ULK-101_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ULK-101 perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ULK-101_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.175305
FNDC3B fibronectin type III domain containing 3B 0.120392
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.109138
MYH9 myosin, heavy chain 9, non-muscle 0.0984671
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0918441
FAM13A family with sequence similarity 13, member A 0.089357
B2M beta-2-microglobulin 0.0762733
CALR calreticulin 0.0637957
KMT2E lysine (K)-specific methyltransferase 2E 0.0629952
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0592186
CANX calnexin 0.0591503
ZNF395 zinc finger protein 395 0.0570712
HILPDA hypoxia inducible lipid droplet-associated 0.0560006
NDRG1 N-myc downstream regulated 1 0.0522213
EGFR epidermal growth factor receptor 0.0496033
NAMPT nicotinamide phosphoribosyltransferase 0.0469367
LMAN1 lectin, mannose-binding, 1 0.0468984
FNIP1 folliculin interacting protein 1 0.0467586
GOLGA4 golgin A4 0.046261
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0452486
MYO1E myosin IE 0.0444019
ENO1 enolase 1, (alpha) 0.0423809
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0411819
TRA2A transformer 2 alpha homolog (Drosophila) 0.0411279
CCNI cyclin I 0.0410186
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0408084
RYBP RING1 and YY1 binding protein 0.040736
PDIA3 protein disulfide isomerase family A, member 3 0.0406288
FTH1 ferritin, heavy polypeptide 1 0.0404949
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0403791
RPS8 ribosomal protein S8 0.0395975
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0388088
MAGT1 magnesium transporter 1 0.038627
ADM adrenomedullin 0.0382114
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0379057
BIRC3 baculoviral IAP repeat containing 3 0.0377848
WASF2 WAS protein family, member 2 0.0372007
SBF2 SET binding factor 2 0.0370568
SOD2 superoxide dismutase 2, mitochondrial 0.0370393
COPA coatomer protein complex, subunit alpha 0.0365352
PDIA4 protein disulfide isomerase family A, member 4 0.0361797
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 0.035449
SLC41A2 solute carrier family 41 (magnesium transporter), member 2 0.0353181
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 0.0352543
HLA-A major histocompatibility complex, class I, A 0.0351507
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0347595
JMJD1C jumonji domain containing 1C 0.0347472
TTC3 tetratricopeptide repeat domain 3 0.0345947
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0334187
ESYT2 extended synaptotagmin-like protein 2 0.0332858
INSIG2 insulin induced gene 2 0.0329063
PDIA6 protein disulfide isomerase family A, member 6 0.0325143
YAP1 Yes-associated protein 1 0.0322237
KYNU kynureninase 0.0321903
EXT1 exostosin glycosyltransferase 1 0.0315959
ACBD3 acyl-CoA binding domain containing 3 0.0315896
LOC112694756 uncharaterized LOC112694756 0.0314075
RAB1A RAB1A, member RAS oncogene family 0.0313692
CXCL8 chemokine (C-X-C motif) ligand 8 0.0310778
ATP13A3 ATPase type 13A3 0.0308973
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0306928
RPL28 ribosomal protein L28 0.0304697
SEC24D SEC24 family member D 0.0304426
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.030366
RIOK3 RIO kinase 3 0.0303442
SND1 staphylococcal nuclease and tudor domain containing 1 0.0303425
PTGES2 prostaglandin E synthase 2 0.030054
ACTR2 ARP2 actin-related protein 2 homolog (yeast) 0.0297458
YBX1 Y box binding protein 1 0.0297137
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0294472
ZSWIM6 zinc finger, SWIM-type containing 6 0.0291069
PKM pyruvate kinase, muscle 0.0289127
KMT2A lysine (K)-specific methyltransferase 2A 0.0286992
MORF4L2 mortality factor 4 like 2 0.0282598
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0280957
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0277748
SEC24A SEC24 family member A 0.0277174
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0276157
COPB1 coatomer protein complex, subunit beta 1 0.0274095
LIMS1 LIM and senescent cell antigen-like domains 1 0.0272636
SP100 SP100 nuclear antigen 0.0272198
CLIP2 CAP-GLY domain containing linker protein 2 0.0270507
RSRC2 arginine/serine-rich coiled-coil 2 0.0269064
TMF1 TATA element modulatory factor 1 0.0268455
XPO1 exportin 1 0.0267973
HELZ helicase with zinc finger 0.0266423
NIPBL Nipped-B homolog (Drosophila) 0.0265245
SPDYA speedy/RINGO cell cycle regulator family member A 0.0264359
ZNF638 zinc finger protein 638 0.0260487
UBC ubiquitin C 0.0259694
TRIO trio Rho guanine nucleotide exchange factor 0.0258306
PGK1 phosphoglycerate kinase 1 0.0255358
PTN pleiotrophin 0.0254043
ZC3H11A zinc finger CCCH-type containing 11A 0.0253856
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) 0.0253641
DSTN destrin (actin depolymerizing factor) 0.0252945
PRKCA protein kinase C, alpha 0.0250664
CLEC1B C-type lectin domain family 1, member B 0.0248662
