ULK-101_HT-29 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ULK-101 perturbation in HT-29 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ULK-101_HT-29 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.167206
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.150493
FTL ferritin, light polypeptide 0.127092
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0953467
TJP1 tight junction protein 1 0.0826456
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0817891
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0801718
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0746308
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0605048
PTPRK protein tyrosine phosphatase, receptor type, K 0.0575126
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.055348
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0549581
PDIA3 protein disulfide isomerase family A, member 3 0.0541402
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0532479
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.051952
RPS6 ribosomal protein S6 0.0512095
CANX calnexin 0.0510921
B2M beta-2-microglobulin 0.0489643
ARHGAP29 Rho GTPase activating protein 29 0.047748
FOXP1 forkhead box P1 0.0474636
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.046949
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0455469
ATXN1 ataxin 1 0.0442578
EXT1 exostosin glycosyltransferase 1 0.0441968
AKAP13 A kinase (PRKA) anchor protein 13 0.0438989
PTMA prothymosin, alpha 0.0431113
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0429039
EPS8 epidermal growth factor receptor pathway substrate 8 0.0425656
GOLGA4 golgin A4 0.0419633
RPLP0 ribosomal protein, large, P0 0.041751
RPS8 ribosomal protein S8 0.0405849
RPS13 ribosomal protein S13 0.0389853
LYZ lysozyme 0.037271
EGFR epidermal growth factor receptor 0.0372651
CALR calreticulin 0.036304
NTN4 netrin 4 0.0360245
SEC31A SEC31 homolog A (S. cerevisiae) 0.035517
LIMA1 LIM domain and actin binding 1 0.0352806
ARHGAP42 Rho GTPase activating protein 42 0.0352012
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) 0.0351968
PDIA4 protein disulfide isomerase family A, member 4 0.0351067
DST dystonin 0.0338223
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0332605
HDLBP high density lipoprotein binding protein 0.0328798
HYOU1 hypoxia up-regulated 1 0.0323829
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0323132
AFF1 AF4/FMR2 family, member 1 0.0321226
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0318272
PDIA6 protein disulfide isomerase family A, member 6 0.0315069
ENO1 enolase 1, (alpha) 0.0312994
UTRN utrophin 0.0312852
MBNL2 muscleblind-like splicing regulator 2 0.031245
GCC2 GRIP and coiled-coil domain containing 2 0.0310715
KRT18 keratin 18, type I 0.0307791
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0305865
PDE4D phosphodiesterase 4D, cAMP-specific 0.0305101
ASTN2 astrotactin 2 0.0301773
PGK1 phosphoglycerate kinase 1 0.0301769
MYO1E myosin IE 0.030167
SIK3 SIK family kinase 3 0.0299121
RPL27A ribosomal protein L27a 0.0297675
TMC5 transmembrane channel-like 5 0.0294932
EIF1 eukaryotic translation initiation factor 1 0.0292985
PCCA propionyl CoA carboxylase, alpha polypeptide 0.028686
RPL31 ribosomal protein L31 0.0284992
AKAP9 A kinase (PRKA) anchor protein 9 0.0281609
LDHA lactate dehydrogenase A 0.0281357
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0279386
MTDH metadherin 0.0278714
MLEC malectin 0.0277662
RPL23 ribosomal protein L23 0.0277533
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.0274045
RPS3 ribosomal protein S3 0.0271692
PDE10A phosphodiesterase 10A 0.0270431
TRAM1 translocation associated membrane protein 1 0.0268732
RPS16 ribosomal protein S16 0.026538
KPNB1 karyopherin (importin) beta 1 0.026537
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa 0.0263316
FNDC3A fibronectin type III domain containing 3A 0.0262153
COPB1 coatomer protein complex, subunit beta 1 0.0261889
RPLP1 ribosomal protein, large, P1 0.0260828
RACK1 receptor for activated C kinase 1 0.0260235
ERRFI1 ERBB receptor feedback inhibitor 1 0.0259784
UBC ubiquitin C 0.0256436
RPS12 ribosomal protein S12 0.0256062
RPL7 ribosomal protein L7 0.0247017
RPL7A ribosomal protein L7a 0.0245935
TTC3 tetratricopeptide repeat domain 3 0.0245654
ERBIN erbb2 interacting protein 0.0244879
PDZD8 PDZ domain containing 8 0.0240789
RPS23 ribosomal protein S23 0.0240101
HM13 histocompatibility (minor) 13 0.0240088
RPS25 ribosomal protein S25 0.0239766
MYADM myeloid-associated differentiation marker 0.0238723
JMY junction mediating and regulatory protein, p53 cofactor 0.0236253
LCOR ligand dependent nuclear receptor corepressor 0.0231665
RPL12 ribosomal protein L12 0.0229971
KLF5 Kruppel-like factor 5 (intestinal) 0.02265
S100A6 S100 calcium binding protein A6 0.0223891
