ULK-101_SW1417 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ULK-101 perturbation in SW1417 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ULK-101_SW1417 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0901386
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0659243
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0618264
NCEH1 neutral cholesterol ester hydrolase 1 0.0610265
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0597712
FTH1 ferritin, heavy polypeptide 1 0.0538276
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0455837
MYO1E myosin IE 0.0451971
NEBL nebulette 0.0442243
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0438039
BCL2L1 BCL2-like 1 0.0416765
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0409407
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0404253
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0397244
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0394637
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0387292
MAML2 mastermind-like 2 (Drosophila) 0.0369848
FNDC3B fibronectin type III domain containing 3B 0.0355204
RPL12 ribosomal protein L12 0.0351898
RPLP0 ribosomal protein, large, P0 0.0344746
ADAM19 ADAM metallopeptidase domain 19 0.0330707
PCBP2 poly(rC) binding protein 2 0.0314574
AKAP9 A kinase (PRKA) anchor protein 9 0.0312362
NRP1 neuropilin 1 0.0309764
RPS6 ribosomal protein S6 0.030906
PPDPF pancreatic progenitor cell differentiation and proliferation factor 0.0308625
RPL18 ribosomal protein L18 0.0296195
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0291971
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0291111
RPLP1 ribosomal protein, large, P1 0.0288269
EZR ezrin 0.028601
VMP1 vacuole membrane protein 1 0.0284927
EGFR epidermal growth factor receptor 0.0281564
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0281095
SLC38A1 solute carrier family 38, member 1 0.027392
B2M beta-2-microglobulin 0.0271955
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0270977
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0269188
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0264819
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0258721
MAN1A1 mannosidase, alpha, class 1A, member 1 0.024768
TJP1 tight junction protein 1 0.0245825
RPS4X ribosomal protein S4, X-linked 0.0240525
SPDYA speedy/RINGO cell cycle regulator family member A 0.0239774
RALY RALY heterogeneous nuclear ribonucleoprotein 0.0239633
RPL23 ribosomal protein L23 0.0239611
CEMIP cell migration inducing protein, hyaluronan binding 0.0237726
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8 0.0237594
EEF1G eukaryotic translation elongation factor 1 gamma 0.0236325
APLP2 amyloid beta (A4) precursor-like protein 2 0.0235605
SNX9 sorting nexin 9 0.0235384
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0230711
COG5 component of oligomeric golgi complex 5 0.0228428
ZNF292 zinc finger protein 292 0.022718
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.0226684
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0225397
PTPRK protein tyrosine phosphatase, receptor type, K 0.0223103
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 0.0219888
LOC112694756 uncharaterized LOC112694756 0.0218005
LOC102724023 ES1 protein homolog, mitochondrial 0.0216466
HM13 histocompatibility (minor) 13 0.0216067
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B 0.0215358
RCOR1 REST corepressor 1 0.0214073
UBE2H ubiquitin-conjugating enzyme E2H 0.0211705
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0208843
CSNK1A1 casein kinase 1, alpha 1 0.0208178
OSBPL10 oxysterol binding protein-like 10 0.0207946
DOCK4 dedicator of cytokinesis 4 0.0207062
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 0.0203241
TOP1 topoisomerase (DNA) I 0.0202137
SMAD3 SMAD family member 3 0.0201553
RPS8 ribosomal protein S8 0.0198471
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0198012
JUN jun proto-oncogene 0.019799
TES testin LIM domain protein 0.0196471
PGK1 phosphoglycerate kinase 1 0.0196096
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0193591
JMJD1C jumonji domain containing 1C 0.0193449
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0192158
SIK3 SIK family kinase 3 0.0189434
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.01837
KMT5B lysine methyltransferase 5B 0.0183522
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0183488
EXOC4 exocyst complex component 4 0.0182022
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.017893
ERBIN erbb2 interacting protein 0.0177563
ZBTB20 zinc finger and BTB domain containing 20 0.0177488
PKM pyruvate kinase, muscle 0.0176946
CEMIP2 cell migration inducing hyaluronidase 2 0.0176705
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0175099
DIAPH1 diaphanous-related formin 1 0.0174862
PERP PERP, TP53 apoptosis effector 0.0173858
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.017364
RPL27A ribosomal protein L27a 0.017316
EGR1 early growth response 1 0.0172835
SVIL supervillin 0.017203
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0170413
TTC3 tetratricopeptide repeat domain 3 0.0170162
