ULK-101_HOP62 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ULK-101 perturbation in HOP62 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ULK-101_HOP62 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HMGA2 high mobility group AT-hook 2 0.24988
CD44 CD44 molecule (Indian blood group) 0.176893
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.13822
TRIO trio Rho guanine nucleotide exchange factor 0.133241
ERRFI1 ERBB receptor feedback inhibitor 1 0.121561
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.117794
STC1 stanniocalcin 1 0.0959951
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0922206
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0810044
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0776081
CXCL8 chemokine (C-X-C motif) ligand 8 0.0738714
AHNAK AHNAK nucleoprotein 0.0702015
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0678887
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0668711
NAV1 neuron navigator 1 0.0625962
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0585577
EGFR epidermal growth factor receptor 0.0583555
JARID2 jumonji, AT rich interactive domain 2 0.0573192
RFX8 RFX family member 8, lacking RFX DNA binding domain 0.0561789
ENO1 enolase 1, (alpha) 0.0538225
ZBTB38 zinc finger and BTB domain containing 38 0.0537965
ASPH aspartate beta-hydroxylase 0.0525882
NALF1 NALCN channel auxiliary factor 1 0.0519418
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0510787
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0508693
EXT1 exostosin glycosyltransferase 1 0.0502146
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0501105
PTPRM protein tyrosine phosphatase, receptor type, M 0.049804
DTNA dystrobrevin, alpha 0.048781
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0484949
MCL1 myeloid cell leukemia 1 0.0483359
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0467406
AKAP12 A kinase (PRKA) anchor protein 12 0.0462497
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0457609
CLMP CXADR-like membrane protein 0.0408727
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0407716
SEPTIN9 septin 9 0.0404865
FNIP1 folliculin interacting protein 1 0.0386318
CLIP2 CAP-GLY domain containing linker protein 2 0.0385512
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0385216
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0381356
DUSP6 dual specificity phosphatase 6 0.0368804
CDCP1 CUB domain containing protein 1 0.0368043
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0363057
INHBA inhibin, beta A 0.0362473
NUMB numb homolog (Drosophila) 0.0359732
DOCK5 dedicator of cytokinesis 5 0.035163
NAV2 neuron navigator 2 0.0346838
EFNA5 ephrin-A5 0.0346072
SMYD3 SET and MYND domain containing 3 0.0340399
GPC5 glypican 5 0.0340037
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0333445
BICD1 bicaudal D homolog 1 (Drosophila) 0.0331292
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0323546
CAPRIN2 caprin family member 2 0.0321592
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.03198
SFTPA2 surfactant protein A2 0.0318535
EMP1 epithelial membrane protein 1 0.031635
SAMD4A sterile alpha motif domain containing 4A 0.0316123
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0312107
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0309868
ZSWIM6 zinc finger, SWIM-type containing 6 0.0304664
ARHGAP22 Rho GTPase activating protein 22 0.0301071
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0300509
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0299818
VMP1 vacuole membrane protein 1 0.0295502
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0291063
COL6A3 collagen, type VI, alpha 3 0.0290053
MYO1D myosin ID 0.0288439
ZFAND3 zinc finger, AN1-type domain 3 0.0288228
RCOR1 REST corepressor 1 0.0284229
CLIC4 chloride intracellular channel 4 0.0283903
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0276361
ANGPTL4 angiopoietin-like 4 0.0274556
CANX calnexin 0.0271059
PRKCA protein kinase C, alpha 0.0265995
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.026262
TBX3 T-box 3 0.0262091
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0260216
LOXL2 lysyl oxidase-like 2 0.025934
HDAC9 histone deacetylase 9 0.0258503
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0255237
MYO10 myosin X 0.025494
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0254337
RND3 Rho family GTPase 3 0.0254143
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0253979
FER fer (fps/fes related) tyrosine kinase 0.0252214
MACF1 microtubule-actin crosslinking factor 1 0.025071
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0250055
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0245789
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0244806
KLF12 Kruppel-like factor 12 0.0244601
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0243586
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0243162
MT1E metallothionein 1E 0.024205
ZNF638 zinc finger protein 638 0.0239801
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0239135
FRMD4A FERM domain containing 4A 0.0238648
