ULK-101_hTERT-HPNE Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description ULK-101 perturbation in hTERT-HPNE cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the ULK-101_hTERT-HPNE drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
STC1 stanniocalcin 1 0.125574
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.093845
HMGA2 high mobility group AT-hook 2 0.0828596
B2M beta-2-microglobulin 0.0702201
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0677713
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0653683
CXCL8 chemokine (C-X-C motif) ligand 8 0.0639886
SOD2 superoxide dismutase 2, mitochondrial 0.0609327
FNDC3B fibronectin type III domain containing 3B 0.0576211
FNDC3A fibronectin type III domain containing 3A 0.0573273
CD44 CD44 molecule (Indian blood group) 0.0552096
ELL2 elongation factor, RNA polymerase II, 2 0.05443
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0524466
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0463405
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 0.0446272
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0435304
MCL1 myeloid cell leukemia 1 0.0435146
LIMS1 LIM and senescent cell antigen-like domains 1 0.0426493
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0421775
JARID2 jumonji, AT rich interactive domain 2 0.0421527
ZSWIM6 zinc finger, SWIM-type containing 6 0.0420735
CEMIP cell migration inducing protein, hyaluronan binding 0.0419516
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0411933
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0407884
LOX lysyl oxidase 0.0401896
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0382095
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0372695
PABPC1 poly(A) binding protein, cytoplasmic 1 0.037196
TRIO trio Rho guanine nucleotide exchange factor 0.0370617
ARHGAP21 Rho GTPase activating protein 21 0.0365567
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0359374
ANKRD28 ankyrin repeat domain 28 0.0356962
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0353798
NAV2 neuron navigator 2 0.0352918
ZBTB38 zinc finger and BTB domain containing 38 0.034051
VMP1 vacuole membrane protein 1 0.0332756
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.0328965
NAMPT nicotinamide phosphoribosyltransferase 0.032563
SPAG9 sperm associated antigen 9 0.0317551
DSCAM Down syndrome cell adhesion molecule 0.0312839
SLC38A2 solute carrier family 38, member 2 0.029754
MYO10 myosin X 0.0294716
FMNL2 formin-like 2 0.0291624
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0290119
HDAC9 histone deacetylase 9 0.028778
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0283919
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0279185
FNIP1 folliculin interacting protein 1 0.0275008
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0273812
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0269839
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0259032
IL6ST interleukin 6 signal transducer 0.0258119
SQSTM1 sequestosome 1 0.0251872
PCBP2 poly(rC) binding protein 2 0.0250975
ENO1 enolase 1, (alpha) 0.0250723
INTS6 integrator complex subunit 6 0.0248008
LDHA lactate dehydrogenase A 0.023566
VIM vimentin 0.0227999
ANXA5 annexin A5 0.0222302
MT2A metallothionein 2A 0.0218857
RASA2 RAS p21 protein activator 2 0.0217691
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0216332
CLIC4 chloride intracellular channel 4 0.021614
SAMD4A sterile alpha motif domain containing 4A 0.0215606
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0213549
HLA-A major histocompatibility complex, class I, A 0.0212024
DNER delta/notch-like EGF repeat containing 0.0209661
PICALM phosphatidylinositol binding clathrin assembly protein 0.0205656
FTH1 ferritin, heavy polypeptide 1 0.020473
RND3 Rho family GTPase 3 0.0204001
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0203147
MAML2 mastermind-like 2 (Drosophila) 0.0201824
VCL vinculin 0.0201014
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 0.0200285
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0199861
SMYD3 SET and MYND domain containing 3 0.0198707
GK glycerol kinase 0.0198497
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0198331
HLA-E major histocompatibility complex, class I, E 0.01981
SEC31A SEC31 homolog A (S. cerevisiae) 0.0194977
USP34 ubiquitin specific peptidase 34 0.0194336
BRD2 bromodomain containing 2 0.0193965
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.019323
VEGFC vascular endothelial growth factor C 0.019137
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0191289
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0191245
EPAS1 endothelial PAS domain protein 1 0.0191207
CLIP2 CAP-GLY domain containing linker protein 2 0.0190483
FNBP1 formin binding protein 1 0.0189869
SERINC1 serine incorporator 1 0.0189217
HDLBP high density lipoprotein binding protein 0.0188685
KMT2E lysine (K)-specific methyltransferase 2E 0.0187111
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0186328
PRELID2 PRELI domain containing 2 0.0186104
IGFBP7 insulin-like growth factor binding protein 7 0.0185625
EEF2 eukaryotic translation elongation factor 2 0.0185171
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0181054
