ULK-101_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ULK-101 perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ULK-101_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SOD2 superoxide dismutase 2, mitochondrial 0.146782
HDAC9 histone deacetylase 9 0.0832045
JMJD1C jumonji domain containing 1C 0.0631042
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0629283
FNDC3B fibronectin type III domain containing 3B 0.0607721
TRIO trio Rho guanine nucleotide exchange factor 0.0592237
ZSWIM6 zinc finger, SWIM-type containing 6 0.0555991
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0544069
RND3 Rho family GTPase 3 0.0540435
KYNU kynureninase 0.0508234
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.047854
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0455464
FNIP1 folliculin interacting protein 1 0.044902
SFTPA2 surfactant protein A2 0.0444883
SQSTM1 sequestosome 1 0.0432676
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0388543
RAB7A RAB7A, member RAS oncogene family 0.038676
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0384781
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0378559
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0371488
CANX calnexin 0.0361088
NAV2 neuron navigator 2 0.0341057
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0318681
VMP1 vacuole membrane protein 1 0.0318038
SMYD3 SET and MYND domain containing 3 0.0313669
GPC6 glypican 6 0.0301461
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0294864
TNS3 tensin 3 0.0293778
USP9X ubiquitin specific peptidase 9, X-linked 0.0285456
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0278326
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0277834
OSBPL8 oxysterol binding protein-like 8 0.0269536
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0265071
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0264065
FMNL2 formin-like 2 0.0261285
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0255969
FBXO32 F-box protein 32 0.0252867
EEF2 eukaryotic translation elongation factor 2 0.0249428
ERBIN erbb2 interacting protein 0.0249155
MACF1 microtubule-actin crosslinking factor 1 0.0245416
ARFGEF3 ARFGEF family member 3 0.0242213
STAG2 stromal antigen 2 0.02418
ZBTB38 zinc finger and BTB domain containing 38 0.0237994
GOLGB1 golgin B1 0.0235411
SPAG9 sperm associated antigen 9 0.0233506
RHOBTB3 Rho-related BTB domain containing 3 0.0230619
CD44 CD44 molecule (Indian blood group) 0.0229515
PPARD peroxisome proliferator-activated receptor delta 0.0228838
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0228341
MYOF myoferlin 0.0226047
DUSP10 dual specificity phosphatase 10 0.0225725
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0217116
C6ORF62 chromosome 6 open reading frame 62 0.0215708
ATXN1 ataxin 1 0.0210005
RB1CC1 RB1-inducible coiled-coil 1 0.0209873
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.020763
CREBRF CREB3 regulatory factor 0.0206837
IGF2R insulin-like growth factor 2 receptor 0.0206553
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0205619
RPL23 ribosomal protein L23 0.0204373
FBXL7 F-box and leucine-rich repeat protein 7 0.020431
BPTF bromodomain PHD finger transcription factor 0.0201897
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0200854
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) 0.0200306
VAC14 Vac14 homolog (S. cerevisiae) 0.0197012
AKAP13 A kinase (PRKA) anchor protein 13 0.0196067
KLHL24 kelch-like family member 24 0.0192571
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0191573
WTAP Wilms tumor 1 associated protein 0.0191245
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0190292
BACE2 beta-site APP-cleaving enzyme 2 0.01894
RASAL2 RAS protein activator like 2 0.0188379
APLP2 amyloid beta (A4) precursor-like protein 2 0.0187157
GOLGA4 golgin A4 0.018253
MBNL2 muscleblind-like splicing regulator 2 0.0182017
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0181655
JAK1 Janus kinase 1 0.0180719
MED13 mediator complex subunit 13 0.018031
HLA-E major histocompatibility complex, class I, E 0.0180293
DST dystonin 0.0179692
ANKHD1 ankyrin repeat and KH domain containing 1 0.0179471
APP amyloid beta (A4) precursor protein 0.0179108
EPAS1 endothelial PAS domain protein 1 0.0179094
ASPH aspartate beta-hydroxylase 0.0178755
SP100 SP100 nuclear antigen 0.0174451
KAT6B K(lysine) acetyltransferase 6B 0.017401
INTS6 integrator complex subunit 6 0.017227
NAMPT nicotinamide phosphoribosyltransferase 0.0170861
MED13L mediator complex subunit 13-like 0.0170282
NT5C2 5'-nucleotidase, cytosolic II 0.0169435
ZHX2 zinc fingers and homeoboxes 2 0.0168603
SERINC3 serine incorporator 3 0.0167057
SDCBP syndecan binding protein (syntenin) 0.0165785
CLTC clathrin, heavy chain (Hc) 0.0165191
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0164133
ZNF638 zinc finger protein 638 0.0164118
AHNAK AHNAK nucleoprotein 0.0161871
ZCCHC7 zinc finger, CCHC domain containing 7 0.0161742
UTRN utrophin 0.0161562