SEC31A SEC31 homolog A (S. cerevisiae) 0.0248229
PTMA prothymosin, alpha 0.024678

decreased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 -0.146787
TGFBI transforming growth factor, beta-induced, 68kDa -0.0999665
TMSB10 thymosin beta 10 -0.0993182
GLIS3 GLIS family zinc finger 3 -0.0587413
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.057432
VCL vinculin -0.0530433
MT2A metallothionein 2A -0.0530271
CALD1 caldesmon 1 -0.0506059
FN1 fibronectin 1 -0.0496735
SMAD3 SMAD family member 3 -0.0486305
SRPK2 SRSF protein kinase 2 -0.0465542
COL6A2 collagen, type VI, alpha 2 -0.0446879
HLA-B major histocompatibility complex, class I, B -0.0396928
FSCN1 fascin actin-bundling protein 1 -0.0386733
LOXL2 lysyl oxidase-like 2 -0.0383282
CDK6 cyclin-dependent kinase 6 -0.0379651
NRP1 neuropilin 1 -0.0378769
HMGA2 high mobility group AT-hook 2 -0.0376716
PSD3 pleckstrin and Sec7 domain containing 3 -0.0373631
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0344128
GARS1 glycyl-tRNA synthetase 1 -0.0340544
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0334244
TAGLN2 transgelin 2 -0.033076
COL1A2 collagen, type I, alpha 2 -0.0326571
AHR aryl hydrocarbon receptor -0.0325982
ZEB2 zinc finger E-box binding homeobox 2 -0.0318793
MT1X metallothionein 1X -0.0317388
MBD5 methyl-CpG binding domain protein 5 -0.0317281
RASAL2 RAS protein activator like 2 -0.0315414
TMSB4X thymosin beta 4, X-linked -0.0312878
RBM25 RNA binding motif protein 25 -0.0312023
GLS2 glutaminase 2 (liver, mitochondrial) -0.0304861
ZNF644 zinc finger protein 644 -0.0304313
AOPEP aminopeptidase O (putative) -0.0303186
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0301882
COL7A1 collagen, type VII, alpha 1 -0.0300071
FAM20C family with sequence similarity 20, member C -0.0296017
EFNA5 ephrin-A5 -0.0290543
NCOR1 nuclear receptor corepressor 1 -0.0288252
OGA O-GlcNAcase -0.0288154
ANKRD12 ankyrin repeat domain 12 -0.0286618
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0284885
RPS3 ribosomal protein S3 -0.028014
DENND4A DENN/MADD domain containing 4A -0.0279809
RBMS1 RNA binding motif, single stranded interacting protein 1 -0.0279673
ANTXR2 anthrax toxin receptor 2 -0.0279352
MAPK8 mitogen-activated protein kinase 8 -0.027881
HPCAL1 hippocalcin-like 1 -0.0278195
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0276076
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0272451
FAT1 FAT atypical cadherin 1 -0.0269529
KMT2C lysine (K)-specific methyltransferase 2C -0.0267839
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0262866
C1D C1D nuclear receptor corepressor -0.0262542
NKTR natural killer cell triggering receptor -0.0261434
PXMP2 peroxisomal membrane protein 2, 22kDa -0.0255095
COL1A1 collagen, type I, alpha 1 -0.0254615
TNNC1 troponin C type 1 (slow) -0.0253762
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0253531
PTPN1 protein tyrosine phosphatase, non-receptor type 1 -0.0250453
AHNAK AHNAK nucleoprotein -0.0249279
RRBP1 ribosome binding protein 1 -0.0248098
PCM1 pericentriolar material 1 -0.0246327
COL5A2 collagen, type V, alpha 2 -0.0244337
OSMR oncostatin M receptor -0.0244264
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0240829
GCC2 GRIP and coiled-coil domain containing 2 -0.0238447
TRIM9 tripartite motif containing 9 -0.0237217
FBXW11 F-box and WD repeat domain containing 11 -0.0235226
STC1 stanniocalcin 1 -0.0234637
LUC7L LUC7-like (S. cerevisiae) -0.023161
FKBP10 FK506 binding protein 10, 65 kDa -0.0231514
ANKRD36C ankyrin repeat domain 36C -0.023101
GRIK5 glutamate receptor, ionotropic, kainate 5 -0.022873
PALLD palladin, cytoskeletal associated protein -0.0228097
STK17A serine/threonine kinase 17a -0.022646
ZNF133 zinc finger protein 133 -0.0226363
HIPK2 homeodomain interacting protein kinase 2 -0.0225059
RSU1 Ras suppressor protein 1 -0.0224416
SYNPO synaptopodin -0.0223296
MRTFA myocardin related transcription factor A -0.022195
NPC1 Niemann-Pick disease, type C1 -0.0220533
VPS37A vacuolar protein sorting 37 homolog A (S. cerevisiae) -0.0220045
UBE3A ubiquitin protein ligase E3A -0.0218796
SAMD4A sterile alpha motif domain containing 4A -0.0217573
EIF5B eukaryotic translation initiation factor 5B -0.0217041
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1 -0.0216836
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0216564
UFM1 ubiquitin-fold modifier 1 -0.0212874
ZHX3 zinc fingers and homeoboxes 3 -0.0211307
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0210675
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0210401
DIAPH3 diaphanous-related formin 3 -0.0209604
NRXN3 neurexin 3 -0.0209217
MMP14 matrix metallopeptidase 14 (membrane-inserted) -0.0206349
RAI14 retinoic acid induced 14 -0.0204966
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0204423
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0203836
SUB1 SUB1 homolog (S. cerevisiae) -0.0202804
SERF2 small EDRK-rich factor 2 -0.0201421