ULK-101_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ULK-101 perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ULK-101_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.135896
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.118707
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0613239
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0579897
FAT1 FAT atypical cadherin 1 0.0533414
RPS6 ribosomal protein S6 0.0469558
EGFR epidermal growth factor receptor 0.0451205
LMO7 LIM domain 7 0.0434614
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0427015
TPM4 tropomyosin 4 0.0411712
RPS8 ribosomal protein S8 0.0366278
NDRG1 N-myc downstream regulated 1 0.0344596
B2M beta-2-microglobulin 0.0342366
ASPH aspartate beta-hydroxylase 0.033799
MT2A metallothionein 2A 0.0335333
RPL23 ribosomal protein L23 0.0321358
RPS19 ribosomal protein S19 0.0305609
RPLP1 ribosomal protein, large, P1 0.0305495
MYO1E myosin IE 0.0300817
TXNIP thioredoxin interacting protein 0.028852
KTN1 kinectin 1 (kinesin receptor) 0.0284449
PSD3 pleckstrin and Sec7 domain containing 3 0.0271602
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0268921
ENO1 enolase 1, (alpha) 0.0267811
FTL ferritin, light polypeptide 0.0264151
CALR calreticulin 0.025675
AFF1 AF4/FMR2 family, member 1 0.0256725
MED13 mediator complex subunit 13 0.0253985
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0252585
EXT1 exostosin glycosyltransferase 1 0.025095
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0241536
PCBP2 poly(rC) binding protein 2 0.0239954
RPL12 ribosomal protein L12 0.0239807
PKM pyruvate kinase, muscle 0.0235781
MUC6 mucin 6, oligomeric mucus/gel-forming 0.0235425
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0233262
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0231384
RPS23 ribosomal protein S23 0.0228843
RPS25 ribosomal protein S25 0.0228088
S100A10 S100 calcium binding protein A10 0.0227434
RPLP0 ribosomal protein, large, P0 0.0224481
SVIL supervillin 0.0224184
RPS27 ribosomal protein S27 0.0216982
MACF1 microtubule-actin crosslinking factor 1 0.0216913
FNDC3B fibronectin type III domain containing 3B 0.0216419
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0214139
RPS14 ribosomal protein S14 0.021057
SPDYA speedy/RINGO cell cycle regulator family member A 0.0208494
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0208343
TPT1 tumor protein, translationally-controlled 1 0.0206154
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0204661
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0203214
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0200355
ZSWIM6 zinc finger, SWIM-type containing 6 0.0196215
RPL7A ribosomal protein L7a 0.0196131
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.01951
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0193871
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0192149
PTEN phosphatase and tensin homolog 0.0186527
ACTG1 actin gamma 1 0.0182205
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0180551
FBXO11 F-box protein 11 0.0179721
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0179235
PDIA3 protein disulfide isomerase family A, member 3 0.0176777
LDHA lactate dehydrogenase A 0.0176108
EEF1G eukaryotic translation elongation factor 1 gamma 0.0175584
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0175483
MAML3 mastermind-like 3 (Drosophila) 0.0174859
EZR ezrin 0.0174541
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.017404
RPS11 ribosomal protein S11 0.0173419
PDE4D phosphodiesterase 4D, cAMP-specific 0.0173365
RPS16 ribosomal protein S16 0.0173174
AKAP13 A kinase (PRKA) anchor protein 13 0.017314
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 0.0172978
EPS8 epidermal growth factor receptor pathway substrate 8 0.0172672
PTPRK protein tyrosine phosphatase, receptor type, K 0.0172648
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0171318
CEMIP2 cell migration inducing hyaluronidase 2 0.0168168
ISG15 ISG15 ubiquitin-like modifier 0.0167718
APLP2 amyloid beta (A4) precursor-like protein 2 0.0165869
RPS13 ribosomal protein S13 0.0165792
ERBIN erbb2 interacting protein 0.0165337
PGK1 phosphoglycerate kinase 1 0.0165264
RPL15 ribosomal protein L15 0.0162011
TGFBR3 transforming growth factor, beta receptor III 0.0161529
S100A6 S100 calcium binding protein A6 0.0161434
S100A9 S100 calcium binding protein A9 0.0160297
RPL8 ribosomal protein L8 0.0159987
VMP1 vacuole membrane protein 1 0.0159875
AREG amphiregulin 0.015967
VEGFA vascular endothelial growth factor A 0.0157955
JARID2 jumonji, AT rich interactive domain 2 0.0156044
SQSTM1 sequestosome 1 0.0155742
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0150848
RPS4X ribosomal protein S4, X-linked 0.0150603
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0149511
UGCG UDP-glucose ceramide glucosyltransferase 0.0149465
SIK3 SIK family kinase 3 0.0148908