CTSB cathepsin B 0.016051

decreased expression

Symbol Name Standardized Value
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0975514
FN1 fibronectin 1 -0.0690977
FTL ferritin, light polypeptide -0.0525279
TMSB10 thymosin beta 10 -0.0478997
FRMD4A FERM domain containing 4A -0.0474601
MT2A metallothionein 2A -0.0453402
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0422691
HLA-B major histocompatibility complex, class I, B -0.0364853
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0350698
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0287549
TPT1 tumor protein, translationally-controlled 1 -0.0276037
LOC102724023 ES1 protein homolog, mitochondrial -0.0259007
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0247288
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0230561
RPL35A ribosomal protein L35a -0.0220974
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0212953
ZMYND8 zinc finger, MYND-type containing 8 -0.020799
IFITM3 interferon induced transmembrane protein 3 -0.0205017
THBS1 thrombospondin 1 -0.0197485
ADM adrenomedullin -0.0195847
COL1A1 collagen, type I, alpha 1 -0.0194191
IER3 immediate early response 3 -0.0191521
CADM1 cell adhesion molecule 1 -0.0186256
PTMA prothymosin, alpha -0.0179701
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0176768
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0168218
GNAS GNAS complex locus -0.0167765
HLA-A major histocompatibility complex, class I, A -0.0165598
IGFBP3 insulin-like growth factor binding protein 3 -0.0164816
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.016173
UGCG UDP-glucose ceramide glucosyltransferase -0.0161438
PFN1 profilin 1 -0.01536
RPL36 ribosomal protein L36 -0.01515
HMGA1 high mobility group AT-hook 1 -0.0145395
RPLP2 ribosomal protein, large, P2 -0.0143845
MT1X metallothionein 1X -0.0142744
COL1A2 collagen, type I, alpha 2 -0.0142487
SFRP1 secreted frizzled-related protein 1 -0.0140541
CENPF centromere protein F, 350/400kDa -0.0139797
RTN4 reticulon 4 -0.0139394
NDRG1 N-myc downstream regulated 1 -0.0134701
FAM162A family with sequence similarity 162, member A -0.0134272
EGR1 early growth response 1 -0.0134217
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0132597
RPL19 ribosomal protein L19 -0.0132337
LRRC7 leucine rich repeat containing 7 -0.0132234
VIM vimentin -0.0130134
ANLN anillin, actin binding protein -0.0124963
LOX lysyl oxidase -0.0124748
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0124333
TIPARP TCDD-inducible poly(ADP-ribose) polymerase -0.012364
TMEM123 transmembrane protein 123 -0.0123145
IFI6 interferon, alpha-inducible protein 6 -0.0122874
NPEPPS aminopeptidase puromycin sensitive -0.0121719
DLG1 discs, large homolog 1 (Drosophila) -0.0121168
VEGFA vascular endothelial growth factor A -0.0120978
RPS19 ribosomal protein S19 -0.011976
TGFBI transforming growth factor, beta-induced, 68kDa -0.0119337
POTEF POTE ankyrin domain family, member F -0.0119066
PTPRF protein tyrosine phosphatase, receptor type, F -0.0117707
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0117356
CCNL1 cyclin L1 -0.0116937
TUBB tubulin, beta class I -0.0116648
ACTG1 actin gamma 1 -0.011626
DSTN destrin (actin depolymerizing factor) -0.0116152
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0116068
SRGN serglycin -0.0112985
BASP1 brain abundant, membrane attached signal protein 1 -0.0110508
WDR45B WD repeat domain 45B -0.0110243
NACA nascent polypeptide-associated complex alpha subunit -0.011018
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0108536
DEK DEK proto-oncogene -0.0108497
ICAM1 intercellular adhesion molecule 1 -0.0108339
PGK1 phosphoglycerate kinase 1 -0.0107965
FOSL1 FOS-like antigen 1 -0.010697
RPS3 ribosomal protein S3 -0.0104884
INSIG1 insulin induced gene 1 -0.0104788
KRT19 keratin 19, type I -0.0104772
C3 complement component 3 -0.0104336
WSB1 WD repeat and SOCS box containing 1 -0.0103791
MKI67 marker of proliferation Ki-67 -0.0103164
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0103072
TPM1 tropomyosin 1 (alpha) -0.0101896
CAVIN1 caveolae associated protein 1 -0.0101631
IFITM1 interferon induced transmembrane protein 1 -0.0101058
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.00990003
S100A9 S100 calcium binding protein A9 -0.00980345
RPL38 ribosomal protein L38 -0.00977387
DDIT4 DNA-damage-inducible transcript 4 -0.00973906
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.00969839
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.00959066
ERGIC1 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 -0.00958635
TPM4 tropomyosin 4 -0.00956933
DEPP1 DEPP autophagy regulator 1 -0.00951391
RPS21 ribosomal protein S21 -0.00948525
TAPBP TAP binding protein (tapasin) -0.00934542
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.00934491
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -0.00930227
UBE2O ubiquitin-conjugating enzyme E2O -0.00930014
VDAC1 voltage-dependent anion channel 1 -0.0091652