ULK-101_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ULK-101 perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ULK-101_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0993494
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0884678
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0849296
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0722551
ADAM10 ADAM metallopeptidase domain 10 0.0686762
ZNF292 zinc finger protein 292 0.0617452
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0558341
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0557301
ZFAND3 zinc finger, AN1-type domain 3 0.0542354
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0535107
KMT2E lysine (K)-specific methyltransferase 2E 0.0491822
EZR ezrin 0.0491693
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.047963
PTMA prothymosin, alpha 0.047524
GOLGA4 golgin A4 0.0475133
NAMPT nicotinamide phosphoribosyltransferase 0.0465011
EML4 echinoderm microtubule associated protein like 4 0.0452098
TXNRD1 thioredoxin reductase 1 0.0447614
RBM39 RNA binding motif protein 39 0.0436345
QKI QKI, KH domain containing, RNA binding 0.0428739
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0425568
KDM3A lysine (K)-specific demethylase 3A 0.0420703
RTN4 reticulon 4 0.0409152
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0407547
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.039751
ZEB1 zinc finger E-box binding homeobox 1 0.0394774
B2M beta-2-microglobulin 0.038099
PDE4D phosphodiesterase 4D, cAMP-specific 0.0379994
NCEH1 neutral cholesterol ester hydrolase 1 0.0372557
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.036708
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0362494
JMJD1C jumonji domain containing 1C 0.0353174
RNF145 ring finger protein 145 0.0352165
MATR3 matrin 3 0.034348
FLNB filamin B, beta 0.0335318
ADAM9 ADAM metallopeptidase domain 9 0.0327274
TXNIP thioredoxin interacting protein 0.0324036
GARS1 glycyl-tRNA synthetase 1 0.0319383
CNOT6L CCR4-NOT transcription complex, subunit 6-like 0.0316127
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0313669
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.0309953
CCNL1 cyclin L1 0.0309073
S100A6 S100 calcium binding protein A6 0.0304357
WAC WW domain containing adaptor with coiled-coil 0.0301498
EEF2 eukaryotic translation elongation factor 2 0.0300479
NUP58 nucleoporin 58 0.0291591
RBM25 RNA binding motif protein 25 0.0289171
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0288043
DSCAM Down syndrome cell adhesion molecule 0.0287035
VMP1 vacuole membrane protein 1 0.0284452
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0279771
PGK1 phosphoglycerate kinase 1 0.0277697
CDC73 cell division cycle 73 0.0277284
USP3 ubiquitin specific peptidase 3 0.0276838
RHOA ras homolog family member A 0.0271607
TMEM41B transmembrane protein 41B 0.0268611
KMT2C lysine (K)-specific methyltransferase 2C 0.0265679
RLF rearranged L-myc fusion 0.0263978
ARID4B AT rich interactive domain 4B (RBP1-like) 0.026225
SSBP2 single-stranded DNA binding protein 2 0.0260702
PICALM phosphatidylinositol binding clathrin assembly protein 0.0258997
HDAC9 histone deacetylase 9 0.0254757
ZNF608 zinc finger protein 608 0.025455
PTBP2 polypyrimidine tract binding protein 2 0.0253321
UBA6 ubiquitin-like modifier activating enzyme 6 0.0252855
TFG TRK-fused gene 0.0250754
PNISR PNN-interacting serine/arginine-rich protein 0.0249856
CRY1 cryptochrome circadian clock 1 0.0249509
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0243815
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0243741
FBXO11 F-box protein 11 0.0242011
BRWD1 bromodomain and WD repeat domain containing 1 0.0239593
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0236653
ATOSA atos homolog A 0.0234028
NCKAP1 NCK-associated protein 1 0.0233651
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0233356
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0231083
ECT2 epithelial cell transforming 2 0.0229832
WDR43 WD repeat domain 43 0.0229293
SRPK2 SRSF protein kinase 2 0.0228856
NCOR1 nuclear receptor corepressor 1 0.0228519
NBAS neuroblastoma amplified sequence 0.0226887
NAP1L1 nucleosome assembly protein 1-like 1 0.0225279
RAB6A RAB6A, member RAS oncogene family 0.0222446
ANKRD11 ankyrin repeat domain 11 0.0220229
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0216713
COPA coatomer protein complex, subunit alpha 0.021087
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0208739
ELOVL5 ELOVL fatty acid elongase 5 0.0207517
MED13 mediator complex subunit 13 0.0206372
EIF4A2 eukaryotic translation initiation factor 4A2 0.0203605
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0200982
KDM2A lysine (K)-specific demethylase 2A 0.0198466
TMSB4X thymosin beta 4, X-linked 0.0195105
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.0192323
UBC ubiquitin C 0.0192271
PUM2 pumilio RNA-binding family member 2 0.0192266
CALU calumenin 0.0189446
ZMYM2 zinc finger, MYM-type 2 0.0188339
POU2F1 POU class 2 homeobox 1 0.0187971

decreased expression