RPL34 ribosomal protein L34 0.0148266

decreased expression

Symbol Name Standardized Value
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0611311
GPHN gephyrin -0.0557504
NPSR1 neuropeptide S receptor 1 -0.0522358
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0399383
VCL vinculin -0.0381823
PIGR polymeric immunoglobulin receptor -0.0357785
CEMIP cell migration inducing protein, hyaluronan binding -0.0318386
NALF1 NALCN channel auxiliary factor 1 -0.031334
NCOR1 nuclear receptor corepressor 1 -0.0309628
FLNB filamin B, beta -0.0306693
NFIA nuclear factor I/A -0.0300632
RNF43 ring finger protein 43 -0.028936
EPCAM epithelial cell adhesion molecule -0.0284578
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0268091
PCDHB16 protocadherin beta 16 -0.0260863
RRBP1 ribosome binding protein 1 -0.0247602
ANXA2 annexin A2 -0.024122
IARS1 isoleucyl-tRNA synthetase 1 -0.0233031
TFRC transferrin receptor -0.0232737
GSK3B glycogen synthase kinase 3 beta -0.023141
TNS4 tensin 4 -0.0229554
SREBF2 sterol regulatory element binding transcription factor 2 -0.0223722
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0223686
ITGA6 integrin, alpha 6 -0.0218393
RBM39 RNA binding motif protein 39 -0.0218124
DERA deoxyribose-phosphate aldolase (putative) -0.0212928
TBC1D22A TBC1 domain family, member 22A -0.0210805
WDR43 WD repeat domain 43 -0.0209213
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 -0.0207429
PRRC2C proline-rich coiled-coil 2C -0.0206348
ETNK1 ethanolamine kinase 1 -0.0205696
GDF15 growth differentiation factor 15 -0.0205258
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.020099
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0199438
ANKRD10 ankyrin repeat domain 10 -0.0198633
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.019775
OGA O-GlcNAcase -0.019705
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0192966
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0192071
KDM3A lysine (K)-specific demethylase 3A -0.0190945
SHROOM3 shroom family member 3 -0.0184043
ACTN4 actinin, alpha 4 -0.0181276
HEPH hephaestin -0.0179767
HDAC2 histone deacetylase 2 -0.0178085
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0176545
PRSS3 protease, serine, 3 -0.0174779
H1-0 H1.0 linker histone -0.0174652
CTBP2 C-terminal binding protein 2 -0.0172838
CAB39 calcium binding protein 39 -0.0172382
ARHGAP32 Rho GTPase activating protein 32 -0.0172066
INSIG1 insulin induced gene 1 -0.0170366
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0169767
SETD5 SET domain containing 5 -0.0168985
TIPARP TCDD-inducible poly(ADP-ribose) polymerase -0.0168811
MYH9 myosin, heavy chain 9, non-muscle -0.0161297
ABHD17C abhydrolase domain containing 17C -0.0160703
MARCHF6 membrane associated ring-CH-type finger 6 -0.0159879
MUC17 mucin 17, cell surface associated -0.0157664
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0155307
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase -0.0154917
TMEM123 transmembrane protein 123 -0.0152905
TKT transketolase -0.0151592
MON2 MON2 homolog (S. cerevisiae) -0.0151006
PNISR PNN-interacting serine/arginine-rich protein -0.0150616
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0150533
PTPN4 protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte) -0.0149791
GARS1 glycyl-tRNA synthetase 1 -0.0149503
SOS1 son of sevenless homolog 1 (Drosophila) -0.0149008
LBR lamin B receptor -0.0145443
EWSR1 EWS RNA-binding protein 1 -0.0145299
MED13L mediator complex subunit 13-like -0.0144918
PKP2 plakophilin 2 -0.0144837
MBD5 methyl-CpG binding domain protein 5 -0.0143977
IER3 immediate early response 3 -0.0142114
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0140884
FAM13A family with sequence similarity 13, member A -0.0140731
NEMF nuclear export mediator factor -0.0139165
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0138655
KIF5B kinesin family member 5B -0.0138063
ROCK2 Rho-associated, coiled-coil containing protein kinase 2 -0.0136981
CD46 CD46 molecule, complement regulatory protein -0.0136506
ATP5F1B ATP synthase F1 subunit beta -0.0136117
RAB1A RAB1A, member RAS oncogene family -0.0135998
WWC1 WW and C2 domain containing 1 -0.0135437
KIAA1217 KIAA1217 -0.0134751
LOC102724023 ES1 protein homolog, mitochondrial -0.0134218
GPA33 glycoprotein A33 (transmembrane) -0.0134186
WDR45B WD repeat domain 45B -0.0133829
PTMA prothymosin, alpha -0.0133782
LIPG lipase, endothelial -0.0133622
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0133581
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0133307
THOC2 THO complex 2 -0.0132736
ETV6 ets variant 6 -0.0132648
FTH1 ferritin, heavy polypeptide 1 -0.0132426
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0131062
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0130928
METTL15 methyltransferase like 15 -0.013026
MECOM MDS1 and EVI1 complex locus -0.0130201
CDK6 cyclin-dependent kinase 6 -0.0128838