EHBP1 EH domain binding protein 1 0.0170108
SETX senataxin 0.0165952

decreased expression

Symbol Name Standardized Value
H1-0 H1.0 linker histone -0.0320632
RBM39 RNA binding motif protein 39 -0.0317354
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0312133
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0234978
HSPA8 heat shock 70kDa protein 8 -0.0206856
OGA O-GlcNAcase -0.0202224
GARS1 glycyl-tRNA synthetase 1 -0.0195109
PLAUR plasminogen activator, urokinase receptor -0.0192985
RYBP RING1 and YY1 binding protein -0.018098
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.0180053
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0179591
MARCHF6 membrane associated ring-CH-type finger 6 -0.0175505
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0168785
KDM3A lysine (K)-specific demethylase 3A -0.016702
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0165624
PTMA prothymosin, alpha -0.0165145
NKTR natural killer cell triggering receptor -0.0164667
TRA2B transformer 2 beta homolog (Drosophila) -0.0163437
NCKAP1 NCK-associated protein 1 -0.0160896
MAP4 microtubule-associated protein 4 -0.0160007
UBQLN1 ubiquilin 1 -0.0156538
GNAS GNAS complex locus -0.0154052
ZNF706 zinc finger protein 706 -0.0152891
CD46 CD46 molecule, complement regulatory protein -0.0151276
NAMPT nicotinamide phosphoribosyltransferase -0.0149081
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0147954
CCNL1 cyclin L1 -0.0145152
MKI67 marker of proliferation Ki-67 -0.0142503
RNF149 ring finger protein 149 -0.0138596
CCND1 cyclin D1 -0.0134598
RPL6 ribosomal protein L6 -0.0132684
MIS18BP1 MIS18 binding protein 1 -0.0131447
KAT6A K(lysine) acetyltransferase 6A -0.0130205
CNOT4 CCR4-NOT transcription complex, subunit 4 -0.0128736
TMEM47 transmembrane protein 47 -0.0128615
IFIH1 interferon induced with helicase C domain 1 -0.0127789
EPCAM epithelial cell adhesion molecule -0.0127213
RPS2 ribosomal protein S2 -0.0126832
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0126669
PLEC plectin -0.0126541
PRELID2 PRELI domain containing 2 -0.0121976
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme -0.0121391
ZMYM2 zinc finger, MYM-type 2 -0.012041
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked -0.0119876
TCERG1 transcription elongation regulator 1 -0.0118566
XPO1 exportin 1 -0.0118273
RPS21 ribosomal protein S21 -0.0118225
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0117447
MEMO1 mediator of cell motility 1 -0.0114098
SREK1 splicing regulatory glutamine/lysine-rich protein 1 -0.0113602
PRRC2C proline-rich coiled-coil 2C -0.011345
IER3 immediate early response 3 -0.011308
MEF2A myocyte enhancer factor 2A -0.0112992
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0112679
RPRD1B regulation of nuclear pre-mRNA domain containing 1B -0.0111044
ANKRD28 ankyrin repeat domain 28 -0.0110997
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.011097
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0110872
DENND1A DENN/MADD domain containing 1A -0.0110414
FMR1 fragile X mental retardation 1 -0.0109509
USP24 ubiquitin specific peptidase 24 -0.0108229
TXNL1 thioredoxin-like 1 -0.0107735
DLG1 discs, large homolog 1 (Drosophila) -0.0107639
H1-4 H1.4 linker histone, cluster member -0.0107628
RBM25 RNA binding motif protein 25 -0.0107264
SWAP70 SWAP switching B-cell complex 70kDa subunit -0.010552
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.0105256
OSBPL3 oxysterol binding protein-like 3 -0.0104222
PPME1 protein phosphatase methylesterase 1 -0.0103751
CAPRIN1 cell cycle associated protein 1 -0.0103692
TPT1 tumor protein, translationally-controlled 1 -0.0102288
ACTN4 actinin, alpha 4 -0.0102268
TMEM39A transmembrane protein 39A -0.0101883
TFRC transferrin receptor -0.0101179
SETD5 SET domain containing 5 -0.0101095
FLNA filamin A, alpha -0.0100605
DUSP5 dual specificity phosphatase 5 -0.0100555
UGCG UDP-glucose ceramide glucosyltransferase -0.00997992
EIF4H eukaryotic translation initiation factor 4H -0.00990003
NCOR1 nuclear receptor corepressor 1 -0.00988533
RHEB Ras homolog enriched in brain -0.00981247
ZC3H13 zinc finger CCCH-type containing 13 -0.00974124
CKAP5 cytoskeleton associated protein 5 -0.00972377
ADAR adenosine deaminase, RNA-specific -0.00967597
RPL38 ribosomal protein L38 -0.00967531
MSMO1 methylsterol monooxygenase 1 -0.00965003
HACD2 3-hydroxyacyl-CoA dehydratase 2 -0.00960214
RTN4 reticulon 4 -0.00959369
STIP1 stress-induced phosphoprotein 1 -0.00957186
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 -0.00954515
RNF145 ring finger protein 145 -0.00945889
RBM33 RNA binding motif protein 33 -0.00945088
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3 -0.0094436
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.00941515
ANLN anillin, actin binding protein -0.00937868
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.00936953
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.00935908
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.00934923
GADD45A growth arrest and DNA-damage-inducible, alpha -0.00933844
TOP2B topoisomerase (DNA) II beta 180kDa -0.00932206