GOLGA4 golgin A4 0.0180866
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0180566
PNRC1 proline-rich nuclear receptor coactivator 1 0.018053

decreased expression

Symbol Name Standardized Value
COL6A3 collagen, type VI, alpha 3 -0.162142
COL1A1 collagen, type I, alpha 1 -0.156344
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.10077
COL1A2 collagen, type I, alpha 2 -0.0829698
FN1 fibronectin 1 -0.0805049
NALF1 NALCN channel auxiliary factor 1 -0.079449
MMP1 matrix metallopeptidase 1 -0.0720624
PRKG1 protein kinase, cGMP-dependent, type I -0.0719486
COL6A2 collagen, type VI, alpha 2 -0.070259
ADGRB3 adhesion G protein-coupled receptor B3 -0.0578785
AKAP12 A kinase (PRKA) anchor protein 12 -0.0569637
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0560673
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12 -0.0542742
TPT1 tumor protein, translationally-controlled 1 -0.0535055
COL6A1 collagen, type VI, alpha 1 -0.0517171
GREM1 gremlin 1, DAN family BMP antagonist -0.0502443
CAVIN1 caveolae associated protein 1 -0.0501086
TMSB10 thymosin beta 10 -0.0491798
EMP1 epithelial membrane protein 1 -0.0478205
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0455128
OXR1 oxidation resistance 1 -0.0445116
FBN1 fibrillin 1 -0.0383057
TGFBI transforming growth factor, beta-induced, 68kDa -0.0365448
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0344479
PRRX1 paired related homeobox 1 -0.0304064
TFPI2 tissue factor pathway inhibitor 2 -0.0303729
ZEB1 zinc finger E-box binding homeobox 1 -0.0286063
PRSS23 protease, serine, 23 -0.028557
VCAN versican -0.0281512
CDH13 cadherin 13 -0.0279395
KIAA1549L KIAA1549-like -0.0275144
PAPPA pregnancy-associated plasma protein A, pappalysin 1 -0.0269446
RPL35A ribosomal protein L35a -0.0253068
PDE8A phosphodiesterase 8A -0.0250913
RAI14 retinoic acid induced 14 -0.0244222
COL5A3 collagen, type V, alpha 3 -0.0243777
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.0231908
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0230194
CCDC102B coiled-coil domain containing 102B -0.0227565
SEPTIN11 septin 11 -0.0212219
NPTX1 neuronal pentraxin I -0.0195508
ABI3BP ABI family, member 3 (NESH) binding protein -0.0190964
ERGIC1 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 -0.0186959
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0185339
CLMP CXADR-like membrane protein -0.0184779
COL5A1 collagen, type V, alpha 1 -0.0182136
SASH1 SAM and SH3 domain containing 1 -0.0181493
CAV1 caveolin 1, caveolae protein, 22kDa -0.0181103
BAALC brain and acute leukemia, cytoplasmic -0.0179337
HAS2 hyaluronan synthase 2 -0.0177948
LAMB3 laminin, beta 3 -0.0176376
IER3 immediate early response 3 -0.0174297
FTL ferritin, light polypeptide -0.0167338
S100A6 S100 calcium binding protein A6 -0.0164819
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0161999
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.0160754
ITGA11 integrin, alpha 11 -0.0159813
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0157411
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0156538
PTMA prothymosin, alpha -0.0155415
VDAC1 voltage-dependent anion channel 1 -0.0149079
EDNRA endothelin receptor type A -0.0144175
MED13L mediator complex subunit 13-like -0.0138314
MMP14 matrix metallopeptidase 14 (membrane-inserted) -0.013805
CUX1 cut-like homeobox 1 -0.013674
NREP neuronal regeneration related protein -0.0135856
DDR2 discoidin domain receptor tyrosine kinase 2 -0.0135093
PDGFRB platelet-derived growth factor receptor, beta polypeptide -0.0133757
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0133743
TCEAL9 transcription elongation factor A like 9 -0.0132446
SAMD3 sterile alpha motif domain containing 3 -0.0131811
DKK3 dickkopf WNT signaling pathway inhibitor 3 -0.0130904
RPS13 ribosomal protein S13 -0.0129988
KPNB1 karyopherin (importin) beta 1 -0.0128119
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0128104
PRR16 proline rich 16 -0.0128026
CHSY3 chondroitin sulfate synthase 3 -0.0127489
SPRY4 sprouty homolog 4 (Drosophila) -0.0127476
POTEF POTE ankyrin domain family, member F -0.0127302
KCNE4 potassium channel, voltage gated subfamily E regulatory beta subunit 4 -0.0126853
COL3A1 collagen, type III, alpha 1 -0.0124453
ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein-like 2 -0.0124415
RPLP2 ribosomal protein, large, P2 -0.0123849
VEPH1 ventricular zone expressed PH domain-containing 1 -0.0122426
NOTCH3 notch 3 -0.0121642
RPS3 ribosomal protein S3 -0.0121271
NPEPPS aminopeptidase puromycin sensitive -0.0120604
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0119445
CA12 carbonic anhydrase XII -0.0119276
TBX2 T-box 2 -0.0118399
NID2 nidogen 2 (osteonidogen) -0.0117549
SERPINH1 serpin peptidase inhibitor, clade H (heat shock protein 47), member 1, (collagen binding protein 1) -0.0116682
PARVA parvin, alpha -0.0115945
RRBP1 ribosome binding protein 1 -0.0115695
COL27A1 collagen, type XXVII, alpha 1 -0.0115092
CHSY1 chondroitin sulfate synthase 1 -0.0114755
ZFHX3 zinc finger homeobox 3 -0.0114053
CENPF centromere protein F, 350/400kDa -0.0113714
POMP proteasome maturation protein -0.0111682
CREB3L1 cAMP responsive element binding protein 3-like 1 -0.0109441