Symbol Name Standardized Value
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.09514
PDE4B phosphodiesterase 4B, cAMP-specific -0.0762416
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0665154
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0534106
NPAS2 neuronal PAS domain protein 2 -0.0393484
MKI67 marker of proliferation Ki-67 -0.0382037
BMP10 bone morphogenetic protein 10 -0.0326457
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0295454
CAMKMT calmodulin-lysine N-methyltransferase -0.0285109
FOXP1 forkhead box P1 -0.0264275
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0255926
DIAPH3 diaphanous-related formin 3 -0.0246453
CRPPA CDP-L-ribitol pyrophosphorylase A -0.0240265
TTC28 tetratricopeptide repeat domain 28 -0.0219449
SMC4 structural maintenance of chromosomes 4 -0.0214458
NAV2 neuron navigator 2 -0.0209304
CENPF centromere protein F, 350/400kDa -0.020692
UNC13A unc-13 homolog A (C. elegans) -0.0206344
TUBB4B tubulin, beta 4B class IVb -0.0205199
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0191731
GLI2 GLI family zinc finger 2 -0.0186483
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 -0.0186146
PDE7B phosphodiesterase 7B -0.0184967
CENPE centromere protein E, 312kDa -0.0181209
GSE1 Gse1 coiled-coil protein -0.017985
PKP4 plakophilin 4 -0.0179554
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0175959
HJURP Holliday junction recognition protein -0.0172529
ITGA10 integrin, alpha 10 -0.0161469
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.015447
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 -0.0151247
ARL4C ADP-ribosylation factor-like 4C -0.0144351
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -0.0143354
PDE10A phosphodiesterase 10A -0.0141798
TPX2 TPX2, microtubule-associated -0.0140588
GOLGB1 golgin B1 -0.0136594
CUX1 cut-like homeobox 1 -0.0136077
RFC3 replication factor C (activator 1) 3, 38kDa -0.0135238
GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 -0.0132646
NEBL nebulette -0.01302
MYO5C myosin VC -0.0129962
SBF2 SET binding factor 2 -0.0129794
ENOX1 ecto-NOX disulfide-thiol exchanger 1 -0.0123386
RAN RAN, member RAS oncogene family -0.012302
PRUNE2 prune homolog 2 (Drosophila) -0.0122446
AHNAK AHNAK nucleoprotein -0.012193
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0118851
DIAPH2 diaphanous-related formin 2 -0.0118839
SCMH1 sex comb on midleg homolog 1 (Drosophila) -0.0118366
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0118053
TUBB tubulin, beta class I -0.0117403
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0117236
CCDC138 coiled-coil domain containing 138 -0.0117144
TUBA1B tubulin, alpha 1b -0.0116216
INTS6 integrator complex subunit 6 -0.011522
FGFR2 fibroblast growth factor receptor 2 -0.0113906
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0113494
PCNX4 pecanex 4 -0.0110269
AMOTL2 angiomotin like 2 -0.0108012
PBX3 pre-B-cell leukemia homeobox 3 -0.0107796
LPP LIM domain containing preferred translocation partner in lipoma -0.0107662
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0107217
RPL31 ribosomal protein L31 -0.0106277
EMP3 epithelial membrane protein 3 -0.0104529
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0104356
ASCC3 activating signal cointegrator 1 complex subunit 3 -0.0102396
EBNA1BP2 EBNA1 binding protein 2 -0.0101646
PRC1 protein regulator of cytokinesis 1 -0.0101459
PATJ PATJ crumbs cell polarity complex component -0.0100867
PA2G4 proliferation-associated 2G4, 38kDa -0.00992635
OBSCN obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF -0.00992025
SUMF1 sulfatase modifying factor 1 -0.00979739
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.00976303
RPL35A ribosomal protein L35a -0.00972122
MLIP muscular LMNA-interacting protein -0.00966079
SDK1 sidekick cell adhesion molecule 1 -0.00958153
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.00955804
NETO2 neuropilin (NRP) and tolloid (TLL)-like 2 -0.00953745
KNL1 kinetochore scaffold 1 -0.00937972
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0093476
CKAP2 cytoskeleton associated protein 2 -0.00929371
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.00927041
EVI5 ecotropic viral integration site 5 -0.00926731
SKI SKI proto-oncogene -0.00917932
MAML2 mastermind-like 2 (Drosophila) -0.00903482
DOCK1 dedicator of cytokinesis 1 -0.00901963
AVEN apoptosis, caspase activation inhibitor -0.00901593
TMBIM1 transmembrane BAX inhibitor motif containing 1 -0.00900129
GOSR1 golgi SNAP receptor complex member 1 -0.00896801
CFAP44 cilia and flagella associated protein 44 -0.00896417
PRSS23 protease, serine, 23 -0.00893921
NUSAP1 nucleolar and spindle associated protein 1 -0.0088467
LRPPRC leucine-rich pentatricopeptide repeat containing -0.00883988
ZNF438 zinc finger protein 438 -0.00879804
ARHGAP11A Rho GTPase activating protein 11A -0.00869283
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.00864716
FMN1 formin 1 -0.0086296
CDK12 cyclin-dependent kinase 12 -0.00861494
MMS22L MMS22-like, DNA repair protein -0.00858906
CEP128 centrosomal protein 128kDa -0.00853169