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0221783

decreased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 -0.0903917
ADARB1 adenosine deaminase, RNA-specific, B1 -0.0847891
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 -0.0714913
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0687421
SLC45A4 solute carrier family 45, member 4 -0.0668693
SAMD12 sterile alpha motif domain containing 12 -0.0656837
PRELID2 PRELI domain containing 2 -0.0634421
ACTN4 actinin, alpha 4 -0.0623764
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0521196
INTS6 integrator complex subunit 6 -0.0437012
GMDS GDP-mannose 4,6-dehydratase -0.0398123
VCL vinculin -0.0395181
TUFT1 tuftelin 1 -0.0378116
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0377459
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0368731
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0360187
KRT8 keratin 8, type II -0.0347929
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0336438
ATAD2 ATPase family, AAA domain containing 2 -0.0332161
TSC22D2 TSC22 domain family, member 2 -0.0313507
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0312127
AHNAK AHNAK nucleoprotein -0.0311498
RBM39 RNA binding motif protein 39 -0.0305525
EZR ezrin -0.0297726
STK24 serine/threonine kinase 24 -0.0295337
MCL1 myeloid cell leukemia 1 -0.0291684
PLEC plectin -0.0280584
SBF2 SET binding factor 2 -0.0275554
TRPS1 trichorhinophalangeal syndrome I -0.0268799
OGA O-GlcNAcase -0.0267034
TRIO trio Rho guanine nucleotide exchange factor -0.0263911
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0254101
ANXA2 annexin A2 -0.0252173
FOXO3 forkhead box O3 -0.0251547
MBD5 methyl-CpG binding domain protein 5 -0.0247494
JUP junction plakoglobin -0.0245972
MYH9 myosin, heavy chain 9, non-muscle -0.0245875
TRIB1 tribbles pseudokinase 1 -0.023748
HOXB3 homeobox B3 -0.0236387
GARS1 glycyl-tRNA synthetase 1 -0.0233084
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0232768
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta -0.0221682
MYO18A myosin XVIIIA -0.0220681
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0220269
IFRD1 interferon-related developmental regulator 1 -0.021902
CCNL1 cyclin L1 -0.0215717
FRY furry homolog (Drosophila) -0.0214187
ANXA11 annexin A11 -0.0212315
GSN gelsolin -0.0209284
SDCBP syndecan binding protein (syntenin) -0.0208738
PCED1B PC-esterase domain containing 1B -0.0207267
NAMPT nicotinamide phosphoribosyltransferase -0.020654
SQSTM1 sequestosome 1 -0.020503
LSR lipolysis stimulated lipoprotein receptor -0.0204751
EGR1 early growth response 1 -0.0203864
BAIAP2 BAI1-associated protein 2 -0.0197721
LASP1 LIM and SH3 protein 1 -0.0196292
MYO1D myosin ID -0.0193943
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0188553
KDM4B lysine (K)-specific demethylase 4B -0.0187215
SPTAN1 spectrin, alpha, non-erythrocytic 1 -0.0186378
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0184258
SERTAD2 SERTA domain containing 2 -0.0183854
LNX2 ligand of numb-protein X 2 -0.0183632
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0183515
NUP98 nucleoporin 98kDa -0.0183039
MTAP methylthioadenosine phosphorylase -0.0181506
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0176628
ITGB4 integrin, beta 4 -0.0176527
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0175485
LPP LIM domain containing preferred translocation partner in lipoma -0.0174066
ITPKC inositol-trisphosphate 3-kinase C -0.017395
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0172719
NCOA2 nuclear receptor coactivator 2 -0.0172479
ANKRD10 ankyrin repeat domain 10 -0.0172252
SH3BP2 SH3-domain binding protein 2 -0.0172127
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 -0.0171784
RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1 -0.0167932
USP53 ubiquitin specific peptidase 53 -0.0167821
CHKA choline kinase alpha -0.0167135
H1-0 H1.0 linker histone -0.0166847
PRKCE protein kinase C, epsilon -0.0166827
ADD1 adducin 1 (alpha) -0.0166424
WDR1 WD repeat domain 1 -0.0166226
HMGB1 high mobility group box 1 -0.0165312
IGF1R insulin-like growth factor 1 receptor -0.016449
ECT2 epithelial cell transforming 2 -0.0163077
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.016306
NECTIN2 nectin cell adhesion molecule 2 -0.0161752
SDC4 syndecan 4 -0.0161254
LMNA lamin A/C -0.0158231
ARHGAP26 Rho GTPase activating protein 26 -0.0157725
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0157078
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit -0.0156745
PDE8A phosphodiesterase 8A -0.0156555
ZBTB20 zinc finger and BTB domain containing 20 -0.0156223
RNF213 ring finger protein 213 -0.0155315
GNAS GNAS complex locus -0.015502
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.0154509
CAPN8 calpain 8 -0.0152898