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 0.0236641
RASA2 RAS p21 protein activator 2 0.023612

decreased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.118863
PTMA prothymosin, alpha -0.115879
NDRG1 N-myc downstream regulated 1 -0.101903
IGF2 insulin-like growth factor 2 -0.0935397
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0917759
FN1 fibronectin 1 -0.0817871
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0667485
FAM13A family with sequence similarity 13, member A -0.0568092
TMSB10 thymosin beta 10 -0.0513724
TGFBI transforming growth factor, beta-induced, 68kDa -0.0500775
RPL35A ribosomal protein L35a -0.0449307
FTL ferritin, light polypeptide -0.0437438
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0421914
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0413865
COL6A2 collagen, type VI, alpha 2 -0.0358479
GNAS GNAS complex locus -0.0356771
ADM adrenomedullin -0.0352526
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0351566
COL6A1 collagen, type VI, alpha 1 -0.033716
GRB10 growth factor receptor-bound protein 10 -0.0331036
WDR45B WD repeat domain 45B -0.0300703
CALD1 caldesmon 1 -0.029441
WSB1 WD repeat and SOCS box containing 1 -0.0288162
ZNF292 zinc finger protein 292 -0.027676
USP3 ubiquitin specific peptidase 3 -0.0274173
ACTG1 actin gamma 1 -0.0272051
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0264092
CENPF centromere protein F, 350/400kDa -0.025807
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0249625
RLF rearranged L-myc fusion -0.0243764
FAM162A family with sequence similarity 162, member A -0.0240716
TPX2 TPX2, microtubule-associated -0.024001
APOLD1 apolipoprotein L domain containing 1 -0.0238258
QKI QKI, KH domain containing, RNA binding -0.0237799
FLNB filamin B, beta -0.0237616
OGA O-GlcNAcase -0.0236981
PGK1 phosphoglycerate kinase 1 -0.0236717
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0234913
POTEF POTE ankyrin domain family, member F -0.0233364
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 -0.0231049
TPM1 tropomyosin 1 (alpha) -0.0230259
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0226629
TUBB tubulin, beta class I -0.0224123
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.022247
PDIA3 protein disulfide isomerase family A, member 3 -0.0217941
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0213967
ENO2 enolase 2 (gamma, neuronal) -0.0210758
NAMPT nicotinamide phosphoribosyltransferase -0.0208069
COL1A1 collagen, type I, alpha 1 -0.0207567
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0205888
TPT1 tumor protein, translationally-controlled 1 -0.0203424
TENM2 teneurin transmembrane protein 2 -0.0199575
VCL vinculin -0.0197975
TPI1 triosephosphate isomerase 1 -0.0196447
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0195106
IGFBP4 insulin-like growth factor binding protein 4 -0.0192868
MIS18BP1 MIS18 binding protein 1 -0.0192696
CD109 CD109 molecule -0.0191832
MRPS6 mitochondrial ribosomal protein S6 -0.0191787
ADAM9 ADAM metallopeptidase domain 9 -0.0191617
VDAC1 voltage-dependent anion channel 1 -0.0190655
RBM39 RNA binding motif protein 39 -0.0189837
ANKRD11 ankyrin repeat domain 11 -0.0188186
DIAPH3 diaphanous-related formin 3 -0.0184099
ETV6 ets variant 6 -0.0183767
CALR calreticulin -0.0183732
RPL37A ribosomal protein L37a -0.0182803
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0182803
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0182646
SETD5 SET domain containing 5 -0.0181836
RPL9 ribosomal protein L9 -0.0181755
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0181521
KIF4A kinesin family member 4A -0.0178864
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.017855
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0177286
RPLP2 ribosomal protein, large, P2 -0.0176348
COL7A1 collagen, type VII, alpha 1 -0.0175993
CENPE centromere protein E, 312kDa -0.0175633
IBTK inhibitor of Bruton agammaglobulinemia tyrosine kinase -0.0175282
RPS29 ribosomal protein S29 -0.0170726
KCTD9 potassium channel tetramerization domain containing 9 -0.0169249
RNF145 ring finger protein 145 -0.0169186
IGFBP3 insulin-like growth factor binding protein 3 -0.0169113
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase -0.0167537
MT2A metallothionein 2A -0.0166977
SMC4 structural maintenance of chromosomes 4 -0.0165043
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0164589
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A -0.0163945
NKTR natural killer cell triggering receptor -0.0161387
CYB5R3 cytochrome b5 reductase 3 -0.0160421
NPEPPS aminopeptidase puromycin sensitive -0.0160415
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0159818
RIN2 Ras and Rab interactor 2 -0.0158759
PRR11 proline rich 11 -0.0156748
PNISR PNN-interacting serine/arginine-rich protein -0.0156283
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0155743
COL5A1 collagen, type V, alpha 1 -0.0155473
CDC27 cell division cycle 27 -0.0154627
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0153928
RNMT RNA (guanine-7-) methyltransferase -0.0153754