumonji domain containing 1C 0.0205774
TRA2A transformer 2 alpha homolog (Drosophila) 0.0203313
DSCAM Down syndrome cell adhesion molecule 0.0200662
SEC24A SEC24 family member A 0.0197332
TRIO trio Rho guanine nucleotide exchange factor 0.0196726
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0195581
ARFGEF3 ARFGEF family member 3 0.0192839
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0191578
MACF1 microtubule-actin crosslinking factor 1 0.019143
RASA2 RAS p21 protein activator 2 0.0186628
MAST4 microtubule associated serine/threonine kinase family member 4 0.0183267
CLEC1B C-type lectin domain family 1, member B 0.0181088
SUCO SUN domain containing ossification factor 0.01807
PGM3 phosphoglucomutase 3 0.0178094
PLIN2 perilipin 2 0.0177965
EEF2 eukaryotic translation elongation factor 2 0.017637
GOLGB1 golgin B1 0.0176243
CEMIP cell migration inducing protein, hyaluronan binding 0.017511
SQSTM1 sequestosome 1 0.0174593
CALN1 calneuron 1 0.0173974
NGLY1 N-glycanase 1 0.017216
RUNX1 runt-related transcription factor 1 0.0172076
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0171874
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0171815
KMT2E lysine (K)-specific methyltransferase 2E 0.017157
PNRC1 proline-rich nuclear receptor coactivator 1 0.0169701
UBAP2 ubiquitin associated protein 2 0.0169688
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0169387
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0168654
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0167614
ITGB3BP integrin beta 3 binding protein (beta3-endonexin) 0.0166301
ELP2 elongator acetyltransferase complex subunit 2 0.0165719
ANXA5 annexin A5 0.0164963
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0162175
GYS1 glycogen synthase 1 (muscle) 0.0161287
HDAC9 histone deacetylase 9 0.0161062
NCOA7 nuclear receptor coactivator 7 0.0156481
GPHN gephyrin 0.0155591
SLC39A11 solute carrier family 39, member 11 0.0154964
LIMCH1 LIM and calponin homology domains 1 0.0153943
METTL15 methyltransferase like 15 0.0153796
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor) 0.0152466
ZNF160 zinc finger protein 160 0.0152308
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.0151632
XKR6 XK, Kell blood group complex subunit-related family, member 6 0.0151206
SEC31A SEC31 homolog A (S. cerevisiae) 0.0151158
TAF4B TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa 0.0149921
DGKD diacylglycerol kinase, delta 130kDa 0.0149094
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0148193
USP9Y ubiquitin specific peptidase 9, Y-linked 0.0147877
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0146999
SNX14 sorting nexin 14 0.0146811
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0145466
ARRDC3 arrestin domain containing 3 0.014546
ANO6 anoctamin 6 0.0144965
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0142423
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0140943

decreased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 -0.138042
TMSB10 thymosin beta 10 -0.123413
IGFBP3 insulin-like growth factor binding protein 3 -0.114387
FN1 fibronectin 1 -0.113378
PTMA prothymosin, alpha -0.0825297
TPM4 tropomyosin 4 -0.0751671
TGFBI transforming growth factor, beta-induced, 68kDa -0.0723067
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0605209
NLGN1 neuroligin 1 -0.0589965
PDE4D phosphodiesterase 4D, cAMP-specific -0.0546458
GRB10 growth factor receptor-bound protein 10 -0.0545269
DST dystonin -0.0538508
NALF1 NALCN channel auxiliary factor 1 -0.0528346
VIM vimentin -0.0527089
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0519172
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0512359
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0496336
MKI67 marker of proliferation Ki-67 -0.048692
AHNAK AHNAK nucleoprotein -0.0475098
ANKRD11 ankyrin repeat domain 11 -0.0470865
HLA-B major histocompatibility complex, class I, B -0.0467397
CALR calreticulin -0.0461516
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0460927
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0454907
GARS1 glycyl-tRNA synthetase 1 -0.0415689
IGFBP5 insulin-like growth factor binding protein 5 -0.0411391
CENPF centromere protein F, 350/400kDa -0.0409708
ZFAND3 zinc finger, AN1-type domain 3 -0.0409585
POTEF POTE ankyrin domain family, member F -0.0404738
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0385696
IGF2 insulin-like growth factor 2 -0.0374886
FTL ferritin, light polypeptide -0.0352813
TCF12 transcription factor 12 -0.0352026
RPS6 ribosomal protein S6 -0.034287
MT2A metallothionein 2A -0.0336084
VCL vinculin -0.0335357
TPT1 tumor protein, translationally-controlled 1 -0.0332028
H3-3B H3.3 histone B -0.0324828
TNNC1 troponin C type 1 (slow) -0.03119
PRSS23 protease, serine, 23 -0.0302387
SMC4 structural maintenance of chromosomes 4 -0.0301932
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.029803
PRRC2C proline-rich coiled-coil 2C -0.029796
RPL35A ribosomal protein L35a -0.0293978
S100A6 S100 calcium binding protein A6 -0.0291815
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0290582
MAP1B microtubule-associated protein 1B -0.0289076
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0284863
EYA4 EYA transcriptional coactivator and phosphatase 4 -0.0280682
WARS1 tryptophanyl-tRNA synthetase 1 -0.0277497
RTN4 reticulon 4 -0.0275796
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.027528
HLA-A major histocompatibility complex, class I, A -0.0271559
ANLN anillin, actin binding protein -0.0269934
PTPRG protein tyrosine phosphatase, receptor type, G -0.0260474
RPS3 ribosomal protein S3 -0.0253098
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0251465
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0248266
CKAP4 cytoskeleton-associated protein 4 -0.0242881
BAZ1B bromodomain adjacent to zinc finger domain, 1B -0.0242419
LMNA lamin A/C -0.0237894
TUBB tubulin, beta class I -0.0236325
MAP4 microtubule-associated protein 4 -0.023556
GNAS GNAS complex locus -0.0232927
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0231877
NSD2 nuclear receptor binding SET domain protein 2 -0.0231105
PGK1 phosphoglycerate kinase 1 -0.0229657
TPI1 triosephosphate isomerase 1 -0.0229457
RPLP2 ribosomal protein, large, P2 -0.0229119
RPL37 ribosomal protein L37 -0.0228623
LAMB1 laminin, beta 1 -0.022859
CENPE centromere protein E, 312kDa -0.0228455
ATRX alpha thalassemia/mental retardation syndrome X-linked -0.0228202
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0227947
UBE2K ubiquitin-conjugating enzyme E2K -0.0225254
CLMP CXADR-like membrane protein -0.0224888
HIBADH 3-hydroxyisobutyrate dehydrogenase -0.0224061
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough -0.0223863
SEPTIN7 septin 7 -0.0223823
PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 -0.0220186
PKM pyruvate kinase, muscle -0.0217914
CBX3 chromobox homolog 3 -0.0216625
RNF216 ring finger protein 216 -0.0214075
PSD3 pleckstrin and Sec7 domain containing 3 -0.0214054
CAVIN1 caveolae associated protein 1 -0.0212806
SBF2 SET binding factor 2 -0.0209607
COL5A2 collagen, type V, alpha 2 -0.0209372
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0209172
TXNRD1 thioredoxin reductase 1 -0.0208402
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0207866
LYPD6B LY6/PLAUR domain containing 6B -0.0206461
RPL7A ribosomal protein L7a -0.020637
TMED9 transmembrane emp24 protein transport domain containing 9 -0.0206107
KPNB1 karyopherin (importin) beta 1 -0.0206087
CREB5 cAMP responsive element binding protein 5 -0.0205282
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0204431
PDLIM5 PDZ and LIM domain 5 -0.0203875
PTCHD4 patched domain containing 4 -0.0203376
AHCYL1 adenosylhomocysteinase-like 1 -0.0203353
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB -0.0203116